| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is iucA [H]
Identifier: 153948002
GI number: 153948002
Start: 874770
End: 876542
Strand: Reverse
Name: iucA [H]
Synonym: YpsIP31758_0714
Alternate gene names: 153948002
Gene position: 876542-874770 (Counterclockwise)
Preceding gene: 153947998
Following gene: 153949111
Centisome position: 18.56
GC content: 53.19
Gene sequence:
>1773_bases ATGACTATCCCAGTAGAAACCTTAGCAACCGATGTGGCTGCTCAATGTTTCCTCAACGCGCTGATTCGTGAAACCCAGGA CTGGCAGATCGTTCCGGCAGCGGGCCACCAACCGTACCCACAACTCCACATTCCTCTTTCTTCTTCACACGCTATCCACA TTGCCTTATGCCATATCTCCCCAACACAGCATCATCACTATCTGTTCCCTGCCTACCTGCATCAGCAGGGTAATGATAGG CAGGATGATGACACCCCGGTAAAACTCGGGATCGAACAGTTGGTGACGCTTCTGTTGGAGAAGCCAACGGTAAAAGGTGA GCTGTCTGATGATGTGGTTGCTCGTTTCCGTCAACGGGTGCTAGAAAGTCATGATAATACTCAGCAAGCGATTAATATTC GTCTGGATTGGCCGTCATTACGCGATAAACCACTTAATTTTGCCCAGGCAGAACAAGGATTACTGGCCGGCCATGCCTTT CACCCGGCACCGAAATCCCATCAACCTTTTAATGAAAAACAGGCCCAGCGTTATCTGCCCGATTTTGCCTCCCGCTTCCC ACTACGCTGGTTTGCAGTCGATAAACGCTACCTGTGCGGCGATAGCCTAAAGCTAACGCTACAACACCGGCTGCAACGCT TTGCCAGCGAAAGCGCCCCACAATTACTCGCGTATTTTACCGATGACGTTTGGCTGCTCCCCATGCACCCCTGGCAAGCC GATCACCTATTGAAACAAGACTGGTGCCAGCAATTAGTACAACAAAACGCGTTGCATGATCTGGGCGAAGCGGGTGAACG CTGGCTACCCACCAGCTCTTCACGTTCACTGTACAGCCCGTCAAACCGCGACATGGTCAAGTTCTCACTCAGTGTGCGCC TGACCAACTCAGTACGAACCCTGTCGGTAAAAGAGGCCAAACGCGGTATGCGCTTGGCACGTTTGGCTCAAACACCCCGC TGGCAAGAGCTGCAAGCGCGCTACCCGACTTTCCGTGTGATGCAGGAAGATGGTTGGGCCGGTTTGCGTTCAGCCGATTT CACTCTTCAAGAAGAGAGTCTGTTGGTGCTACGTGACAACCTGCTATTCAGCCAACCCGATAGCCAGACCAATGTGTTGG TCACCTTGACACAAGCCGCGCCCGATGGGGGGGACAGCCTGCTGGCCAGTGCTGTGCGTCGTTTGGCTGCCCGTCTGAAT CTGCCATTGCAACAGGCCGCTTTCTGCTGGCTGGATGCTTACTGCCAGCACGTCTTATTGCCACTGTTCAGCACCGAGGC TGACTACGGGCTGGTGTTGTTAGCGCATCAGCAAAATATTCTGGTGGAGATGCAGCAAGATCTGCCTGTCGGTATGTTGT ACCGCGACTGCCAAGGGAGCGGCTTTACCCAGAGCGCGCTGCCGTGGTTGGCGGAAATTGGCGAAGCCGAAGCGGAAAAT AGCTTTAGCGAACAGCAATTATTACGTTACTTCCCGTATTACCTGCTGGTGAACTCCAGCCTCGCGGTAACGGCTGCCTT GGCTGCCGCAGGTTTCGACAGCGAGGAAAATTTGATGGTTCGTGTGCGTGACGCACTCAGCGCCCTGCGTACTTGCGCCA AAAACACCTTATGTCTGGATTACGTACTTGATAGCCCACATTGGCACTGCAAAGGTAATTTCTTCTGCTATCTACACGAT CACAACGAAAACACCATCGTTGATCCGGCAGTGATCTACTTCGATTTCGTTAACCCTCTGCACCAGGGGGTGATCCATGG GGCCACACGCTAA
Upstream 100 bases:
>100_bases AAGGAGATTTATTGAAAAATCGTATCATATTCCAATTGATAATGATAACCACTATTGATATAAGAATCGTTCTCAATGGA TTAATAAGCGACATGACATC
Downstream 100 bases:
>100_bases GTTAATACACTCCGGTGGCAGTTTTTACTGTGAACATCTGGGAAAGGCGCTGACTCTCGGTCTGGGACTTGATGGCAGTG CCGTACTGCACTTGCCTGGG
Product: aerobactin siderophore biosynthesis protein IucA
Products: ADP; phosphate; aerobactin
Alternate protein names: NA
Number of amino acids: Translated: 590; Mature: 589
Protein sequence:
>590_residues MTIPVETLATDVAAQCFLNALIRETQDWQIVPAAGHQPYPQLHIPLSSSHAIHIALCHISPTQHHHYLFPAYLHQQGNDR QDDDTPVKLGIEQLVTLLLEKPTVKGELSDDVVARFRQRVLESHDNTQQAINIRLDWPSLRDKPLNFAQAEQGLLAGHAF HPAPKSHQPFNEKQAQRYLPDFASRFPLRWFAVDKRYLCGDSLKLTLQHRLQRFASESAPQLLAYFTDDVWLLPMHPWQA DHLLKQDWCQQLVQQNALHDLGEAGERWLPTSSSRSLYSPSNRDMVKFSLSVRLTNSVRTLSVKEAKRGMRLARLAQTPR WQELQARYPTFRVMQEDGWAGLRSADFTLQEESLLVLRDNLLFSQPDSQTNVLVTLTQAAPDGGDSLLASAVRRLAARLN LPLQQAAFCWLDAYCQHVLLPLFSTEADYGLVLLAHQQNILVEMQQDLPVGMLYRDCQGSGFTQSALPWLAEIGEAEAEN SFSEQQLLRYFPYYLLVNSSLAVTAALAAAGFDSEENLMVRVRDALSALRTCAKNTLCLDYVLDSPHWHCKGNFFCYLHD HNENTIVDPAVIYFDFVNPLHQGVIHGATR
Sequences:
>Translated_590_residues MTIPVETLATDVAAQCFLNALIRETQDWQIVPAAGHQPYPQLHIPLSSSHAIHIALCHISPTQHHHYLFPAYLHQQGNDR QDDDTPVKLGIEQLVTLLLEKPTVKGELSDDVVARFRQRVLESHDNTQQAINIRLDWPSLRDKPLNFAQAEQGLLAGHAF HPAPKSHQPFNEKQAQRYLPDFASRFPLRWFAVDKRYLCGDSLKLTLQHRLQRFASESAPQLLAYFTDDVWLLPMHPWQA DHLLKQDWCQQLVQQNALHDLGEAGERWLPTSSSRSLYSPSNRDMVKFSLSVRLTNSVRTLSVKEAKRGMRLARLAQTPR WQELQARYPTFRVMQEDGWAGLRSADFTLQEESLLVLRDNLLFSQPDSQTNVLVTLTQAAPDGGDSLLASAVRRLAARLN LPLQQAAFCWLDAYCQHVLLPLFSTEADYGLVLLAHQQNILVEMQQDLPVGMLYRDCQGSGFTQSALPWLAEIGEAEAEN SFSEQQLLRYFPYYLLVNSSLAVTAALAAAGFDSEENLMVRVRDALSALRTCAKNTLCLDYVLDSPHWHCKGNFFCYLHD HNENTIVDPAVIYFDFVNPLHQGVIHGATR >Mature_589_residues TIPVETLATDVAAQCFLNALIRETQDWQIVPAAGHQPYPQLHIPLSSSHAIHIALCHISPTQHHHYLFPAYLHQQGNDRQ DDDTPVKLGIEQLVTLLLEKPTVKGELSDDVVARFRQRVLESHDNTQQAINIRLDWPSLRDKPLNFAQAEQGLLAGHAFH PAPKSHQPFNEKQAQRYLPDFASRFPLRWFAVDKRYLCGDSLKLTLQHRLQRFASESAPQLLAYFTDDVWLLPMHPWQAD HLLKQDWCQQLVQQNALHDLGEAGERWLPTSSSRSLYSPSNRDMVKFSLSVRLTNSVRTLSVKEAKRGMRLARLAQTPRW QELQARYPTFRVMQEDGWAGLRSADFTLQEESLLVLRDNLLFSQPDSQTNVLVTLTQAAPDGGDSLLASAVRRLAARLNL PLQQAAFCWLDAYCQHVLLPLFSTEADYGLVLLAHQQNILVEMQQDLPVGMLYRDCQGSGFTQSALPWLAEIGEAEAENS FSEQQLLRYFPYYLLVNSSLAVTAALAAAGFDSEENLMVRVRDALSALRTCAKNTLCLDYVLDSPHWHCKGNFFCYLHDH NENTIVDPAVIYFDFVNPLHQGVIHGATR
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007310 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]
EC number: 6.3.2.27
Molecular weight: Translated: 66908; Mature: 66776
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPVETLATDVAAQCFLNALIRETQDWQIVPAAGHQPYPQLHIPLSSSHAIHIALCHIS CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEC PTQHHHYLFPAYLHQQGNDRQDDDTPVKLGIEQLVTLLLEKPTVKGELSDDVVARFRQRV CCCCCCEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LESHDNTQQAINIRLDWPSLRDKPLNFAQAEQGLLAGHAFHPAPKSHQPFNEKQAQRYLP HHCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHHHH DFASRFPLRWFAVDKRYLCGDSLKLTLQHRLQRFASESAPQLLAYFTDDVWLLPMHPWQA HHHHHCCEEEEEECCCEECCCCHHHHHHHHHHHHHCCCCCHHHHEECCCEEEEECCCCCH DHLLKQDWCQQLVQQNALHDLGEAGERWLPTSSSRSLYSPSNRDMVKFSLSVRLTNSVRT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEE LSVKEAKRGMRLARLAQTPRWQELQARYPTFRVMQEDGWAGLRSADFTLQEESLLVLRDN EEHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCEECCCCEEEEECC LLFSQPDSQTNVLVTLTQAAPDGGDSLLASAVRRLAARLNLPLQQAAFCWLDAYCQHVLL EEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH PLFSTEADYGLVLLAHQQNILVEMQQDLPVGMLYRDCQGSGFTQSALPWLAEIGEAEAEN HHHCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCHHHCC SFSEQQLLRYFPYYLLVNSSLAVTAALAAAGFDSEENLMVRVRDALSALRTCAKNTLCLD CCCHHHHHHHCCHHEEECCCHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHCCCEEEE YVLDSPHWHCKGNFFCYLHDHNENTIVDPAVIYFDFVNPLHQGVIHGATR EEECCCCEEECCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TIPVETLATDVAAQCFLNALIRETQDWQIVPAAGHQPYPQLHIPLSSSHAIHIALCHIS CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEEEC PTQHHHYLFPAYLHQQGNDRQDDDTPVKLGIEQLVTLLLEKPTVKGELSDDVVARFRQRV CCCCCCEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LESHDNTQQAINIRLDWPSLRDKPLNFAQAEQGLLAGHAFHPAPKSHQPFNEKQAQRYLP HHCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHHHH DFASRFPLRWFAVDKRYLCGDSLKLTLQHRLQRFASESAPQLLAYFTDDVWLLPMHPWQA HHHHHCCEEEEEECCCEECCCCHHHHHHHHHHHHHCCCCCHHHHEECCCEEEEECCCCCH DHLLKQDWCQQLVQQNALHDLGEAGERWLPTSSSRSLYSPSNRDMVKFSLSVRLTNSVRT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEE LSVKEAKRGMRLARLAQTPRWQELQARYPTFRVMQEDGWAGLRSADFTLQEESLLVLRDN EEHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCEECCCCEEEEECC LLFSQPDSQTNVLVTLTQAAPDGGDSLLASAVRRLAARLNLPLQQAAFCWLDAYCQHVLL EEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH PLFSTEADYGLVLLAHQQNILVEMQQDLPVGMLYRDCQGSGFTQSALPWLAEIGEAEAEN HHHCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCHHHCC SFSEQQLLRYFPYYLLVNSSLAVTAALAAAGFDSEENLMVRVRDALSALRTCAKNTLCLD CCCHHHHHHHCCHHEEECCCHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHCCCEEEE YVLDSPHWHCKGNFFCYLHDHNENTIVDPAVIYFDFVNPLHQGVIHGATR EEECCCCEEECCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; citrate; N6-acetyl-N6-hydroxylysine
Specific reaction: 4 ATP + citrate + N6-acetyl-N6-hydroxylysine = 4 ADP + 4 phosphate + aerobactin
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8003107 [H]