| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948517
Identifier: 153948517
GI number: 153948517
Start: 1623610
End: 1624554
Strand: Reverse
Name: 153948517
Synonym: YpsIP31758_1384
Alternate gene names: NA
Gene position: 1624554-1623610 (Counterclockwise)
Preceding gene: 153946960
Following gene: 153948208
Centisome position: 34.39
GC content: 35.66
Gene sequence:
>945_bases ATGTATAGTCCATATTTATTTGCACGTGCGTCGGAGTTATTAAGTTTAAGAGAGATTGCAGCCGCTGGTACAAATGTTCA AAAATTATTACCAATACTTGAGCCGGTAAACTCTGATACCTCGAGTCTAATCAGATGCTTAAATGTCTGGAATGGTGATG TCGTTGTTATTCTTAACCCTTATCAGAAAGATTTCTCTAATCATAATAATTTAACCTCTTTAAATCAAGAGTTACAGCCT GTCCTGGCAGCCAGAAATAATATAATTTTAGGTGTACTGGTTCAGCCCGGACTCAATATTCAAGATTTAATTAACTACAT AAATAGTAATGCAAATCATAGGATTGCGTTAATTTATGATAATTCAACGCTAAGAGATGTAGATGTTACTTCTTTGGGTA GTATCGCAGCGATAGATTATCATATTGTTCTGAATAATAGTCTCCCAGCACACCAATTTCAGCTACTTCCAGTAATGAAA GTTATCATTATTAATGACTATTTCCGAAAGCTGGCTAAAAATGCAGATTATAATGGTCCAGAGCCTTTTACAAATTCACA CCTGTTTGTAGGTAATAATTATCTAGGTTTTGGTGATTACACAATTACTGGCAGAGTATTCGAACTAGGAGGGGGGCAAC CGTCTGCTGTAGCCGCTCATTTAGTGTTTAAAGATCTTACGAATAATAATATTTGGATGAAGCATTTCGTTTCCAGCAAT ACCCAAAGGGGGGGAGCTGATGTTGCAACAATGTTTCTTGATATATCAGATCAAATTACTCACTTTGTTCCTAATAATGT AAGTCAGTTCGGTAAAAATATTGGCTTGAACCATTATTACGATTGTAGCCAAAGAAGACATTCGCCCGGACTAGGGAAAA ATAAACAGTATCAGATTACGCACCATATTAGTTTTATGTTAGATGTCCTTAACGGAAGGATATAA
Upstream 100 bases:
>100_bases TGGGATATGCAACACCATTATCAAAAAAACAGAAAGATTATATTGTTAATCTGATGGATTCTAAAGTGGGATCTCATTAA ATGTTAAAAGGAATAGTTGT
Downstream 100 bases:
>100_bases TTTTTCCGAGTACCAATCTAACATTGATCTCCGTGCCTCAAGATATTGTGCATGGTTATAAGTTCCACGGATGGAATTTT TATCAACATGCGCAAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MYSPYLFARASELLSLREIAAAGTNVQKLLPILEPVNSDTSSLIRCLNVWNGDVVVILNPYQKDFSNHNNLTSLNQELQP VLAARNNIILGVLVQPGLNIQDLINYINSNANHRIALIYDNSTLRDVDVTSLGSIAAIDYHIVLNNSLPAHQFQLLPVMK VIIINDYFRKLAKNADYNGPEPFTNSHLFVGNNYLGFGDYTITGRVFELGGGQPSAVAAHLVFKDLTNNNIWMKHFVSSN TQRGGADVATMFLDISDQITHFVPNNVSQFGKNIGLNHYYDCSQRRHSPGLGKNKQYQITHHISFMLDVLNGRI
Sequences:
>Translated_314_residues MYSPYLFARASELLSLREIAAAGTNVQKLLPILEPVNSDTSSLIRCLNVWNGDVVVILNPYQKDFSNHNNLTSLNQELQP VLAARNNIILGVLVQPGLNIQDLINYINSNANHRIALIYDNSTLRDVDVTSLGSIAAIDYHIVLNNSLPAHQFQLLPVMK VIIINDYFRKLAKNADYNGPEPFTNSHLFVGNNYLGFGDYTITGRVFELGGGQPSAVAAHLVFKDLTNNNIWMKHFVSSN TQRGGADVATMFLDISDQITHFVPNNVSQFGKNIGLNHYYDCSQRRHSPGLGKNKQYQITHHISFMLDVLNGRI >Mature_314_residues MYSPYLFARASELLSLREIAAAGTNVQKLLPILEPVNSDTSSLIRCLNVWNGDVVVILNPYQKDFSNHNNLTSLNQELQP VLAARNNIILGVLVQPGLNIQDLINYINSNANHRIALIYDNSTLRDVDVTSLGSIAAIDYHIVLNNSLPAHQFQLLPVMK VIIINDYFRKLAKNADYNGPEPFTNSHLFVGNNYLGFGDYTITGRVFELGGGQPSAVAAHLVFKDLTNNNIWMKHFVSSN TQRGGADVATMFLDISDQITHFVPNNVSQFGKNIGLNHYYDCSQRRHSPGLGKNKQYQITHHISFMLDVLNGRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35050; Mature: 35050
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSPYLFARASELLSLREIAAAGTNVQKLLPILEPVNSDTSSLIRCLNVWNGDVVVILNP CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECC YQKDFSNHNNLTSLNQELQPVLAARNNIILGVLVQPGLNIQDLINYINSNANHRIALIYD HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEC NSTLRDVDVTSLGSIAAIDYHIVLNNSLPAHQFQLLPVMKVIIINDYFRKLAKNADYNGP CCCCCCCCHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EPFTNSHLFVGNNYLGFGDYTITGRVFELGGGQPSAVAAHLVFKDLTNNNIWMKHFVSSN CCCCCCEEEECCCEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCC TQRGGADVATMFLDISDQITHFVPNNVSQFGKNIGLNHYYDCSQRRHSPGLGKNKQYQIT CCCCCCCEEEEEEEHHHHHHHHCCCCHHHHHHHCCCCCEECCHHHCCCCCCCCCCCEEEH HHISFMLDVLNGRI HHHHHHHHHHCCCC >Mature Secondary Structure MYSPYLFARASELLSLREIAAAGTNVQKLLPILEPVNSDTSSLIRCLNVWNGDVVVILNP CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECC YQKDFSNHNNLTSLNQELQPVLAARNNIILGVLVQPGLNIQDLINYINSNANHRIALIYD HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEC NSTLRDVDVTSLGSIAAIDYHIVLNNSLPAHQFQLLPVMKVIIINDYFRKLAKNADYNGP CCCCCCCCHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EPFTNSHLFVGNNYLGFGDYTITGRVFELGGGQPSAVAAHLVFKDLTNNNIWMKHFVSSN CCCCCCEEEECCCEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCC TQRGGADVATMFLDISDQITHFVPNNVSQFGKNIGLNHYYDCSQRRHSPGLGKNKQYQIT CCCCCCCEEEEEEEHHHHHHHHCCCCHHHHHHHCCCCCEECCHHHCCCCCCCCCCCEEEH HHISFMLDVLNGRI HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA