| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948162
Identifier: 153948162
GI number: 153948162
Start: 2542522
End: 2543136
Strand: Reverse
Name: 153948162
Synonym: YpsIP31758_2230
Alternate gene names: NA
Gene position: 2543136-2542522 (Counterclockwise)
Preceding gene: 153950453
Following gene: 153947596
Centisome position: 53.84
GC content: 45.69
Gene sequence:
>615_bases ATGACAACACTCACGGTGGATTGGGCGACTCATCAGGCTGCCAGCTTTGCCTGCCTTAACTGGCATTATGCCAAAGCGGT ACCAGTGGGAAAATTGGTAAAAGTGGGTGCGTGGGAAGATGGGAAATTTATTGGTGTCGTTATTTTTAGCCGCGGTGCCA ATAACCATATTGGGCAGCCTTACAGTTTGCAGCAGGATCAAGTGTGCGAACTTACCCGTGTGGCATTACGTCAGCACATA TCGCCAGTTAGTCAGATATTGGCAAAAGCGATTAAATTTCTTGCTGATGTTTGCCCCGGTCTGCGACTAATCGTCTCCTA TGCAGATAAAGATCAAAATCATCATGGCGGAATTTATCAGGCCACCAATTGGATATATGAGGGGCTATTTGGTGCCGGAA CAGTGGGGGCGTTCATTATCAAAGGTAAGAAAACTCACCCGCGCAGCATTTTTGCCAAAGGGGTAAAGCAAAGTCTTGAA TCAATCCGACAGTATTTAGACCCCAACGCCCAAGAGTTCAAGACAGCAGGAAAGCATAAATACCTGATGCCCCTTGACAA GAAAATGAAAAAAATTCTGCTATCACGTCATAAACCCTATCCAAAGAGGGTATGA
Upstream 100 bases:
>100_bases ATCAAATGTTGAATCTCGATTTTCTGCCTGGTAACGAAGATGATCAGGGAAAGCTCGATCATCTGGATGCCAAGCTCTGC CCACACTGTGGGGGTGTTCT
Downstream 100 bases:
>100_bases CGATGGATAAGCCGATACTTGATAAGGTCGAGGCATTGGCTGGGCGTGGATTAACGGAACAACAGATAGCTGACACACTG GATATAGATATTGATAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTTLTVDWATHQAASFACLNWHYAKAVPVGKLVKVGAWEDGKFIGVVIFSRGANNHIGQPYSLQQDQVCELTRVALRQHI SPVSQILAKAIKFLADVCPGLRLIVSYADKDQNHHGGIYQATNWIYEGLFGAGTVGAFIIKGKKTHPRSIFAKGVKQSLE SIRQYLDPNAQEFKTAGKHKYLMPLDKKMKKILLSRHKPYPKRV
Sequences:
>Translated_204_residues MTTLTVDWATHQAASFACLNWHYAKAVPVGKLVKVGAWEDGKFIGVVIFSRGANNHIGQPYSLQQDQVCELTRVALRQHI SPVSQILAKAIKFLADVCPGLRLIVSYADKDQNHHGGIYQATNWIYEGLFGAGTVGAFIIKGKKTHPRSIFAKGVKQSLE SIRQYLDPNAQEFKTAGKHKYLMPLDKKMKKILLSRHKPYPKRV >Mature_203_residues TTLTVDWATHQAASFACLNWHYAKAVPVGKLVKVGAWEDGKFIGVVIFSRGANNHIGQPYSLQQDQVCELTRVALRQHIS PVSQILAKAIKFLADVCPGLRLIVSYADKDQNHHGGIYQATNWIYEGLFGAGTVGAFIIKGKKTHPRSIFAKGVKQSLES IRQYLDPNAQEFKTAGKHKYLMPLDKKMKKILLSRHKPYPKRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22826; Mature: 22695
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLTVDWATHQAASFACLNWHYAKAVPVGKLVKVGAWEDGKFIGVVIFSRGANNHIGQP CCEEEEECCHHHHHHHHHCCCHHHHHCCCCHHEEECCCCCCCEEEEEEEECCCCCCCCCC YSLQQDQVCELTRVALRQHISPVSQILAKAIKFLADVCPGLRLIVSYADKDQNHHGGIYQ CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH ATNWIYEGLFGAGTVGAFIIKGKKTHPRSIFAKGVKQSLESIRQYLDPNAQEFKTAGKHK HHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC YLMPLDKKMKKILLSRHKPYPKRV EECCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTLTVDWATHQAASFACLNWHYAKAVPVGKLVKVGAWEDGKFIGVVIFSRGANNHIGQP CEEEEECCHHHHHHHHHCCCHHHHHCCCCHHEEECCCCCCCEEEEEEEECCCCCCCCCC YSLQQDQVCELTRVALRQHISPVSQILAKAIKFLADVCPGLRLIVSYADKDQNHHGGIYQ CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH ATNWIYEGLFGAGTVGAFIIKGKKTHPRSIFAKGVKQSLESIRQYLDPNAQEFKTAGKHK HHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC YLMPLDKKMKKILLSRHKPYPKRV EECCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA