| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is tauA [H]
Identifier: 153948232
GI number: 153948232
Start: 4415388
End: 4416431
Strand: Reverse
Name: tauA [H]
Synonym: YpsIP31758_3938
Alternate gene names: 153948232
Gene position: 4416431-4415388 (Counterclockwise)
Preceding gene: 153949657
Following gene: 153947789
Centisome position: 93.5
GC content: 52.11
Gene sequence:
>1044_bases ATGGCGATAACTTTTTCTTCGGCAACCCTTGCCGCTTCAAGACGCAGCTTTTTACAACTCCGCACGATTTTATTGGCCTC GTTACTGCCAGCTTCATTACTGCTCGCCACCAGCGCGCAGGCAGTCGATGTCATCGTGGCTTATCAAACCTCTGCTGAAC CGGCAAAGGTCGCGCAGGCAGATAACAGTTTTGCCAAACTCTCTGGTGCCAACGTGGATTGGCGCAAATTTGATAGCGGT TCCAGCGTTGTCAGGGCGCTAGCTTCTGGTGATGTGCAGATTGGTAATATTGGCTCCAGCCCACTCGCTGTCGCTGCCAG TCAAAATGTACCGATTGAAGTTTTCCTTCTGGCCTCACAACTGGGTAGCTCTGAAGCCTTGGTGGTGAAAAAAGAGATCA AAACGCCACAGGATTTGATTGGTAAACGTATTGCTGTGCCGTTTATTTCTACCGCCCATTACAGCTTGCTGGCGGCGTTG AAGCATTGGGGGATTAAACCGGGCCAAGTCACCATCCTCAACTTACAACCCCCGGCTATCGCCGCCGCCTGGCAGCGTGG TGATATTGACGGCGCTTATGTTTGGGCACCTGCCGTGAGTGAATTAGCCAAAACCGGTACGGTACTCACCGATTCAGCCC AAGTGGGCCAGTGGGGGGCACCAACATTGGATGTATGGGTAGTGCGCAAAGACTTTGCCAAAGCCCATCCTGAAGTTGTT ACCGCCTTTGCCCGCAGTGCATTGGCAGCACAAGCCGCTTATCTGAACAACCCTGAACAGTGGTTGCAAAATCAAGCGCA TTTAGCCCCACTCTCTCGCTTGAGTGGTGTGCCCACCGAGCAAGTTCCAGCGCTGGTAAAAGGCAATACTTACTTGCCAG TGGCTGAACAGATAACGCAATTAGGTCAGCCGGTGGATCAGGCTATCCGCGATACTGCAGAGTTCCTTAAGCAGCAAGGC AAGATCCCTCAAGTTGCCAGTGACTACCGTGATTTTGTCACTGACCGTTTTGTAAAAGAAATCCAGGCGACACCGCAATC CTAG
Upstream 100 bases:
>100_bases TATTCCTTTATGCTGCTCTCTCTCTCGGGTAACACTGTCATTTCAGGGCGCTTGCGCCCAGCCCTTAATGACGCAGTTAA CCAAGCGGAGTCAGTAAACC
Downstream 100 bases:
>100_bases GAGCCATCATGTTGAACGTGAGTGGCCTGTGGGCCGAATATCAAGGAAAACCGGCCTTACAGGATGTGTCATTGCAGATA GCATCCGGCCAGTTGGTTGT
Product: taurine transporter substrate binding subunit
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Sulfate starvation-induced protein 1; SSI1 [H]
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAITFSSATLAASRRSFLQLRTILLASLLPASLLLATSAQAVDVIVAYQTSAEPAKVAQADNSFAKLSGANVDWRKFDSG SSVVRALASGDVQIGNIGSSPLAVAASQNVPIEVFLLASQLGSSEALVVKKEIKTPQDLIGKRIAVPFISTAHYSLLAAL KHWGIKPGQVTILNLQPPAIAAAWQRGDIDGAYVWAPAVSELAKTGTVLTDSAQVGQWGAPTLDVWVVRKDFAKAHPEVV TAFARSALAAQAAYLNNPEQWLQNQAHLAPLSRLSGVPTEQVPALVKGNTYLPVAEQITQLGQPVDQAIRDTAEFLKQQG KIPQVASDYRDFVTDRFVKEIQATPQS
Sequences:
>Translated_347_residues MAITFSSATLAASRRSFLQLRTILLASLLPASLLLATSAQAVDVIVAYQTSAEPAKVAQADNSFAKLSGANVDWRKFDSG SSVVRALASGDVQIGNIGSSPLAVAASQNVPIEVFLLASQLGSSEALVVKKEIKTPQDLIGKRIAVPFISTAHYSLLAAL KHWGIKPGQVTILNLQPPAIAAAWQRGDIDGAYVWAPAVSELAKTGTVLTDSAQVGQWGAPTLDVWVVRKDFAKAHPEVV TAFARSALAAQAAYLNNPEQWLQNQAHLAPLSRLSGVPTEQVPALVKGNTYLPVAEQITQLGQPVDQAIRDTAEFLKQQG KIPQVASDYRDFVTDRFVKEIQATPQS >Mature_346_residues AITFSSATLAASRRSFLQLRTILLASLLPASLLLATSAQAVDVIVAYQTSAEPAKVAQADNSFAKLSGANVDWRKFDSGS SVVRALASGDVQIGNIGSSPLAVAASQNVPIEVFLLASQLGSSEALVVKKEIKTPQDLIGKRIAVPFISTAHYSLLAALK HWGIKPGQVTILNLQPPAIAAAWQRGDIDGAYVWAPAVSELAKTGTVLTDSAQVGQWGAPTLDVWVVRKDFAKAHPEVVT AFARSALAAQAAYLNNPEQWLQNQAHLAPLSRLSGVPTEQVPALVKGNTYLPVAEQITQLGQPVDQAIRDTAEFLKQQGK IPQVASDYRDFVTDRFVKEIQATPQS
Specific function: Part of a binding-protein-dependent transport system for taurine [H]
COG id: COG4521
COG function: function code P; ABC-type taurine transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=313, Percent_Identity=74.4408945686901, Blast_Score=471, Evalue=1e-134,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 - InterPro: IPR001638 - InterPro: IPR010068 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 36966; Mature: 36834
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITFSSATLAASRRSFLQLRTILLASLLPASLLLATSAQAVDVIVAYQTSAEPAKVAQA CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHC DNSFAKLSGANVDWRKFDSGSSVVRALASGDVQIGNIGSSPLAVAASQNVPIEVFLLASQ CCCHHHHCCCCCCHHCCCCHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCEEEEEEEHH LGSSEALVVKKEIKTPQDLIGKRIAVPFISTAHYSLLAALKHWGIKPGQVTILNLQPPAI CCCCCEEEEEHHCCCCHHHHCCEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH AAAWQRGDIDGAYVWAPAVSELAKTGTVLTDSAQVGQWGAPTLDVWVVRKDFAKAHPEVV HHHHHCCCCCCEEEEHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEHHHHHHCHHHH TAFARSALAAQAAYLNNPEQWLQNQAHLAPLSRLSGVPTEQVPALVKGNTYLPVAEQITQ HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCCHHHCCHHHCCCCCCCHHHHHHH LGQPVDQAIRDTAEFLKQQGKIPQVASDYRDFVTDRFVKEIQATPQS HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AITFSSATLAASRRSFLQLRTILLASLLPASLLLATSAQAVDVIVAYQTSAEPAKVAQA EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHC DNSFAKLSGANVDWRKFDSGSSVVRALASGDVQIGNIGSSPLAVAASQNVPIEVFLLASQ CCCHHHHCCCCCCHHCCCCHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCEEEEEEEHH LGSSEALVVKKEIKTPQDLIGKRIAVPFISTAHYSLLAALKHWGIKPGQVTILNLQPPAI CCCCCEEEEEHHCCCCHHHHCCEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH AAAWQRGDIDGAYVWAPAVSELAKTGTVLTDSAQVGQWGAPTLDVWVVRKDFAKAHPEVV HHHHHCCCCCCEEEEHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEHHHHHHCHHHH TAFARSALAAQAAYLNNPEQWLQNQAHLAPLSRLSGVPTEQVPALVKGNTYLPVAEQITQ HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCCHHHCCHHHCCCCCCCHHHHHHH LGQPVDQAIRDTAEFLKQQGKIPQVASDYRDFVTDRFVKEIQATPQS HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 8774726 [H]