Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

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The map label for this gene is 153948309

Identifier: 153948309

GI number: 153948309

Start: 4519967

End: 4520791

Strand: Reverse

Name: 153948309

Synonym: YpsIP31758_4012

Alternate gene names: NA

Gene position: 4520791-4519967 (Counterclockwise)

Preceding gene: 153949606

Following gene: 153948739

Centisome position: 95.71

GC content: 47.88

Gene sequence:

>825_bases
ATGGGTGATGGTTTAGTTATTGCGATGTCTCCTGTTCAGTTAGCCGCTGTACTTTCTGATAAAACTATTACAGAAGGTGA
AACACTCGGTAATCGAATGTGGGGTAGTCTGGAGTTTGCTTTAGGTGCACTTGAAATGGTCGGGGCGGCAGTGCTCTGTG
TTGCACCAGAGCCAACCGGGTTAACGAAAGTAGGGTGTGTGGTCGTTGGTGCTCACAGCATGGATGCAGTAAATACCGCG
GCTAACAAAGTGATTACGGGAATGAATACCCGTACCGCGACGCACAGGACAGCAGAAGCACTGGCGAAGAAATTTGGTGC
CGATGAAGATACGGCGTTCAGGATTGGCCTTACCGTTGATATCGCCGTTCCGCTTGGATTTGCGGCTGCACTTGGTGCGG
TAAGAGTGGCCTCTATACGCTCTGGAAGGATTAGCCTCCTTAAACATGAATCTTCAACGGGGATGAAACCGGGCGGGCAT
ACTATAGATAAACATGTCGCTAAGTCACCAGAAGACCTGATAAAAAGATTTGCCAGCTCCCCCAATATGAAGGTCTCAAC
CTCATTTACCAATTTACGACTTGCCGAAGAAAGTATTTCCGATGCGCTAAGATACAACACTGAATGGATTAAAGTCTGGG
CGGCAAGTTCGACGAGGACAGCATCACCCTTTGTTATTAATCACTCTGTGGGGCGTGTTATTGGATATGGGGTAAGGCGC
GGGGAACAGGCCGTAACCAAATTAACAAAATTTAGGGTAGTCATTCGGTTTGAGGCATTCCACGGCAAACCATACTATAT
TCTTACCGCTTACCCCACGTTTTAG

Upstream 100 bases:

>100_bases
GAAGGCTCTTGGTCTCATTTTAAAACAGGCATGATGGTGTAACGTATACCGATCATTTACTATTCCCTTGAAATGTATTT
TCTCAATGGATGAGGGTGTT

Downstream 100 bases:

>100_bases
AGACGGTACAATGAAAATAATGGGTAATTTTTCGGCACTAGAGCACCTGATACAAATTTATTTTGGACAGGATTATTATG
AAATTACAGGGGCTACAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MGDGLVIAMSPVQLAAVLSDKTITEGETLGNRMWGSLEFALGALEMVGAAVLCVAPEPTGLTKVGCVVVGAHSMDAVNTA
ANKVITGMNTRTATHRTAEALAKKFGADEDTAFRIGLTVDIAVPLGFAAALGAVRVASIRSGRISLLKHESSTGMKPGGH
TIDKHVAKSPEDLIKRFASSPNMKVSTSFTNLRLAEESISDALRYNTEWIKVWAASSTRTASPFVINHSVGRVIGYGVRR
GEQAVTKLTKFRVVIRFEAFHGKPYYILTAYPTF

Sequences:

>Translated_274_residues
MGDGLVIAMSPVQLAAVLSDKTITEGETLGNRMWGSLEFALGALEMVGAAVLCVAPEPTGLTKVGCVVVGAHSMDAVNTA
ANKVITGMNTRTATHRTAEALAKKFGADEDTAFRIGLTVDIAVPLGFAAALGAVRVASIRSGRISLLKHESSTGMKPGGH
TIDKHVAKSPEDLIKRFASSPNMKVSTSFTNLRLAEESISDALRYNTEWIKVWAASSTRTASPFVINHSVGRVIGYGVRR
GEQAVTKLTKFRVVIRFEAFHGKPYYILTAYPTF
>Mature_273_residues
GDGLVIAMSPVQLAAVLSDKTITEGETLGNRMWGSLEFALGALEMVGAAVLCVAPEPTGLTKVGCVVVGAHSMDAVNTAA
NKVITGMNTRTATHRTAEALAKKFGADEDTAFRIGLTVDIAVPLGFAAALGAVRVASIRSGRISLLKHESSTGMKPGGHT
IDKHVAKSPEDLIKRFASSPNMKVSTSFTNLRLAEESISDALRYNTEWIKVWAASSTRTASPFVINHSVGRVIGYGVRRG
EQAVTKLTKFRVVIRFEAFHGKPYYILTAYPTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29238; Mature: 29107

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDGLVIAMSPVQLAAVLSDKTITEGETLGNRMWGSLEFALGALEMVGAAVLCVAPEPTG
CCCCEEEEECHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC
LTKVGCVVVGAHSMDAVNTAANKVITGMNTRTATHRTAEALAKKFGADEDTAFRIGLTVD
CEEEEEEEEECCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEE
IAVPLGFAAALGAVRVASIRSGRISLLKHESSTGMKPGGHTIDKHVAKSPEDLIKRFASS
EECHHHHHHHHHHHHEEHCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHCC
PNMKVSTSFTNLRLAEESISDALRYNTEWIKVWAASSTRTASPFVINHSVGRVIGYGVRR
CCCEEEECCCCEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCHHHHHHHHHCC
GEQAVTKLTKFRVVIRFEAFHGKPYYILTAYPTF
HHHHHHHHHHEEEEEEEEEECCCEEEEEEECCCC
>Mature Secondary Structure 
GDGLVIAMSPVQLAAVLSDKTITEGETLGNRMWGSLEFALGALEMVGAAVLCVAPEPTG
CCCEEEEECHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC
LTKVGCVVVGAHSMDAVNTAANKVITGMNTRTATHRTAEALAKKFGADEDTAFRIGLTVD
CEEEEEEEEECCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEE
IAVPLGFAAALGAVRVASIRSGRISLLKHESSTGMKPGGHTIDKHVAKSPEDLIKRFASS
EECHHHHHHHHHHHHEEHCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHCC
PNMKVSTSFTNLRLAEESISDALRYNTEWIKVWAASSTRTASPFVINHSVGRVIGYGVRR
CCCEEEECCCCEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCHHHHHHHHHCC
GEQAVTKLTKFRVVIRFEAFHGKPYYILTAYPTF
HHHHHHHHHHEEEEEEEEEECCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA