| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948425
Identifier: 153948425
GI number: 153948425
Start: 953312
End: 954544
Strand: Direct
Name: 153948425
Synonym: YpsIP31758_0794
Alternate gene names: NA
Gene position: 953312-954544 (Clockwise)
Preceding gene: 153947085
Following gene: 153949709
Centisome position: 20.18
GC content: 54.66
Gene sequence:
>1233_bases ATGCCCGTAAAATTAACCACCATTCCCGGCCCATCATTACGCCCTTCGCCGCCAAAGCCATTACGTTGGCTGATTGTATT GCTGGGTCTTACTGCGGCAGGAATATTACTGATGCGTTTTCTGGGGAAACTGCTGGGCAATACCGAGTTCTGGTGGTTTG CCATCGGTATCCCGGTGGTTTTCTGGCTGGTTCTCATGGGAGTTCGTCTGGCGATTTATCTGATGCAGCAGATCCAGGCA AATGCCTGGGATAGACGGCGCGAGCAGGTCATATTGCAGGAAGTTCGCCGTGGGCGTCGGGCGTTACAAATTCTGGCGGC TGAATGCAGTACGGCGCATGATTCTGGCCTGCAATTTACCGGGATAGTTGATGCGTTACTGCGTAATGACAATAAAATTA CTCCTCAGACTGCCTGGAATAGAGAAAGCAGTGTTCGGCACAGTCGGTTACCGGTCACTGAAGGCCTGTCCCCGGAGGCT CGCCTCCTTACCGTGTTTTCTGCTCTGCTGGAAAACTTGGCTGACCCCCTGTCCCTGCTTCCTCCCGACAATACGGTCGC TATTCTGTTGGAGTCTTCTTCATCAGTGTCCAGACCTCGGGTGCAAGCGCTCTGGCAGCAAGCATGGCAGGAGAGCGATA TTTGTCAGCCTACTACGTTGTTATCAGGCGTCGGGTTGAGTGTTATCGACCACTGGCTTGATCACCGTATCAAAGAGAAT GCGCTGTTGTTGGTTGTCGCCGTGCAGATAGCCCCTGAACAACCTGAAATGACCGGAGAGGCTGTGGTGGGGCTGCTATT AGCCAACCGCTTAACGCAGAAAGTGCATACTCCGCTGGCGCTGTTGCATCGTCCGGAATGCACCCCCTCGCAGCAAGAGG CTTTGCAGGCGGGGGTGTTACAGGCGGCTGACTGGGTGCCGTTACCCCCTGATGCCCTACAACATCTCTGGTTGGCCAGG CTATCCGCAGAGAGTGAGGGGTATCGCAGTGCCATCGGTGTTCAGGGCAAAGCGCCGTTAGCCCGCATCACACCCGGCTC AGATGTGCACAATTTTAATGAATTCTTAGGATGTCCTGGATGTGCAGCCCCCTGGCTGGCGATAGCCGCCGCCGCACAGG CCATCGGTCATTCCCCGGTACCACATATGATCCTCAGTGGTGAACAAGGCAGTGACACTGTCTGGAGTACTGTTGTATCC CCTTATGCTTCTCGCAAGGAGAATGAAACGTGA
Upstream 100 bases:
>100_bases TAACTATCTGCGTGTTATCACACTGCATGTGCCAAACACCAGACTAATTACATCATGACAGAATGCTTTCCTCTTCGTTA TTTAATATTCGAGTCCTCTT
Downstream 100 bases:
>100_bases AGCGCATTGCCTTACCGATTAAAAAGCCAGAAGTCTGGTTCTGGATTGTTGCTCTGTTATTTTTGCTGGCGGGTGCCGTG TTGTGCTGGCTGGTCTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MPVKLTTIPGPSLRPSPPKPLRWLIVLLGLTAAGILLMRFLGKLLGNTEFWWFAIGIPVVFWLVLMGVRLAIYLMQQIQA NAWDRRREQVILQEVRRGRRALQILAAECSTAHDSGLQFTGIVDALLRNDNKITPQTAWNRESSVRHSRLPVTEGLSPEA RLLTVFSALLENLADPLSLLPPDNTVAILLESSSSVSRPRVQALWQQAWQESDICQPTTLLSGVGLSVIDHWLDHRIKEN ALLLVVAVQIAPEQPEMTGEAVVGLLLANRLTQKVHTPLALLHRPECTPSQQEALQAGVLQAADWVPLPPDALQHLWLAR LSAESEGYRSAIGVQGKAPLARITPGSDVHNFNEFLGCPGCAAPWLAIAAAAQAIGHSPVPHMILSGEQGSDTVWSTVVS PYASRKENET
Sequences:
>Translated_410_residues MPVKLTTIPGPSLRPSPPKPLRWLIVLLGLTAAGILLMRFLGKLLGNTEFWWFAIGIPVVFWLVLMGVRLAIYLMQQIQA NAWDRRREQVILQEVRRGRRALQILAAECSTAHDSGLQFTGIVDALLRNDNKITPQTAWNRESSVRHSRLPVTEGLSPEA RLLTVFSALLENLADPLSLLPPDNTVAILLESSSSVSRPRVQALWQQAWQESDICQPTTLLSGVGLSVIDHWLDHRIKEN ALLLVVAVQIAPEQPEMTGEAVVGLLLANRLTQKVHTPLALLHRPECTPSQQEALQAGVLQAADWVPLPPDALQHLWLAR LSAESEGYRSAIGVQGKAPLARITPGSDVHNFNEFLGCPGCAAPWLAIAAAAQAIGHSPVPHMILSGEQGSDTVWSTVVS PYASRKENET >Mature_409_residues PVKLTTIPGPSLRPSPPKPLRWLIVLLGLTAAGILLMRFLGKLLGNTEFWWFAIGIPVVFWLVLMGVRLAIYLMQQIQAN AWDRRREQVILQEVRRGRRALQILAAECSTAHDSGLQFTGIVDALLRNDNKITPQTAWNRESSVRHSRLPVTEGLSPEAR LLTVFSALLENLADPLSLLPPDNTVAILLESSSSVSRPRVQALWQQAWQESDICQPTTLLSGVGLSVIDHWLDHRIKENA LLLVVAVQIAPEQPEMTGEAVVGLLLANRLTQKVHTPLALLHRPECTPSQQEALQAGVLQAADWVPLPPDALQHLWLARL SAESEGYRSAIGVQGKAPLARITPGSDVHNFNEFLGCPGCAAPWLAIAAAAQAIGHSPVPHMILSGEQGSDTVWSTVVSP YASRKENET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44872; Mature: 44741
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVKLTTIPGPSLRPSPPKPLRWLIVLLGLTAAGILLMRFLGKLLGNTEFWWFAIGIPVV CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH FWLVLMGVRLAIYLMQQIQANAWDRRREQVILQEVRRGRRALQILAAECSTAHDSGLQFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH GIVDALLRNDNKITPQTAWNRESSVRHSRLPVTEGLSPEARLLTVFSALLENLADPLSLL HHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCC PPDNTVAILLESSSSVSRPRVQALWQQAWQESDICQPTTLLSGVGLSVIDHWLDHRIKEN CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCC ALLLVVAVQIAPEQPEMTGEAVVGLLLANRLTQKVHTPLALLHRPECTPSQQEALQAGVL CEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHH QAADWVPLPPDALQHLWLARLSAESEGYRSAIGVQGKAPLARITPGSDVHNFNEFLGCPG HHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEECCCCCCHHHHHHHHCCCC CAAPWLAIAAAAQAIGHSPVPHMILSGEQGSDTVWSTVVSPYASRKENET CHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PVKLTTIPGPSLRPSPPKPLRWLIVLLGLTAAGILLMRFLGKLLGNTEFWWFAIGIPVV CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH FWLVLMGVRLAIYLMQQIQANAWDRRREQVILQEVRRGRRALQILAAECSTAHDSGLQFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH GIVDALLRNDNKITPQTAWNRESSVRHSRLPVTEGLSPEARLLTVFSALLENLADPLSLL HHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCC PPDNTVAILLESSSSVSRPRVQALWQQAWQESDICQPTTLLSGVGLSVIDHWLDHRIKEN CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCC ALLLVVAVQIAPEQPEMTGEAVVGLLLANRLTQKVHTPLALLHRPECTPSQQEALQAGVL CEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHH QAADWVPLPPDALQHLWLARLSAESEGYRSAIGVQGKAPLARITPGSDVHNFNEFLGCPG HHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEECCCCCCHHHHHHHHCCCC CAAPWLAIAAAAQAIGHSPVPHMILSGEQGSDTVWSTVVSPYASRKENET CHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA