| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948263
Identifier: 153948263
GI number: 153948263
Start: 438485
End: 439297
Strand: Direct
Name: 153948263
Synonym: YpsIP31758_0379
Alternate gene names: NA
Gene position: 438485-439297 (Clockwise)
Preceding gene: 153950852
Following gene: 153948401
Centisome position: 9.28
GC content: 52.89
Gene sequence:
>813_bases ATGTCTGCATCCCATGAGAATTACCGGATTTTTGCTATCAAGTACGCTCATCACCACCGGCTAACCCGCGATAACTTTCT GGGGGGAGATCCACACGACGGGCCGATGCCGATTGACTATTTTGTCTGGGCCATCGTAGGGACCACGCGCACGATTATGG TTGATACCGGATTTGATGCTGCCATGGCCCGTCAGCGTGGCCGGACCATCACGCATTGCATTGAAGACGGTCTGAGCCAA CTTGGCATTGATGCGGGAAAGATTGAAGACGTCATTATTTCGCATATGCACTATGACCATGCGGGTAATCACGGATTGTT TCCCAACGCGCGTTTTCATCTTCAGGATCGTGAGATGGCGTTTTGTACTGGCCGCTGTATGGGCCATCACGGCTTAAGTC AGGCTTTTGATGTAGAAGATGTTAAAGCGATGGTAGGGAGGCTATTCGCTGGGCGTCTACAGTTTCACCATGGGGATGCC GAGATTGCCCCCGGTATCAGTGTTCACCGTGTCGGTGGGCACACTGACGGCTTACAAATCATACGAGTACACACCGCCCG TGGCTGGGTGGTGTTGGCATCGGATGCCACGCATTTCTACGCTAATATTCAGCAACGCCGGCCTTATCCAATCCTTTATA ACGTTGGCGATGTCTTGGAAGGCTACAACACACTTTATCGCTGGGCCGATTCATTCGACCATATTATTCCCGGACATGAT CCGATGGTGTTGCAACGTTACCCAGCGGGCACGCCGGAAACGGCCGCATGGATCGCTCAGGTTGATGTTGCCCCCCTCAC TCAGTGGACGTGA
Upstream 100 bases:
>100_bases TATGGCTATAGGTGGACGTGAAGACGTGGCTGTAAACCGTTATCGGTGAAGTATTGCCCGCATTGGCAGGCATAGGCCGT TTGACATGGAGAACCGCGAT
Downstream 100 bases:
>100_bases AATGTATTTCAGCCGAACGGATTAAATGCGTGCTCTGGCGACCAATAACGATTAAGGGGGTCAGATGAAACAACTACAAC GTATTGGTTTTATTGGTTTG
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Family Protein; Hydrolase; Metal Dependent Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolases Including Glyoxylases; Beta-Lactamase Class B
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSASHENYRIFAIKYAHHHRLTRDNFLGGDPHDGPMPIDYFVWAIVGTTRTIMVDTGFDAAMARQRGRTITHCIEDGLSQ LGIDAGKIEDVIISHMHYDHAGNHGLFPNARFHLQDREMAFCTGRCMGHHGLSQAFDVEDVKAMVGRLFAGRLQFHHGDA EIAPGISVHRVGGHTDGLQIIRVHTARGWVVLASDATHFYANIQQRRPYPILYNVGDVLEGYNTLYRWADSFDHIIPGHD PMVLQRYPAGTPETAAWIAQVDVAPLTQWT
Sequences:
>Translated_270_residues MSASHENYRIFAIKYAHHHRLTRDNFLGGDPHDGPMPIDYFVWAIVGTTRTIMVDTGFDAAMARQRGRTITHCIEDGLSQ LGIDAGKIEDVIISHMHYDHAGNHGLFPNARFHLQDREMAFCTGRCMGHHGLSQAFDVEDVKAMVGRLFAGRLQFHHGDA EIAPGISVHRVGGHTDGLQIIRVHTARGWVVLASDATHFYANIQQRRPYPILYNVGDVLEGYNTLYRWADSFDHIIPGHD PMVLQRYPAGTPETAAWIAQVDVAPLTQWT >Mature_269_residues SASHENYRIFAIKYAHHHRLTRDNFLGGDPHDGPMPIDYFVWAIVGTTRTIMVDTGFDAAMARQRGRTITHCIEDGLSQL GIDAGKIEDVIISHMHYDHAGNHGLFPNARFHLQDREMAFCTGRCMGHHGLSQAFDVEDVKAMVGRLFAGRLQFHHGDAE IAPGISVHRVGGHTDGLQIIRVHTARGWVVLASDATHFYANIQQRRPYPILYNVGDVLEGYNTLYRWADSFDHIIPGHDP MVLQRYPAGTPETAAWIAQVDVAPLTQWT
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30298; Mature: 30166
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASHENYRIFAIKYAHHHRLTRDNFLGGDPHDGPMPIDYFVWAIVGTTRTIMVDTGFDA CCCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHH AMARQRGRTITHCIEDGLSQLGIDAGKIEDVIISHMHYDHAGNHGLFPNARFHLQDREMA HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEE FCTGRCMGHHGLSQAFDVEDVKAMVGRLFAGRLQFHHGDAEIAPGISVHRVGGHTDGLQI EEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEECCCCCCCEEE IRVHTARGWVVLASDATHFYANIQQRRPYPILYNVGDVLEGYNTLYRWADSFDHIIPGHD EEEEECCCEEEEECCCCEEEHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCC PMVLQRYPAGTPETAAWIAQVDVAPLTQWT CEEEEECCCCCCCHHEEEEEECCCCCCCCC >Mature Secondary Structure SASHENYRIFAIKYAHHHRLTRDNFLGGDPHDGPMPIDYFVWAIVGTTRTIMVDTGFDA CCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHH AMARQRGRTITHCIEDGLSQLGIDAGKIEDVIISHMHYDHAGNHGLFPNARFHLQDREMA HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEE FCTGRCMGHHGLSQAFDVEDVKAMVGRLFAGRLQFHHGDAEIAPGISVHRVGGHTDGLQI EEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEECCCCCCCEEE IRVHTARGWVVLASDATHFYANIQQRRPYPILYNVGDVLEGYNTLYRWADSFDHIIPGHD EEEEECCCEEEEECCCCEEEHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCC PMVLQRYPAGTPETAAWIAQVDVAPLTQWT CEEEEECCCCCCCHHEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA