| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948336
Identifier: 153948336
GI number: 153948336
Start: 3111543
End: 3112004
Strand: Reverse
Name: 153948336
Synonym: YpsIP31758_2759
Alternate gene names: NA
Gene position: 3112004-3111543 (Counterclockwise)
Preceding gene: 153947134
Following gene: 153949413
Centisome position: 65.89
GC content: 48.48
Gene sequence:
>462_bases ATGAAGTTACCGGTGCCACCGTTTTCACATGAAAGTGCGACAGAAAAAGTCCGTTTGGCTGAAGATGCGTGGAATAGTCG TGATCCCAAACGGGTCTCTCAGGTCTATTCTATTGATACTCATTGGCGCAATCGGGCCGAATTTGTGCATGGCCGTGATG CTGTGGTCGATTTTCTCAGCAGAAAATGGGCTAACGAACTTGAATATCGGCTAATTAAGGAACTTTGGGCCTTCGATGGT GCGCGTATTGCGGTGCGGTTTGCCTATGAGTGGCGTGATGATTCTGGAAATTGGTTCCGTAGTTTTGGTAACGAGAATTG GGAATTTAACGCACAAGGGTTAATGTTTGCCCGCCATGCGTGCATTAACGACATGCCAATTACAGAACAGGATCGCCAAT TTCACTGGCCACTGGGGCGGCGGCCTGATGACTATCCCGCCCTGAGTGATTTGGGTTTTTAA
Upstream 100 bases:
>100_bases TAAGAAGTGCACAAAGAGTGTAGACAAATCTGTCTACATCGGCTAGATTTATTTGAGTAGACAGATCTGTCTACTCAAAT AAATACTGAGGATTTTATCC
Downstream 100 bases:
>100_bases TATTTCCGCTATAGTGGCGTGCTTCAGTTGTTTATCTCACTCACTTTTTTCCAAATGTCTGTTTCTACATCCGGGAGGAA CGGAGATGTGTAGCAACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKLPVPPFSHESATEKVRLAEDAWNSRDPKRVSQVYSIDTHWRNRAEFVHGRDAVVDFLSRKWANELEYRLIKELWAFDG ARIAVRFAYEWRDDSGNWFRSFGNENWEFNAQGLMFARHACINDMPITEQDRQFHWPLGRRPDDYPALSDLGF
Sequences:
>Translated_153_residues MKLPVPPFSHESATEKVRLAEDAWNSRDPKRVSQVYSIDTHWRNRAEFVHGRDAVVDFLSRKWANELEYRLIKELWAFDG ARIAVRFAYEWRDDSGNWFRSFGNENWEFNAQGLMFARHACINDMPITEQDRQFHWPLGRRPDDYPALSDLGF >Mature_153_residues MKLPVPPFSHESATEKVRLAEDAWNSRDPKRVSQVYSIDTHWRNRAEFVHGRDAVVDFLSRKWANELEYRLIKELWAFDG ARIAVRFAYEWRDDSGNWFRSFGNENWEFNAQGLMFARHACINDMPITEQDRQFHWPLGRRPDDYPALSDLGF
Specific function: Unknown
COG id: COG3558
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18192; Mature: 18192
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPVPPFSHESATEKVRLAEDAWNSRDPKRVSQVYSIDTHWRNRAEFVHGRDAVVDFLS CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCHHHHHCCHHHHHHHHH RKWANELEYRLIKELWAFDGARIAVRFAYEWRDDSGNWFRSFGNENWEFNAQGLMFARHA HHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHCCCCCCEECCCCHHHHHHH CINDMPITEQDRQFHWPLGRRPDDYPALSDLGF HCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLPVPPFSHESATEKVRLAEDAWNSRDPKRVSQVYSIDTHWRNRAEFVHGRDAVVDFLS CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCHHHHHCCHHHHHHHHH RKWANELEYRLIKELWAFDGARIAVRFAYEWRDDSGNWFRSFGNENWEFNAQGLMFARHA HHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHCCCCCCEECCCCHHHHHHH CINDMPITEQDRQFHWPLGRRPDDYPALSDLGF HCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA