| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yceK [H]
Identifier: 153948052
GI number: 153948052
Start: 1812558
End: 1812890
Strand: Direct
Name: yceK [H]
Synonym: YpsIP31758_1554
Alternate gene names: 153948052
Gene position: 1812558-1812890 (Clockwise)
Preceding gene: 153949948
Following gene: 153948124
Centisome position: 38.37
GC content: 50.45
Gene sequence:
>333_bases GTGAGCGCGTGGCGTATTGCCCGTTTTATCATTAAATCGTCCGAATTTGAAAGGGTTAATGCTGTGAATCTCATCCTGAG TTTGGTAAGCCGCCTGCGGATGATCGCCCGGCTCATCTTAGTGGGGAGTGCTCTCATACTGTTATCAGGTTGCGGCAGCA TTATTAGCCGCACGGTGCCCGGTCAGGGGCTGGGCCACCAATATTATCCCGGTGTACAGTGGGATATGCGTGAAGGGCCA TGGAAATACATCACTGTGATTGACGTTCCCCTATCGATGATTGTTGATACATTTATGCTGCCAATCGATGCCCAGCATGG GCCTTATGAATAG
Upstream 100 bases:
>100_bases ATGGCTATTACCGTCAGCGAGCACATAACGTAGGGGTATTTCCCGCAATTGAGTATCAAAATCAGTAGCGGCAGACCATA AGAGCAGGTTATAAAAACGG
Downstream 100 bases:
>100_bases TCTCAGCCTTTGCCGTTATTGAGTCATCGGGTTTTGTCAGTAATCTGAACCAGCCACAAGGGCTGGTTTTTTACAGATAA CGCGGGTATTTGTGCTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSAWRIARFIIKSSEFERVNAVNLILSLVSRLRMIARLILVGSALILLSGCGSIISRTVPGQGLGHQYYPGVQWDMREGP WKYITVIDVPLSMIVDTFMLPIDAQHGPYE
Sequences:
>Translated_110_residues MSAWRIARFIIKSSEFERVNAVNLILSLVSRLRMIARLILVGSALILLSGCGSIISRTVPGQGLGHQYYPGVQWDMREGP WKYITVIDVPLSMIVDTFMLPIDAQHGPYE >Mature_109_residues SAWRIARFIIKSSEFERVNAVNLILSLVSRLRMIARLILVGSALILLSGCGSIISRTVPGQGLGHQYYPGVQWDMREGPW KYITVIDVPLSMIVDTFMLPIDAQHGPYE
Specific function: Unknown
COG id: COG5645
COG function: function code R; Predicted periplasmic lipoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yidQ [H]
Homologues:
Organism=Escherichia coli, GI1787288, Length=74, Percent_Identity=64.8648648648649, Blast_Score=114, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010780 [H]
Pfam domain/function: PF07119 DUF1375 [H]
EC number: NA
Molecular weight: Translated: 12346; Mature: 12215
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAWRIARFIIKSSEFERVNAVNLILSLVSRLRMIARLILVGSALILLSGCGSIISRTVP CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GQGLGHQYYPGVQWDMREGPWKYITVIDVPLSMIVDTFMLPIDAQHGPYE CCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SAWRIARFIIKSSEFERVNAVNLILSLVSRLRMIARLILVGSALILLSGCGSIISRTVP CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GQGLGHQYYPGVQWDMREGPWKYITVIDVPLSMIVDTFMLPIDAQHGPYE CCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]