Click here to switch to the map view.

The map label for this gene is yqcA [C]

Identifier: 153948515

GI number: 153948515

Start: 1209675

End: 1210124

Strand: Direct

Name: yqcA [C]

Synonym: YpsIP31758_1008

Alternate gene names: 153948515

Gene position: 1209675-1210124 (Clockwise)

Preceding gene: 153949809

Following gene: 153947133

Centisome position: 25.61

GC content: 50.0

Gene sequence:

>450_bases
ATGGCTCAAGTTGGGATTTTTGTTGGTACTGTCTATGGTAATGCGTTGTTAGTGGCAGAAGAAGCTGAGAACATCTTGAA
AGATCAAGGGCATGAGGTAAAGTTATTTGACGAAGGCACGTTAGAGGACTGGCAGCATTACCGTCAACATTATGTGTTGG
TCATTACCTCAACCACCGGGCAGGGCGATTTCCCAGATAGCATCGCATCACTATTTGTTGCTGTTCGTGATCAGGTGGGG
TTCCAACCCGAGTTACGCTATGGCGTCATTGCGCTCGGCGACAGTAGCTATGATAATTTCTGCGGTGCTGGGCGTACGTT
CGATGAGCTATTGCAGGAGCAGGGCGCGGCACGGATTGGCGAACGGTTAGAGATTGATGCTATTGAGCACTCAGAACCAG
AGGCGATATCTGCGCCATGGGTGGAACAATGGGGGCGTTTGCTTCAGTAA

Upstream 100 bases:

>100_bases
TGGCTGGTCGGGTATTGCCCCTCATCTTGAAAGGGTTGAGTTTCCGCTGACTGCCAGTCAGGATAATGAATAATTTTTTG
GCTACAAAGGAATATCTTTT

Downstream 100 bases:

>100_bases
TCTTTATATCTTGATTTTATTGCGTATTGTGGCAAGTTTCGTTGTCACAATACGTATTCGGTTACCGAGGTTATCATGCC
ACCCCTGATTTAGCGGCCAT

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAQVGIFVGTVYGNALLVAEEAENILKDQGHEVKLFDEGTLEDWQHYRQHYVLVITSTTGQGDFPDSIASLFVAVRDQVG
FQPELRYGVIALGDSSYDNFCGAGRTFDELLQEQGAARIGERLEIDAIEHSEPEAISAPWVEQWGRLLQ

Sequences:

>Translated_149_residues
MAQVGIFVGTVYGNALLVAEEAENILKDQGHEVKLFDEGTLEDWQHYRQHYVLVITSTTGQGDFPDSIASLFVAVRDQVG
FQPELRYGVIALGDSSYDNFCGAGRTFDELLQEQGAARIGERLEIDAIEHSEPEAISAPWVEQWGRLLQ
>Mature_148_residues
AQVGIFVGTVYGNALLVAEEAENILKDQGHEVKLFDEGTLEDWQHYRQHYVLVITSTTGQGDFPDSIASLFVAVRDQVGF
QPELRYGVIALGDSSYDNFCGAGRTFDELLQEQGAARIGERLEIDAIEHSEPEAISAPWVEQWGRLLQ

Specific function: Probable electron transporter [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1789154, Length=148, Percent_Identity=66.2162162162162, Blast_Score=207, Evalue=2e-55,
Organism=Escherichia coli, GI1790181, Length=149, Percent_Identity=32.8859060402685, Blast_Score=85, Evalue=2e-18,
Organism=Escherichia coli, GI1789123, Length=129, Percent_Identity=32.5581395348837, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001094
- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 16572; Mature: 16440

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVGIFVGTVYGNALLVAEEAENILKDQGHEVKLFDEGTLEDWQHYRQHYVLVITSTTG
CCCCEEEEEEECCCEEEEHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHEEEEEEEECCC
QGDFPDSIASLFVAVRDQVGFQPELRYGVIALGDSSYDNFCGAGRTFDELLQEQGAARIG
CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCHHHHC
ERLEIDAIEHSEPEAISAPWVEQWGRLLQ
CCEEEEECCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
AQVGIFVGTVYGNALLVAEEAENILKDQGHEVKLFDEGTLEDWQHYRQHYVLVITSTTG
CCCEEEEEEECCCEEEEHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHEEEEEEEECCC
QGDFPDSIASLFVAVRDQVGFQPELRYGVIALGDSSYDNFCGAGRTFDELLQEQGAARIG
CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCHHHHC
ERLEIDAIEHSEPEAISAPWVEQWGRLLQ
CCEEEEECCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA