| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is rbsK [C]
Identifier: 153948509
GI number: 153948509
Start: 4531912
End: 4532919
Strand: Reverse
Name: rbsK [C]
Synonym: YpsIP31758_4025
Alternate gene names: 153948509
Gene position: 4532919-4531912 (Counterclockwise)
Preceding gene: 153947900
Following gene: 153947634
Centisome position: 95.97
GC content: 53.57
Gene sequence:
>1008_bases ATGATAGAACGCAACGGGATTATTGCCGCCGGTAATATGTTGGTCGACCATGTTCATCAAATTGAGCAATGGCCGCAGCG TGGTTGGCTGGCGGAAATCGTACACAGCGAGCGCTCAACCGGCGGCGCACCGCTTAACGTATTGCTGACGCTGGCCAAAA TGTATACCGGGCTGCCGCTGCAGGCGGTGGGCCTTATTGGCGATGATCATGACGGTGATTACATTATGGCGATGCTCGAC CAGTATCAGGTCAATCGCCAACACGTTCGGCGGACCACCTTGGCTCCAACATCTATGTCACAAGTCATGACCGATCCGAG CGGCCAGCGCACCTTTTTCCACTCTCCAGGCACCAACCGCCTGCTCGACTTGCCCGCTTTCGATGGCCTTGATACATCAT TTAAAATTTTCCATCTTGGCTATCTGCTGTTGCTCGATAGTTTGGATGTGGAAGACACCGAGTACGGTACTCGTAGCGCC AGACTACTGGCGCTGATGTCGCAGCTTGGTTATGAAACCTCCCTCGACTTAGTGTCAAGAGAAGGCGATCCTCGTTATCA TTTACTGGTGACGCCAACGTTGTGCTGGCTGGATTATCTGACCATTAATGAACTGGAGGCTGGCGAGTTAAGCGGGCTGG AGATGCGTCTTGCCGATGGCACCCCGGACGTCCATCATATCGCTCAGGCGGCAAAACAATTACTTGAAGCCGGCGTGCGT CAGCGGGTGGTGATTCACTGCCCGGAAGGTGCATGGGGCGTAGATCATGGGCAGGAGGGGGTATGGGTGCCTTCGTGGAA ACTGGCCCAGGAAGAGATAGTTGGTAGCGTTGGTGCCGGGGATGCCTTTTGCGCTGGCATATTATATGGCTACCATGAAC GCTGGCCGTTAACTGATTGTATTCAATTAGCCCACGCCTGCGCCCGTGCCAATTTACTTTGTGCCAATGCTATTGATGGT GCAAAGCCACTGGCGGAATTAGACGTGTTTATTCGTGAGAACCGTTAA
Upstream 100 bases:
>100_bases GTTCGCCGAGTTGTTCCTGGGGATCGAGGAGGCTATTACTGATGTCGTAGCGCAACAAATGCGAATTTTCGGCAGTTCAG AGCAAATCTGAGAGGATGCC
Downstream 100 bases:
>100_bases ATAAGCCATTACCGCGCATAAGATAGCCCGATGGGGAGAGCGTCTTAAGCCCCATCTTATTAGGCCACATTATTCTAGGC ATGAATAATATCGGCGGCAA
Product: PfkB family kinase
Products: ADP; H+; alpha-D-Ribose 5-phosphate [C]
Alternate protein names: PfkB Domain Protein; Sugar Kinase; PfkB Domain-Containing Protein; Kinase; Myo-Inositol Catabolism; PfkB Family Carbohydrate Kinase; PfkB Family Sugar Kinase; Kinase PfkB Family
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MIERNGIIAAGNMLVDHVHQIEQWPQRGWLAEIVHSERSTGGAPLNVLLTLAKMYTGLPLQAVGLIGDDHDGDYIMAMLD QYQVNRQHVRRTTLAPTSMSQVMTDPSGQRTFFHSPGTNRLLDLPAFDGLDTSFKIFHLGYLLLLDSLDVEDTEYGTRSA RLLALMSQLGYETSLDLVSREGDPRYHLLVTPTLCWLDYLTINELEAGELSGLEMRLADGTPDVHHIAQAAKQLLEAGVR QRVVIHCPEGAWGVDHGQEGVWVPSWKLAQEEIVGSVGAGDAFCAGILYGYHERWPLTDCIQLAHACARANLLCANAIDG AKPLAELDVFIRENR
Sequences:
>Translated_335_residues MIERNGIIAAGNMLVDHVHQIEQWPQRGWLAEIVHSERSTGGAPLNVLLTLAKMYTGLPLQAVGLIGDDHDGDYIMAMLD QYQVNRQHVRRTTLAPTSMSQVMTDPSGQRTFFHSPGTNRLLDLPAFDGLDTSFKIFHLGYLLLLDSLDVEDTEYGTRSA RLLALMSQLGYETSLDLVSREGDPRYHLLVTPTLCWLDYLTINELEAGELSGLEMRLADGTPDVHHIAQAAKQLLEAGVR QRVVIHCPEGAWGVDHGQEGVWVPSWKLAQEEIVGSVGAGDAFCAGILYGYHERWPLTDCIQLAHACARANLLCANAIDG AKPLAELDVFIRENR >Mature_335_residues MIERNGIIAAGNMLVDHVHQIEQWPQRGWLAEIVHSERSTGGAPLNVLLTLAKMYTGLPLQAVGLIGDDHDGDYIMAMLD QYQVNRQHVRRTTLAPTSMSQVMTDPSGQRTFFHSPGTNRLLDLPAFDGLDTSFKIFHLGYLLLLDSLDVEDTEYGTRSA RLLALMSQLGYETSLDLVSREGDPRYHLLVTPTLCWLDYLTINELEAGELSGLEMRLADGTPDVHHIAQAAKQLLEAGVR QRVVIHCPEGAWGVDHGQEGVWVPSWKLAQEEIVGSVGAGDAFCAGILYGYHERWPLTDCIQLAHACARANLLCANAIDG AKPLAELDVFIRENR
Specific function: Ribose metabolism; first step. [C]
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.15 [C]
Molecular weight: Translated: 37046; Mature: 37046
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIERNGIIAAGNMLVDHVHQIEQWPQRGWLAEIVHSERSTGGAPLNVLLTLAKMYTGLPL CCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCE QAVGLIGDDHDGDYIMAMLDQYQVNRQHVRRTTLAPTSMSQVMTDPSGQRTFFHSPGTNR EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCC LLDLPAFDGLDTSFKIFHLGYLLLLDSLDVEDTEYGTRSARLLALMSQLGYETSLDLVSR EEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHC EGDPRYHLLVTPTLCWLDYLTINELEAGELSGLEMRLADGTPDVHHIAQAAKQLLEAGVR CCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC QRVVIHCPEGAWGVDHGQEGVWVPSWKLAQEEIVGSVGAGDAFCAGILYGYHERWPLTDC CEEEEECCCCCCCCCCCCCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHH IQLAHACARANLLCANAIDGAKPLAELDVFIRENR HHHHHHHHHCCEEEECCCCCCCHHHHHHHEEECCC >Mature Secondary Structure MIERNGIIAAGNMLVDHVHQIEQWPQRGWLAEIVHSERSTGGAPLNVLLTLAKMYTGLPL CCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCE QAVGLIGDDHDGDYIMAMLDQYQVNRQHVRRTTLAPTSMSQVMTDPSGQRTFFHSPGTNR EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCC LLDLPAFDGLDTSFKIFHLGYLLLLDSLDVEDTEYGTRSARLLALMSQLGYETSLDLVSR EEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHC EGDPRYHLLVTPTLCWLDYLTINELEAGELSGLEMRLADGTPDVHHIAQAAKQLLEAGVR CCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC QRVVIHCPEGAWGVDHGQEGVWVPSWKLAQEEIVGSVGAGDAFCAGILYGYHERWPLTDC CEEEEECCCCCCCCCCCCCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHH IQLAHACARANLLCANAIDGAKPLAELDVFIRENR HHHHHHHHHCCEEEECCCCCCCHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; D-Ribose [C]
Specific reaction: ATP + D-Ribose --> ADP + H+ + alpha-D-Ribose 5-phosphate [C]
General reaction: Phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA