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The map label for this gene is yafE [H]

Identifier: 153947871

GI number: 153947871

Start: 3541117

End: 3541731

Strand: Reverse

Name: yafE [H]

Synonym: YpsIP31758_3145

Alternate gene names: 153947871

Gene position: 3541731-3541117 (Counterclockwise)

Preceding gene: 153948423

Following gene: 153948394

Centisome position: 74.98

GC content: 42.44

Gene sequence:

>615_bases
TTGCTTCACATTCTCTGGTCACTGGATAGCACGGTAAAAAATCAAAACCATGTCGTATCCTATGATCTCTCCGCTCAAAT
ATTACAGGTTGTCATGCAGGCCGCAGCAGATAAAAAACTCACTAATATTGAGATACAACAAGGGCTGGCTGAATCATTGC
CTTTTGCTGATCAAAGCTTTGATATTGTTATCAGCCGTTATTCTGCACACCATTGGCACGATGTTGGGAAAGCTTTACGT
GAAGTTAAGCGGGTATTACGGCCCGGTGGAAAAGTCATCTTCATGGATGTGGTTTCTCCCGGACATCCGGTATTGGATAT
CTATTTGCAAACAGTAGAAGTCTTACGTGATACCTCGCATGTGCGAAATTACTCTCCTGGAGAATGGCTATCTTTATTTA
CCGAGGGTGGGTTAGTAATAAATGAAGTAACTTCTGACCGCTTGTATTTGGAGTTCAGCAGTTGGATTGCCAGAATGCGT
ACACCTGTACATTTTGCTACGGCTATTCGCGAGTTACAAAAGTTAGCATCTGACGGTGTCATTAATCACTATGCTATTCA
GGCTGATGGTTCCTTTACCAGCGATATCATGATGATTGTTGCAGTAAGAGACTAA

Upstream 100 bases:

>100_bases
GCCGCATGGATGGCTCGCCCGATAATCAGATTTCCAGGTTTATTCCGTTTGCCATTTTGCAAGCGCCACCTGAATATTGC
TTTTATCCAAAAAACGGTCA

Downstream 100 bases:

>100_bases
TAAACAATAAGTGTGGATGGTGGTAATAATATATCAATATTCACATTTAGATTTATATAAATATATTTTTATTATGGATA
ATGAGGTTATATCCTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLHILWSLDSTVKNQNHVVSYDLSAQILQVVMQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALR
EVKRVLRPGGKVIFMDVVSPGHPVLDIYLQTVEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLEFSSWIARMR
TPVHFATAIRELQKLASDGVINHYAIQADGSFTSDIMMIVAVRD

Sequences:

>Translated_204_residues
MLHILWSLDSTVKNQNHVVSYDLSAQILQVVMQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALR
EVKRVLRPGGKVIFMDVVSPGHPVLDIYLQTVEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLEFSSWIARMR
TPVHFATAIRELQKLASDGVINHYAIQADGSFTSDIMMIVAVRD
>Mature_204_residues
MLHILWSLDSTVKNQNHVVSYDLSAQILQVVMQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALR
EVKRVLRPGGKVIFMDVVSPGHPVLDIYLQTVEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLEFSSWIARMR
TPVHFATAIRELQKLASDGVINHYAIQADGSFTSDIMMIVAVRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=189, Percent_Identity=63.4920634920635, Blast_Score=253, Evalue=9e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 22987; Mature: 22987

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHILWSLDSTVKNQNHVVSYDLSAQILQVVMQAAADKKLTNIEIQQGLAESLPFADQSF
CEEEEEECCHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCH
DIVISRYSAHHWHDVGKALREVKRVLRPGGKVIFMDVVSPGHPVLDIYLQTVEVLRDTSH
HEEEEHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
VRNYSPGEWLSLFTEGGLVINEVTSDRLYLEFSSWIARMRTPVHFATAIRELQKLASDGV
HCCCCCHHHHHHHHCCCEEEEEECCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
INHYAIQADGSFTSDIMMIVAVRD
EEEEEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MLHILWSLDSTVKNQNHVVSYDLSAQILQVVMQAAADKKLTNIEIQQGLAESLPFADQSF
CEEEEEECCHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCH
DIVISRYSAHHWHDVGKALREVKRVLRPGGKVIFMDVVSPGHPVLDIYLQTVEVLRDTSH
HEEEEHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
VRNYSPGEWLSLFTEGGLVINEVTSDRLYLEFSSWIARMRTPVHFATAIRELQKLASDGV
HCCCCCHHHHHHHHCCCEEEEEECCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
INHYAIQADGSFTSDIMMIVAVRD
EEEEEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]