Click here to switch to the map view.

The map label for this gene is prtC [H]

Identifier: 153948040

GI number: 153948040

Start: 4547415

End: 4548743

Strand: Direct

Name: prtC [H]

Synonym: YpsIP31758_4037

Alternate gene names: 153948040

Gene position: 4547415-4548743 (Clockwise)

Preceding gene: 153948183

Following gene: 153950916

Centisome position: 96.28

GC content: 42.51

Gene sequence:

>1329_bases
ATGAGTTACTCCAGGGAACACCGCAACACTATAATTAAAAATGAACATGTCATGCGCAGAGGCATTCATTATAAGAATGA
AATTAAAGGTGTTATAGCACCACAAATATCTAGCCATCAGTCATGGAAAGAAAACACTATTCATAATAAAAATACAAACC
TGACATATTCATTTAGTCGAGCATATACATTATGGGATTATGATCGAACGTTCCAACAAAACGCTTATGTCTCATTATTT
AATCCAGCCCAAATCCATCAGGCAAAAATCGCGATGCAATCTTGGGCTGATGTAGCCAACATCTCCTTCACCGAAGCATC
AGCAGACTCTTCCGCCAATATTCTATTTTTAAATTTTCAGCGCCCAGGCAATGTGGCAGGTTATGCCTATCATCCTAATC
TAGGGAGTTTCAGCCCAATATGGATTAATTACAGCTTCAGCGATAACCAACATCCCAGCAGATTAAATTATGGTGGCGGG
GTATTAACACATGAGATTGGCCATGCTCTGGGGTTGGGTCATTCTCATGCCCCCCATGGCTACACGCAACAAATGAGTGT
GATGAGCTATTTATCCGAACAGGATTCAGGCGCGAACTATGGCCAACATTACTTATCCACGCCACAAATGTACGATATCG
CCGCAATCCAGTATCTGTATGGGGCTAATCTACACACCCGCACCGGTGATACCGTTTATGGCTTCAACTCGACGAGTTAT
AGAGATCATTTCACCGCCACCCACGCCAGTGATGCGTTGATTTTCTGTGTCTGGGATGCTGGCGGCAATGATACTTTTGA
CTTCTCTGGCTATAAGCAAAATCAAATGATTAATCTTAACGAACTCTGTTTTTCTGATGTTGGTGGACTAAAAGGAAATG
TGTCTATTGCAGCGGATGTTACGATTGAAAATGCCATCGGCGGCAGTGGCCATGATGATATTATCGGCAATCACACCAAT
AATATTTTGACCGGTAACGGCGGATCTGATCAACTTTGGGGTAACGGGGGCAATAATACTTTCCGCTATGCCAGTGCCAG
AGATTCAATGACCACCTCGCCCGATACTATTCATGATTTTAAATCAGGCCGTGACAAGATAGATTTGTCGCAATTAATGC
CCTCAACCGACCGTGTTATTTTTGTCGATAGATTAAGTTTTAACGGTCAAACAGAGATGGGGCAGCAATATAATGAAGTG
GCGGACATAACTTATCTTATGATCGATTTTGACGCTCAAGTCAGCGAGTGCGATATGATGATTAAATTTACCGGCAGGCA
CCATTTCACCGCCAATGACTTTATTTTAAGTACGTCACTGACGGCATAA

Upstream 100 bases:

>100_bases
TACGCTTATTTAAAACACCTCTGTCATCATTAATATCCCCCTCGCACATTAATAGAGTTCAAAATATTTTATTAACACTC
AAAAAGAGACGATGATGTTT

Downstream 100 bases:

>100_bases
ATATTTATATCTACTTACCCGAATCACTCATTAAAATTTCAGCGATTCGGGTGAGAAAATGCCGCTAACGCGGCGGCGTC
ACCGATGAAGGGTATATGTC

Product: metalloprotease

Products: NA

Alternate protein names: ProC [H]

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSYSREHRNTIIKNEHVMRRGIHYKNEIKGVIAPQISSHQSWKENTIHNKNTNLTYSFSRAYTLWDYDRTFQQNAYVSLF
NPAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQRPGNVAGYAYHPNLGSFSPIWINYSFSDNQHPSRLNYGGG
VLTHEIGHALGLGHSHAPHGYTQQMSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSY
RDHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQMINLNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDIIGNHTN
NILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYNEV
ADITYLMIDFDAQVSECDMMIKFTGRHHFTANDFILSTSLTA

Sequences:

>Translated_442_residues
MSYSREHRNTIIKNEHVMRRGIHYKNEIKGVIAPQISSHQSWKENTIHNKNTNLTYSFSRAYTLWDYDRTFQQNAYVSLF
NPAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQRPGNVAGYAYHPNLGSFSPIWINYSFSDNQHPSRLNYGGG
VLTHEIGHALGLGHSHAPHGYTQQMSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSY
RDHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQMINLNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDIIGNHTN
NILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYNEV
ADITYLMIDFDAQVSECDMMIKFTGRHHFTANDFILSTSLTA
>Mature_441_residues
SYSREHRNTIIKNEHVMRRGIHYKNEIKGVIAPQISSHQSWKENTIHNKNTNLTYSFSRAYTLWDYDRTFQQNAYVSLFN
PAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQRPGNVAGYAYHPNLGSFSPIWINYSFSDNQHPSRLNYGGGV
LTHEIGHALGLGHSHAPHGYTQQMSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSYR
DHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQMINLNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDIIGNHTNN
ILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYNEVA
DITYLMIDFDAQVSECDMMIKFTGRHHFTANDFILSTSLTA

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018511
- InterPro:   IPR001343
- InterPro:   IPR001818
- InterPro:   IPR016294
- InterPro:   IPR013858
- InterPro:   IPR006026
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00353 HemolysinCabind; PF00413 Peptidase_M10; PF08548 Peptidase_M10_C [H]

EC number: NA

Molecular weight: Translated: 49309; Mature: 49178

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSREHRNTIIKNEHVMRRGIHYKNEIKGVIAPQISSHQSWKENTIHNKNTNLTYSFSR
CCCCHHHHHHHHCCHHHHHHCCCCHHHCCEEECCCCCCCCCHHHCCCCCCCCCEEEEECC
AYTLWDYDRTFQQNAYVSLFNPAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQ
EEEEECCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEC
RPGNVAGYAYHPNLGSFSPIWINYSFSDNQHPSRLNYGGGVLTHEIGHALGLGHSHAPHG
CCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCC
YTQQMSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSY
HHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCEECCCCCEEEECCCCCC
RDHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQMINLNELCFSDVGGLKGNVSIAADV
CCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCEEEHHHHHHHHCCCCCCCEEEEEEE
TIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDF
EEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHH
KSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYNEVADITYLMIDFDAQVSECDMM
HCCCCCEEHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCEEEEEEEECCCCCCCCEEE
IKFTGRHHFTANDFILSTSLTA
EEECCCEEEECCCEEEEEECCC
>Mature Secondary Structure 
SYSREHRNTIIKNEHVMRRGIHYKNEIKGVIAPQISSHQSWKENTIHNKNTNLTYSFSR
CCCHHHHHHHHCCHHHHHHCCCCHHHCCEEECCCCCCCCCHHHCCCCCCCCCEEEEECC
AYTLWDYDRTFQQNAYVSLFNPAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQ
EEEEECCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEC
RPGNVAGYAYHPNLGSFSPIWINYSFSDNQHPSRLNYGGGVLTHEIGHALGLGHSHAPHG
CCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCC
YTQQMSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSY
HHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCEECCCCCEEEECCCCCC
RDHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQMINLNELCFSDVGGLKGNVSIAADV
CCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCEEEHHHHHHHHCCCCCCCEEEEEEE
TIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDF
EEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHH
KSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYNEVADITYLMIDFDAQVSECDMM
HCCCCCEEHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCEEEEEEEECCCCCCCCEEE
IKFTGRHHFTANDFILSTSLTA
EEECCCEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2211513 [H]