| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947850
Identifier: 153947850
GI number: 153947850
Start: 4213859
End: 4214401
Strand: Reverse
Name: 153947850
Synonym: YpsIP31758_3740
Alternate gene names: NA
Gene position: 4214401-4213859 (Counterclockwise)
Preceding gene: 153949142
Following gene: 153947251
Centisome position: 89.23
GC content: 44.38
Gene sequence:
>543_bases ATGACTTCAACCAGCGCGGTTGCAACTAATAATATTCCTACAAACAATATTTCTACAAACAATGTTCCTACAAATAAAGC ACCCAATTCTCCTCCTCAGTCTCGGGCTGAATATTTCAATCTGAATGTCACCGGTATCGGCTACCTCAATAATATTCGTA AGGTCTCAGGTAATAATGGTGAGTTCACCTGTGCCGTAATCAATGCTCTTACTGGGCCGACCGATAATGCGTCTTACACG CGTTTTGATATCACCGTTGCGGGCAAAGAAAGTGCTTCTCTTATCAACCGCTGCCAAAAGGCGGTGGATGAAGAGAAACA GGTGCTCATTGGTTTTGTACTCAGTGGGCTGGTTGCTGATGTGTTTACTCTGACTAAGGGTGATCATGCCGGTGAAAGCC GACCTGCGCTTAAAGCCAGATTGATTGCGGTTGAGTGGGTCAAGATTAGTGGCCAACTGGTTTATAAGTCAGAAAAACCA ACTTCAATGCCGCCAGCGCAAAATGAACCTCAGCATCAAAGTTACGCTGAAAATTCATTCTAA
Upstream 100 bases:
>100_bases CCCAGTCAGTGGCTAAGTTACTGACTTCCCTGCGGGAAACTTTCCCCGTAAGGGATGATTGTTTCTCCGCACTGCTTATT TTCACTCTGGAGAAAACACC
Downstream 100 bases:
>100_bases GCCGATATGGATATACACCTGCCCAGCGGGTTCGGGTAGGGTGTCTGCCGTGCTGTGTTCTATGCGATAGCTTAACTATC ATCGCTGGTATTGCGGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTSTSAVATNNIPTNNISTNNVPTNKAPNSPPQSRAEYFNLNVTGIGYLNNIRKVSGNNGEFTCAVINALTGPTDNASYT RFDITVAGKESASLINRCQKAVDEEKQVLIGFVLSGLVADVFTLTKGDHAGESRPALKARLIAVEWVKISGQLVYKSEKP TSMPPAQNEPQHQSYAENSF
Sequences:
>Translated_180_residues MTSTSAVATNNIPTNNISTNNVPTNKAPNSPPQSRAEYFNLNVTGIGYLNNIRKVSGNNGEFTCAVINALTGPTDNASYT RFDITVAGKESASLINRCQKAVDEEKQVLIGFVLSGLVADVFTLTKGDHAGESRPALKARLIAVEWVKISGQLVYKSEKP TSMPPAQNEPQHQSYAENSF >Mature_179_residues TSTSAVATNNIPTNNISTNNVPTNKAPNSPPQSRAEYFNLNVTGIGYLNNIRKVSGNNGEFTCAVINALTGPTDNASYTR FDITVAGKESASLINRCQKAVDEEKQVLIGFVLSGLVADVFTLTKGDHAGESRPALKARLIAVEWVKISGQLVYKSEKPT SMPPAQNEPQHQSYAENSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19375; Mature: 19244
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTSAVATNNIPTNNISTNNVPTNKAPNSPPQSRAEYFNLNVTGIGYLNNIRKVSGNNG CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECEEEEEHHHCCEEECCCCCC EFTCAVINALTGPTDNASYTRFDITVAGKESASLINRCQKAVDEEKQVLIGFVLSGLVAD CEEEEEEECCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH VFTLTKGDHAGESRPALKARLIAVEWVKISGQLVYKSEKPTSMPPAQNEPQHQSYAENSF HHHHCCCCCCCCCCCCHHEEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure TSTSAVATNNIPTNNISTNNVPTNKAPNSPPQSRAEYFNLNVTGIGYLNNIRKVSGNNG CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECEEEEEHHHCCEEECCCCCC EFTCAVINALTGPTDNASYTRFDITVAGKESASLINRCQKAVDEEKQVLIGFVLSGLVAD CEEEEEEECCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH VFTLTKGDHAGESRPALKARLIAVEWVKISGQLVYKSEKPTSMPPAQNEPQHQSYAENSF HHHHCCCCCCCCCCCCHHEEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA