| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948309
Identifier: 153948309
GI number: 153948309
Start: 4519967
End: 4520791
Strand: Reverse
Name: 153948309
Synonym: YpsIP31758_4012
Alternate gene names: NA
Gene position: 4520791-4519967 (Counterclockwise)
Preceding gene: 153949606
Following gene: 153948739
Centisome position: 95.71
GC content: 47.88
Gene sequence:
>825_bases ATGGGTGATGGTTTAGTTATTGCGATGTCTCCTGTTCAGTTAGCCGCTGTACTTTCTGATAAAACTATTACAGAAGGTGA AACACTCGGTAATCGAATGTGGGGTAGTCTGGAGTTTGCTTTAGGTGCACTTGAAATGGTCGGGGCGGCAGTGCTCTGTG TTGCACCAGAGCCAACCGGGTTAACGAAAGTAGGGTGTGTGGTCGTTGGTGCTCACAGCATGGATGCAGTAAATACCGCG GCTAACAAAGTGATTACGGGAATGAATACCCGTACCGCGACGCACAGGACAGCAGAAGCACTGGCGAAGAAATTTGGTGC CGATGAAGATACGGCGTTCAGGATTGGCCTTACCGTTGATATCGCCGTTCCGCTTGGATTTGCGGCTGCACTTGGTGCGG TAAGAGTGGCCTCTATACGCTCTGGAAGGATTAGCCTCCTTAAACATGAATCTTCAACGGGGATGAAACCGGGCGGGCAT ACTATAGATAAACATGTCGCTAAGTCACCAGAAGACCTGATAAAAAGATTTGCCAGCTCCCCCAATATGAAGGTCTCAAC CTCATTTACCAATTTACGACTTGCCGAAGAAAGTATTTCCGATGCGCTAAGATACAACACTGAATGGATTAAAGTCTGGG CGGCAAGTTCGACGAGGACAGCATCACCCTTTGTTATTAATCACTCTGTGGGGCGTGTTATTGGATATGGGGTAAGGCGC GGGGAACAGGCCGTAACCAAATTAACAAAATTTAGGGTAGTCATTCGGTTTGAGGCATTCCACGGCAAACCATACTATAT TCTTACCGCTTACCCCACGTTTTAG
Upstream 100 bases:
>100_bases GAAGGCTCTTGGTCTCATTTTAAAACAGGCATGATGGTGTAACGTATACCGATCATTTACTATTCCCTTGAAATGTATTT TCTCAATGGATGAGGGTGTT
Downstream 100 bases:
>100_bases AGACGGTACAATGAAAATAATGGGTAATTTTTCGGCACTAGAGCACCTGATACAAATTTATTTTGGACAGGATTATTATG AAATTACAGGGGCTACAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MGDGLVIAMSPVQLAAVLSDKTITEGETLGNRMWGSLEFALGALEMVGAAVLCVAPEPTGLTKVGCVVVGAHSMDAVNTA ANKVITGMNTRTATHRTAEALAKKFGADEDTAFRIGLTVDIAVPLGFAAALGAVRVASIRSGRISLLKHESSTGMKPGGH TIDKHVAKSPEDLIKRFASSPNMKVSTSFTNLRLAEESISDALRYNTEWIKVWAASSTRTASPFVINHSVGRVIGYGVRR GEQAVTKLTKFRVVIRFEAFHGKPYYILTAYPTF
Sequences:
>Translated_274_residues MGDGLVIAMSPVQLAAVLSDKTITEGETLGNRMWGSLEFALGALEMVGAAVLCVAPEPTGLTKVGCVVVGAHSMDAVNTA ANKVITGMNTRTATHRTAEALAKKFGADEDTAFRIGLTVDIAVPLGFAAALGAVRVASIRSGRISLLKHESSTGMKPGGH TIDKHVAKSPEDLIKRFASSPNMKVSTSFTNLRLAEESISDALRYNTEWIKVWAASSTRTASPFVINHSVGRVIGYGVRR GEQAVTKLTKFRVVIRFEAFHGKPYYILTAYPTF >Mature_273_residues GDGLVIAMSPVQLAAVLSDKTITEGETLGNRMWGSLEFALGALEMVGAAVLCVAPEPTGLTKVGCVVVGAHSMDAVNTAA NKVITGMNTRTATHRTAEALAKKFGADEDTAFRIGLTVDIAVPLGFAAALGAVRVASIRSGRISLLKHESSTGMKPGGHT IDKHVAKSPEDLIKRFASSPNMKVSTSFTNLRLAEESISDALRYNTEWIKVWAASSTRTASPFVINHSVGRVIGYGVRRG EQAVTKLTKFRVVIRFEAFHGKPYYILTAYPTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29238; Mature: 29107
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDGLVIAMSPVQLAAVLSDKTITEGETLGNRMWGSLEFALGALEMVGAAVLCVAPEPTG CCCCEEEEECHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC LTKVGCVVVGAHSMDAVNTAANKVITGMNTRTATHRTAEALAKKFGADEDTAFRIGLTVD CEEEEEEEEECCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEE IAVPLGFAAALGAVRVASIRSGRISLLKHESSTGMKPGGHTIDKHVAKSPEDLIKRFASS EECHHHHHHHHHHHHEEHCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHCC PNMKVSTSFTNLRLAEESISDALRYNTEWIKVWAASSTRTASPFVINHSVGRVIGYGVRR CCCEEEECCCCEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCHHHHHHHHHCC GEQAVTKLTKFRVVIRFEAFHGKPYYILTAYPTF HHHHHHHHHHEEEEEEEEEECCCEEEEEEECCCC >Mature Secondary Structure GDGLVIAMSPVQLAAVLSDKTITEGETLGNRMWGSLEFALGALEMVGAAVLCVAPEPTG CCCEEEEECHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC LTKVGCVVVGAHSMDAVNTAANKVITGMNTRTATHRTAEALAKKFGADEDTAFRIGLTVD CEEEEEEEEECCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEE IAVPLGFAAALGAVRVASIRSGRISLLKHESSTGMKPGGHTIDKHVAKSPEDLIKRFASS EECHHHHHHHHHHHHEEHCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHCC PNMKVSTSFTNLRLAEESISDALRYNTEWIKVWAASSTRTASPFVINHSVGRVIGYGVRR CCCEEEECCCCEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCHHHHHHHHHCC GEQAVTKLTKFRVVIRFEAFHGKPYYILTAYPTF HHHHHHHHHHEEEEEEEEEECCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA