| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is manA [H]
Identifier: 153947728
GI number: 153947728
Start: 2171447
End: 2172622
Strand: Direct
Name: manA [H]
Synonym: YpsIP31758_1874
Alternate gene names: 153947728
Gene position: 2171447-2172622 (Clockwise)
Preceding gene: 153948971
Following gene: 153947056
Centisome position: 45.97
GC content: 48.64
Gene sequence:
>1176_bases ATGCTAAAAATGAATAACGCAGTTCAAAACTATGCTTGGGGCAGTACTGATGCCCTGACCCAGCTTTATGGCATACCTAA CCCACAAGGAATGCCAATGGCTGAACTGTGGATGGGGGCGCACCCGAAAAGCAGTTCCCAGGTTCTTGACGCAAATGGCC AGTGGCATTCATTACGTGATGTGATTGATCAAGATCCAGATAACACGCTGGGGAGTGATATTTTCAAGCGCTTTGGTGAA CTGCCATTCCTGTTCAAAGTACTTTGTGCAGCTCAACCTCTATCGATTCAGGTTCACCCGAGCAAAGCGGCAGCAGAGGT CGGTTTTGCTAAAGAAAACCAGGCAGGTATCCCACTGGATGCGGCTGAGCGCAATTATAAAGATGCGAACCATAAGCCTG AGCTGGTTTATGCCCTCACCCCTTTTCAGGCAATGAATGGTTTTCGCACACTAGAAGATATCCAGGCGCTGTTACAACCA CTAGCAGCGGCACACCCTGATATTGCCGCGTTCTTGCGCCAACCCGATACTGAGCATTTAGCCAGTTTATTTGCCAGCTT ACTCAGTATGAGCGGTGAGACAAAAACGCGGGCACTCGGTATTCTGAAAGCGGCATTGAATAGCCAACTCGGAGAGCCTT GGGATACGATCCGCAGCATTTCGTGTTTTTATCCCGATGACAGCGGGTTGTTCTCCCCACTACTGCTTAATGTCGTGACA TTGCAACCGGGTGAGGCCATGTTCCTTTATGCCGAAACACCGCACGCTTACCTCAATGGGGTTGCATTAGAGGTCATGGC AAACTCGGATAATGTGTTGAGAGCCGGGCTAACGCCGAAGTTTATTGATATTCCAGAGTTAATGTCCAATCTGCAATTTA TCCCTAAACCGGCTAATGCCCTACTCACAACACCAAAGCAGCAGGGTAATGAACTGATATTCCCTATTCCTGTCGAGGAC TTCGCTTTCTCACTGCATACCTTGGTGGCTGAACCACACGTTCTGGCACAACACAGTGCGGCAATTATTTTTTGTGTTGA AGGCTGTGCGGTGCTGAAAAAACAAGAGCAAGAAATTACGCTGCACCCTGGTGAGTCTTGCTTCATATCGGCTAAGGAAT CACCTGTAACCGTGCAAGGGGTGGGTTCAATTGCTCGTGTTTATAACGAGGTGTGA
Upstream 100 bases:
>100_bases ACTAATGGCTTATTTTTTCAGGGTTTGCTATCCAGAACCGGTTAATCACTGGCTAACGCGCAGCCTTATTTTAGTCCTTT GCAAACGGCAGATCATAAAC
Downstream 100 bases:
>100_bases ACTAACTTAATGAATTTGTTGTCAATAAATAGCTTCTCACCATAAATTGAAGGCTCTGTCGCGATTAAGTCCTTGTTACG GTCGCAATAATATTTGTGTA
Product: mannose-6-phosphate isomerase, class I
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MLKMNNAVQNYAWGSTDALTQLYGIPNPQGMPMAELWMGAHPKSSSQVLDANGQWHSLRDVIDQDPDNTLGSDIFKRFGE LPFLFKVLCAAQPLSIQVHPSKAAAEVGFAKENQAGIPLDAAERNYKDANHKPELVYALTPFQAMNGFRTLEDIQALLQP LAAAHPDIAAFLRQPDTEHLASLFASLLSMSGETKTRALGILKAALNSQLGEPWDTIRSISCFYPDDSGLFSPLLLNVVT LQPGEAMFLYAETPHAYLNGVALEVMANSDNVLRAGLTPKFIDIPELMSNLQFIPKPANALLTTPKQQGNELIFPIPVED FAFSLHTLVAEPHVLAQHSAAIIFCVEGCAVLKKQEQEITLHPGESCFISAKESPVTVQGVGSIARVYNEV
Sequences:
>Translated_391_residues MLKMNNAVQNYAWGSTDALTQLYGIPNPQGMPMAELWMGAHPKSSSQVLDANGQWHSLRDVIDQDPDNTLGSDIFKRFGE LPFLFKVLCAAQPLSIQVHPSKAAAEVGFAKENQAGIPLDAAERNYKDANHKPELVYALTPFQAMNGFRTLEDIQALLQP LAAAHPDIAAFLRQPDTEHLASLFASLLSMSGETKTRALGILKAALNSQLGEPWDTIRSISCFYPDDSGLFSPLLLNVVT LQPGEAMFLYAETPHAYLNGVALEVMANSDNVLRAGLTPKFIDIPELMSNLQFIPKPANALLTTPKQQGNELIFPIPVED FAFSLHTLVAEPHVLAQHSAAIIFCVEGCAVLKKQEQEITLHPGESCFISAKESPVTVQGVGSIARVYNEV >Mature_391_residues MLKMNNAVQNYAWGSTDALTQLYGIPNPQGMPMAELWMGAHPKSSSQVLDANGQWHSLRDVIDQDPDNTLGSDIFKRFGE LPFLFKVLCAAQPLSIQVHPSKAAAEVGFAKENQAGIPLDAAERNYKDANHKPELVYALTPFQAMNGFRTLEDIQALLQP LAAAHPDIAAFLRQPDTEHLASLFASLLSMSGETKTRALGILKAALNSQLGEPWDTIRSISCFYPDDSGLFSPLLLNVVT LQPGEAMFLYAETPHAYLNGVALEVMANSDNVLRAGLTPKFIDIPELMSNLQFIPKPANALLTTPKQQGNELIFPIPVED FAFSLHTLVAEPHVLAQHSAAIIFCVEGCAVLKKQEQEITLHPGESCFISAKESPVTVQGVGSIARVYNEV
Specific function: Involved in the conversion of glucose to GDP-L-fucose, which can be converted to L-fucose, a capsular polysaccharide [H]
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI4505235, Length=409, Percent_Identity=36.4303178484108, Blast_Score=207, Evalue=2e-53, Organism=Escherichia coli, GI1787899, Length=391, Percent_Identity=70.843989769821, Blast_Score=565, Evalue=1e-162, Organism=Caenorhabditis elegans, GI71997620, Length=405, Percent_Identity=32.0987654320988, Blast_Score=157, Evalue=8e-39, Organism=Caenorhabditis elegans, GI17557650, Length=340, Percent_Identity=30.2941176470588, Blast_Score=132, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6320839, Length=414, Percent_Identity=31.8840579710145, Blast_Score=185, Evalue=1e-47, Organism=Drosophila melanogaster, GI21356061, Length=397, Percent_Identity=29.4710327455919, Blast_Score=147, Evalue=8e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR016305 - InterPro: IPR018050 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 42614; Mature: 42614
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00965 PMI_I_1 ; PS00966 PMI_I_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKMNNAVQNYAWGSTDALTQLYGIPNPQGMPMAELWMGAHPKSSSQVLDANGQWHSLRD CCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCHHHHHH VIDQDPDNTLGSDIFKRFGELPFLFKVLCAAQPLSIQVHPSKAAAEVGFAKENQAGIPLD HHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCCCCCCCCC AAERNYKDANHKPELVYALTPFQAMNGFRTLEDIQALLQPLAAAHPDIAAFLRQPDTEHL HHHCCCCCCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHH ASLFASLLSMSGETKTRALGILKAALNSQLGEPWDTIRSISCFYPDDSGLFSPLLLNVVT HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEECCCCCCCHHHHHHEEEE LQPGEAMFLYAETPHAYLNGVALEVMANSDNVLRAGLTPKFIDIPELMSNLQFIPKPANA ECCCCEEEEEECCCHHHHCCEEEEEEECCCCEEEECCCCCEECHHHHHHCCEECCCCCHH LLTTPKQQGNELIFPIPVEDFAFSLHTLVAEPHVLAQHSAAIIFCVEGCAVLKKQEQEIT EEECCHHCCCEEEEECCHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCHHHHHCCCCEEE LHPGESCFISAKESPVTVQGVGSIARVYNEV ECCCCCEEEECCCCCEEEEHHHHHHHHHHCC >Mature Secondary Structure MLKMNNAVQNYAWGSTDALTQLYGIPNPQGMPMAELWMGAHPKSSSQVLDANGQWHSLRD CCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCHHHHHH VIDQDPDNTLGSDIFKRFGELPFLFKVLCAAQPLSIQVHPSKAAAEVGFAKENQAGIPLD HHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCCCCCCCCC AAERNYKDANHKPELVYALTPFQAMNGFRTLEDIQALLQPLAAAHPDIAAFLRQPDTEHL HHHCCCCCCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHH ASLFASLLSMSGETKTRALGILKAALNSQLGEPWDTIRSISCFYPDDSGLFSPLLLNVVT HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEECCCCCCCHHHHHHEEEE LQPGEAMFLYAETPHAYLNGVALEVMANSDNVLRAGLTPKFIDIPELMSNLQFIPKPANA ECCCCEEEEEECCCHHHHCCEEEEEEECCCCEEEECCCCCEECHHHHHHCCEECCCCCHH LLTTPKQQGNELIFPIPVEDFAFSLHTLVAEPHVLAQHSAAIIFCVEGCAVLKKQEQEIT EEECCHHCCCEEEEECCHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCHHHHHCCCCEEE LHPGESCFISAKESPVTVQGVGSIARVYNEV ECCCCCEEEECCCCCEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1879695; 11677609 [H]