| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948221
Identifier: 153948221
GI number: 153948221
Start: 1151851
End: 1152216
Strand: Reverse
Name: 153948221
Synonym: YpsIP31758_0962
Alternate gene names: NA
Gene position: 1152216-1151851 (Counterclockwise)
Preceding gene: 153949409
Following gene: 153948319
Centisome position: 24.39
GC content: 31.15
Gene sequence:
>366_bases ATGCCAAATTCAAATATAAAATTAATGGTATTTTTTGCACCTATATTATTTGGCTGCCAAATAAATAGTGAAGAAAACAA ACCTAACGAGGAGATAATCAATCAACTCACCGCTCTGACGGCTGGATTACGTTTTTTAAAAGAAGACTGCAACCTCAAAA AAATTCCAAATGAACAAGAGATCATTAACTCTGCAATTAAAATAGCCAATCTGAAGGGTGAAATTATGACATCTAAACAT AACAATAAGATCATAAAGAAAAGTGAATCTCTATATCAAGATATCAAATCAGATTTGGCTGCTAAAAACACTAAGTGTCT GGAGTTAGAGGAGCTATTAACCCCATTTATTAAGAAAATAAATTAG
Upstream 100 bases:
>100_bases AAAAACACAAAAAACAATCTCATCCATTATAATTTGTTATTGTCACCATCCTTATTCTATGCTTTTATTATAAAACAATT CATTTACGCTAGAGATAATC
Downstream 100 bases:
>100_bases TCACATGACTCCCAAGAAACAGGTATAGAACACCCGCCAATGAAATATAAGGGCCAAATGCGATGTAATTAATCTCTTTT CCATTATCTTTTTTATCAAA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MPNSNIKLMVFFAPILFGCQINSEENKPNEEIINQLTALTAGLRFLKEDCNLKKIPNEQEIINSAIKIANLKGEIMTSKH NNKIIKKSESLYQDIKSDLAAKNTKCLELEELLTPFIKKIN
Sequences:
>Translated_121_residues MPNSNIKLMVFFAPILFGCQINSEENKPNEEIINQLTALTAGLRFLKEDCNLKKIPNEQEIINSAIKIANLKGEIMTSKH NNKIIKKSESLYQDIKSDLAAKNTKCLELEELLTPFIKKIN >Mature_120_residues PNSNIKLMVFFAPILFGCQINSEENKPNEEIINQLTALTAGLRFLKEDCNLKKIPNEQEIINSAIKIANLKGEIMTSKHN NKIIKKSESLYQDIKSDLAAKNTKCLELEELLTPFIKKIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13732; Mature: 13601
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSNIKLMVFFAPILFGCQINSEENKPNEEIINQLTALTAGLRFLKEDCNLKKIPNEQE CCCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH IINSAIKIANLKGEIMTSKHNNKIIKKSESLYQDIKSDLAAKNTKCLELEELLTPFIKKI HHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC N C >Mature Secondary Structure PNSNIKLMVFFAPILFGCQINSEENKPNEEIINQLTALTAGLRFLKEDCNLKKIPNEQE CCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH IINSAIKIANLKGEIMTSKHNNKIIKKSESLYQDIKSDLAAKNTKCLELEELLTPFIKKI HHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA