| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is pepP [H]
Identifier: 153947930
GI number: 153947930
Start: 1038787
End: 1040100
Strand: Direct
Name: pepP [H]
Synonym: YpsIP31758_0860
Alternate gene names: 153947930
Gene position: 1038787-1040100 (Clockwise)
Preceding gene: 153947602
Following gene: 153948251
Centisome position: 21.99
GC content: 51.52
Gene sequence:
>1314_bases ATGACTCAGCAAGAATACCAGAACCGCCGTCAGGCACTGTTGGCGAAAATGGCCCCTGGCAGTGCTGCTATTATTTTTGC CGCACCAGAAGCCACACGCAGTGCAGACTCTGAATATCCTTATCGGCAGAATAGTGATTTTAGCTATCTGACGGGCTTCA ACGAGCCAGAAGCGGTGTTGATTCTGGTTAAAAGCGATGAGACTCATAACCACAGCGTGCTGTTTAACCGGGTTCGGGAT TTAACCGCTGAGATCTGGTTTGGTCGTCGGTTAGGGCAAGAGGCCGCCCCCACGAAACTGGCAGTAGATCGCGCATTACC TTTCGATGAAATCAACGAGCAGCTCTATTTGCTGCTTAATCGCCTGGATGTGATTTATCACGCTCAAGGGCAATATGCTT ACGCAGATAATATTGTTTTTGCTGCACTGGAAAAATTACGTCATGGTTTTCGTAAAAATCTGCGAGCGCCAGCCACGTTA ACCGATTGGCGGCCTTGGTTGCATGAAATGCGTCTGTTTAAATCAGCCGAAGAGATCGCCGTGCTGCGCCGCGCCGGTGA AATCAGCGCACTGGCCCATACCCGTGCGATGGAAAAATGCCGCCCCGGTATGTTTGAATATCAATTGGAAGGGGAAATTC TGCATGAATTTACCCGCCATGGCGCGCGTTATCCAGCGTACAACACCATCGTTGGTGGGGGTGAAAACGGCTGCATTTTG CACTATACCGAGAATGAGTGTGAGCTGCGGGACGGGGATTTGGTGCTTATCGACGCAGGTTGTGAATACCGTGGCTATGC CGGTGATATCACTCGTACTTTCCCGGTAAATGGCAAGTTTACCCCTGCTCAGCGGGCGGTTTATGACATCGTTCTGGCGG CTATCAATAAATCGCTGGCGTTGTTCCGCCCCGGTACCAGCATCCGTGAGGTCACGGAAGAGGTGGTGCGGATCATGGTC GTCGGTTTGGTGGAGTTGGGTATTCTGAAAGGTGATATCGAACAGTTGATCGCTGAACAAGCCCATCGGCCATTCTTTAT GCATGGCCTAAGCCACTGGCTGGGGATGGATGTCCATGACGTCGGCGATTACGGTAGCAGTGACCGTGGCCGTATCCTTG AACCGGGCATGGTATTAACCGTGGAACCGGGCTTGTACATTGCCCCAGATGCCGATGTCCCGCCGCAATACCGGGGCATT GGTATTCGTATTGAAGATGACATTGTGATTACCGCCACGGGTAACGAAAACTTGACCGCGAGCGTGGTTAAAGACCCTGA TGACATTGAAGCATTGATGGCATTGAATCATTGA
Upstream 100 bases:
>100_bases GACACTGCATTGATTTTGAACAATGGGCTGATTTTATCAATTGGCAAGTGTGGTGAAGTGAGTTTCAGGTGATGCAAACC GGATATTTCAGGAGAAGGTC
Downstream 100 bases:
>100_bases TGGTATTGAAGCATTGATGGCATTGAATCACTGATGGTATTGAATCATTGATGGCATTGAATCACTGATGGTATTGAATC ATTGATGGCATTGAATCATT
Product: proline aminopeptidase P II
Products: NA
Alternate protein names: Aminoacylproline aminopeptidase; Aminopeptidase P II; APP-II; X-Pro aminopeptidase [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVLILVKSDETHNHSVLFNRVRD LTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLNRLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATL TDWRPWLHEMRLFKSAEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCIL HYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLALFRPGTSIREVTEEVVRIMV VGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHDVGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGI GIRIEDDIVITATGNENLTASVVKDPDDIEALMALNH
Sequences:
>Translated_437_residues MTQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVLILVKSDETHNHSVLFNRVRD LTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLNRLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATL TDWRPWLHEMRLFKSAEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCIL HYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLALFRPGTSIREVTEEVVRIMV VGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHDVGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGI GIRIEDDIVITATGNENLTASVVKDPDDIEALMALNH >Mature_436_residues TQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVLILVKSDETHNHSVLFNRVRDL TAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLNRLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATLT DWRPWLHEMRLFKSAEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCILH YTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLALFRPGTSIREVTEEVVRIMVV GLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHDVGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGIG IRIEDDIVITATGNENLTASVVKDPDDIEALMALNH
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=448, Percent_Identity=33.0357142857143, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI149589008, Length=450, Percent_Identity=32.6666666666667, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI260593665, Length=308, Percent_Identity=37.6623376623377, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI260593663, Length=342, Percent_Identity=33.0409356725146, Blast_Score=161, Evalue=1e-39, Organism=Escherichia coli, GI1789275, Length=433, Percent_Identity=82.2170900692841, Blast_Score=748, Evalue=0.0, Organism=Escherichia coli, GI1790282, Length=292, Percent_Identity=32.1917808219178, Blast_Score=111, Evalue=7e-26, Organism=Escherichia coli, GI1788728, Length=255, Percent_Identity=30.1960784313725, Blast_Score=108, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17508215, Length=470, Percent_Identity=31.7021276595745, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71989583, Length=372, Percent_Identity=27.9569892473118, Blast_Score=139, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6320922, Length=441, Percent_Identity=32.4263038548753, Blast_Score=209, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6321118, Length=451, Percent_Identity=29.2682926829268, Blast_Score=172, Evalue=8e-44, Organism=Drosophila melanogaster, GI19920384, Length=416, Percent_Identity=37.2596153846154, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI21357079, Length=451, Percent_Identity=34.3680709534368, Blast_Score=206, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR007865 - InterPro: IPR001131 [H]
Pfam domain/function: PF05195 AMP_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.11.9 [H]
Molecular weight: Translated: 49028; Mature: 48897
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00491 PROLINE_PEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVL CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEE ILVKSDETHNHSVLFNRVRDLTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLN EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHCCCHHHHHHHHHHHHH RLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATLTDWRPWLHEMRLFKSAEEIA HHHEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH VLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCIL HHHHCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCEEECCCCCEEE HYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLA EEECCCCEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEE LFRPGTSIREVTEEVVRIMVVGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHD EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH VGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGIGIRIEDDIVITATGNENLTA CCCCCCCCCCCEECCCEEEEECCCEEECCCCCCCCCCCEEEEEEECCEEEEEECCCCEEE SVVKDPDDIEALMALNH EEECCCHHHHHHHHCCC >Mature Secondary Structure TQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVL CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEE ILVKSDETHNHSVLFNRVRDLTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLN EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHCCCHHHHHHHHHHHHH RLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATLTDWRPWLHEMRLFKSAEEIA HHHEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH VLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCIL HHHHCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCEEECCCCCEEE HYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLA EEECCCCEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEE LFRPGTSIREVTEEVVRIMVVGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHD EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH VGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGIGIRIEDDIVITATGNENLTA CCCCCCCCCCCEECCCEEEEECCCEEECCCCCCCCCCCEEEEEEECCEEEEEECCCCEEE SVVKDPDDIEALMALNH EEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2659585; 1339425; 9278503; 9520390 [H]