| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is uxaB [H]
Identifier: 153948223
GI number: 153948223
Start: 567526
End: 568977
Strand: Direct
Name: uxaB [H]
Synonym: YpsIP31758_0492
Alternate gene names: 153948223
Gene position: 567526-568977 (Clockwise)
Preceding gene: 153949672
Following gene: 153948564
Centisome position: 12.02
GC content: 49.86
Gene sequence:
>1452_bases ATGCAAACGCTGAACCGTCGTGACTTTCCTGGCCGTAGCCACCCTGACAAAATCATTCAATTTGGTGAAGGTAACTTTCT GCGCGCCTTTGTGGACTGGCAAATTGATTTACTGAATGAACATACCGATCTGAACGCAGGGATCGTGGTGATCCGCCCAA TTGACACCGATTTTCCACCGTCGCTCAGTACGCAGGATGGTTTATATACTGCCGTGATCCGTGGTCTGAACGAGCAGGGG GAAGCAGTGCGTGAATCCCGCCTGATCCGCTCTGTAAACCGTGAAATCAATATTTATCGTCAGTTTGATGACTATCTGGC GCTGGCGCGTGATGCCAATATTCGCTTTATGTTCTCCAACACCACGGAAGCGGGTATTGCCTGGAATGAAGCTGATCAAT TCAGCGATGCGCCGCCAAGTTCTTTCCCTGCTAAATTGACTCGTTTATTATTTGAGCGTTTTGAGCATTTTGACGGTGCA GCAGATAAAGGCTGGGTGCTATTGCCTTGCGAATTGATTGACTATAACGGTGAAGCATTACGTGAACTGGTGCTGCGTTA TGCCAGTCATTGGCAGTTGCCAGCTGCCTTCACCCACTGGCTGACTGAAAATAATACCTTCTGCTCGACATTAGTTGATC GCATTGTGACTGGCTATCCACGCGATGAAGTGGCGGTGTTGCAAACAGAATTGGGGTATCAGGACAGCTTCTTGGATACC GCAGAATATTTCTATCTGTTTGTGATCCAAGGGCCACAAGGGTTGGCACAAGAACTGCGTTTAGATCAGTTAGATCTGAA TGTGCGCATTGTCGATGACATCAAACCTTATAAAGAACGCAAAGTGGCCATCTTGAATGGCGCACACACCGCGCTGGTCC CCGTGGCCTATTTGTCGGGTCTGGATACCGTTGGTCAGACGATGGATGATGCGCAGATCAGCCGCTTTGTGGAAAAAACC ATTACGGAAGAGATTGTTCCGGTATTGGATCTGCCCGAAGACGAGTTGTTGTCGTTTTCTCAAGCGGTACTGAGCCGTTT TCGTAACCCGTTTATTCAGCACCAATTGCTGTCGATTGCCTTGAATGGCATGACAAAATTCCGCACCCGTATCTTGCCGC AATTACTGACCTATCAGCAGCAAAAAGGCCAATTACCCCCACGTCTGACCTTTGCACTGGCAGCACTTATCGCCTTTTAC CGTGGTGAACGTGAGGGCCAAACCTACCCGTTGCAGGATGACGCCCACTGGCTGGAGCGTTATTCAACACTGTGGAATGG TGTCAAGCACGGTGATATCGCGTTGGCTGAATTGGTTGACCGCGTGCTTTCTGATGCTAACCATTGGGGGCAGGATTTGA CCGCGGTGCCTCAACTGGCTAATCAGGTGACAGAGCAACTGCAAACCATCCTTAGCCGTGGCATGAGAGCGGCGGTCGCG GCATATAGCTAA
Upstream 100 bases:
>100_bases ACTGCGGTAGATACCTTTCTGCAAAGAACGGACTGCTTGCAAAGCACGGACTGTCAGTGATGAACGGTCCAAAGCTGAAT GCGTTATAAGGTGAACCCTG
Downstream 100 bases:
>100_bases AGGCTTAACTATGCAAAATATTATAAAGATTCACCCGCTGGATAATGTGGCCGTTGCCCTGCAAGATCTGGCTGCAGATG AGCGGATCGAGAGCGGTGAG
Product: altronate oxidoreductase
Products: NA
Alternate protein names: Tagaturonate dehydrogenase; Tagaturonate reductase [H]
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MQTLNRRDFPGRSHPDKIIQFGEGNFLRAFVDWQIDLLNEHTDLNAGIVVIRPIDTDFPPSLSTQDGLYTAVIRGLNEQG EAVRESRLIRSVNREINIYRQFDDYLALARDANIRFMFSNTTEAGIAWNEADQFSDAPPSSFPAKLTRLLFERFEHFDGA ADKGWVLLPCELIDYNGEALRELVLRYASHWQLPAAFTHWLTENNTFCSTLVDRIVTGYPRDEVAVLQTELGYQDSFLDT AEYFYLFVIQGPQGLAQELRLDQLDLNVRIVDDIKPYKERKVAILNGAHTALVPVAYLSGLDTVGQTMDDAQISRFVEKT ITEEIVPVLDLPEDELLSFSQAVLSRFRNPFIQHQLLSIALNGMTKFRTRILPQLLTYQQQKGQLPPRLTFALAALIAFY RGEREGQTYPLQDDAHWLERYSTLWNGVKHGDIALAELVDRVLSDANHWGQDLTAVPQLANQVTEQLQTILSRGMRAAVA AYS
Sequences:
>Translated_483_residues MQTLNRRDFPGRSHPDKIIQFGEGNFLRAFVDWQIDLLNEHTDLNAGIVVIRPIDTDFPPSLSTQDGLYTAVIRGLNEQG EAVRESRLIRSVNREINIYRQFDDYLALARDANIRFMFSNTTEAGIAWNEADQFSDAPPSSFPAKLTRLLFERFEHFDGA ADKGWVLLPCELIDYNGEALRELVLRYASHWQLPAAFTHWLTENNTFCSTLVDRIVTGYPRDEVAVLQTELGYQDSFLDT AEYFYLFVIQGPQGLAQELRLDQLDLNVRIVDDIKPYKERKVAILNGAHTALVPVAYLSGLDTVGQTMDDAQISRFVEKT ITEEIVPVLDLPEDELLSFSQAVLSRFRNPFIQHQLLSIALNGMTKFRTRILPQLLTYQQQKGQLPPRLTFALAALIAFY RGEREGQTYPLQDDAHWLERYSTLWNGVKHGDIALAELVDRVLSDANHWGQDLTAVPQLANQVTEQLQTILSRGMRAAVA AYS >Mature_483_residues MQTLNRRDFPGRSHPDKIIQFGEGNFLRAFVDWQIDLLNEHTDLNAGIVVIRPIDTDFPPSLSTQDGLYTAVIRGLNEQG EAVRESRLIRSVNREINIYRQFDDYLALARDANIRFMFSNTTEAGIAWNEADQFSDAPPSSFPAKLTRLLFERFEHFDGA ADKGWVLLPCELIDYNGEALRELVLRYASHWQLPAAFTHWLTENNTFCSTLVDRIVTGYPRDEVAVLQTELGYQDSFLDT AEYFYLFVIQGPQGLAQELRLDQLDLNVRIVDDIKPYKERKVAILNGAHTALVPVAYLSGLDTVGQTMDDAQISRFVEKT ITEEIVPVLDLPEDELLSFSQAVLSRFRNPFIQHQLLSIALNGMTKFRTRILPQLLTYQQQKGQLPPRLTFALAALIAFY RGEREGQTYPLQDDAHWLERYSTLWNGVKHGDIALAELVDRVLSDANHWGQDLTAVPQLANQVTEQLQTILSRGMRAAVA AYS
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxaB subfamily [H]
Homologues:
Organism=Escherichia coli, GI48994885, Length=479, Percent_Identity=72.4425887265136, Blast_Score=733, Evalue=0.0, Organism=Escherichia coli, GI1787823, Length=478, Percent_Identity=23.4309623430962, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1790779, Length=492, Percent_Identity=25, Blast_Score=102, Evalue=7e-23, Organism=Escherichia coli, GI1788497, Length=383, Percent_Identity=24.2819843342037, Blast_Score=99, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6324401, Length=498, Percent_Identity=21.0843373493976, Blast_Score=94, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6320765, Length=498, Percent_Identity=21.0843373493976, Blast_Score=94, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR013118 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.58 [H]
Molecular weight: Translated: 54937; Mature: 54937
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLNRRDFPGRSHPDKIIQFGEGNFLRAFVDWQIDLLNEHTDLNAGIVVIRPIDTDFPP CCCCCCCCCCCCCCCHHHHEECCCCEEEEEECHHHHHHCCCCCCCCCEEEEEECCCCCCC SLSTQDGLYTAVIRGLNEQGEAVRESRLIRSVNREINIYRQFDDYLALARDANIRFMFSN CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC TTEAGIAWNEADQFSDAPPSSFPAKLTRLLFERFEHFDGAADKGWVLLPCELIDYNGEAL CCCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHEECCCHHHH RELVLRYASHWQLPAAFTHWLTENNTFCSTLVDRIVTGYPRDEVAVLQTELGYQDSFLDT HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHH AEYFYLFVIQGPQGLAQELRLDQLDLNVRIVDDIKPYKERKVAILNGAHTALVPVAYLSG CCEEEEEEEECCHHHHHHHCHHHHCCCEEEECCCCCHHHCEEEEECCCHHHHHHHHHHHC LDTVGQTMDDAQISRFVEKTITEEIVPVLDLPEDELLSFSQAVLSRFRNPFIQHQLLSIA HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH LNGMTKFRTRILPQLLTYQQQKGQLPPRLTFALAALIAFYRGEREGQTYPLQDDAHWLER HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH YSTLWNGVKHGDIALAELVDRVLSDANHWGQDLTAVPQLANQVTEQLQTILSRGMRAAVA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHH AYS CCC >Mature Secondary Structure MQTLNRRDFPGRSHPDKIIQFGEGNFLRAFVDWQIDLLNEHTDLNAGIVVIRPIDTDFPP CCCCCCCCCCCCCCCHHHHEECCCCEEEEEECHHHHHHCCCCCCCCCEEEEEECCCCCCC SLSTQDGLYTAVIRGLNEQGEAVRESRLIRSVNREINIYRQFDDYLALARDANIRFMFSN CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC TTEAGIAWNEADQFSDAPPSSFPAKLTRLLFERFEHFDGAADKGWVLLPCELIDYNGEAL CCCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHEECCCHHHH RELVLRYASHWQLPAAFTHWLTENNTFCSTLVDRIVTGYPRDEVAVLQTELGYQDSFLDT HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHH AEYFYLFVIQGPQGLAQELRLDQLDLNVRIVDDIKPYKERKVAILNGAHTALVPVAYLSG CCEEEEEEEECCHHHHHHHCHHHHCCCEEEECCCCCHHHCEEEEECCCHHHHHHHHHHHC LDTVGQTMDDAQISRFVEKTITEEIVPVLDLPEDELLSFSQAVLSRFRNPFIQHQLLSIA HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH LNGMTKFRTRILPQLLTYQQQKGQLPPRLTFALAALIAFYRGEREGQTYPLQDDAHWLER HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH YSTLWNGVKHGDIALAELVDRVLSDANHWGQDLTAVPQLANQVTEQLQTILSRGMRAAVA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHH AYS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA