| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947720
Identifier: 153947720
GI number: 153947720
Start: 4222334
End: 4224904
Strand: Reverse
Name: 153947720
Synonym: YpsIP31758_3749
Alternate gene names: NA
Gene position: 4224904-4222334 (Counterclockwise)
Preceding gene: 153947551
Following gene: 153948317
Centisome position: 89.45
GC content: 34.27
Gene sequence:
>2571_bases GTGAGGGTTATATTTATGAGACAAGTAACGAAATCAAAGAAAATTAAAATCTTGCCATACCCAGAATGGTTAGTTAAGGC CGGGATGTCAAAAGGTATAGATCATGATAGGCAACATTTAGGCATTATTCTTGCTGCAGGTGAAATGATTAAAGTCAGAC AAGTCAATGCTGAATATAAGGAAAAACTTAAATTATATTTACTCAATGATAATAAAAATACTCAACGATCGATAAGTTTT AATACTGATTGGATAGAGCTGAGTGTCGATGCTGTTTCAGTACCCTTTATTAATACCCCATATAGTGATGGGATTATTCC TGAGATTATTTTTGAGTATCCGGATACTTCTAAATTACTGCCAGTTTATGAAAAAGGAGAGGATGAGAGCATCTTCTTTG AAAGTTGGGATAAACAGAATGCCGAGTTTGGCGTGGTAGAATCAGAATATGTAATAATTCTGATCCCGGAAGTTAGTAAG GACAGGCTAAAATCTTTCAGTACGAGTGGCGGTATTGATACAGTTTTGGGGTTTTATCAAGATATTTTTTCTTTCAATAA TTCTCTGGCTGGCTTGTCTTTTGAACCGCAAAGATATTCTGACGGAAACACACGAAATCGTTACTTTGCTAAAGCAGATA AAGGGGGCGGTGGGGCAGCATATTATTCTAATAATTGGATTGCCTCATCCTCTGGTTCTATAAATACATTTTGGCTTTCT CCCAATGCTACTAACTGGGGCTGCCTACATGAAATTGCGCATGGTTATCAGGGCGGGTTTATTGATGATAAATATTTTTC CACAAGAGAAGTATGGAATAATATTTATGCTGCCTGCTACCAAGATGTTATGTTAGGTGCTGAAAAGTTTAATAAAGGGT GGCTATATAATTTCGGTAAGCAAAAAGAGGTTGAAAAAAGTATTTTAAATAACATTAATAATGGTAAAGAAGTAAATGCT TGGGGGGAACGTAGCAAATTATATTTTATCATGCTGATGCTGGAAAAAGCGGGGGTAAATTGTTTTACTCATTTCAACCA GATATATCGTGAGCGTAAAAATACTGATCAAAGCGTAGGCTCGGTGTTAGATATGCTCTCAAATAGTTTCGCAACTGTTG AAAATCGAGTTGATGTTACACCATTTTTACAAATGGTTGGGGGACATATATCTAAAAATCAATATCAACGTAACTTATTT AGCCATGCAAAGGCGGTATATCCATTAAATCAACTCTTGCAAGGTGATGAACTCACTGCTGTTAAGAAAACGCTAGATTT GAATAGTGAACTCAGTCTTGTTGATGTGGATAGTATTGAATTTACAGATATAAAAAGTAATTTGACATTGCAATTTTCTA TAGATGATTTCGCTCAGATATATGGCGAAGAATTGCTTATACTGAATGGTGACAACTATGTGTATAATCAATCTATTATG GATAAAAAACAAACTTTATATAATCTCCCCGTTGGTGCTTATACATTGCGAATTCCAACAGGAAGAAATAAAAAATATGC ACCACAAATTAATTATCTGATAGTGAAAAATGAAGATAGCCAAACACAAGTTGATTTTGTCCACAGAATAGGATCTCCAA TTGTTTCACAAAAAATTTCTTTGCAGGGACTAAATGATTATACATTTGCAACTATATTTTTTGATCAAGAAAATGATACT GTCAGCGTTGATATTACTAAGACTAAACCACATTATCATTTCCCTGGCATGTATGCGAGAATAAGAATAAAAGACAAAGA TAATAATGAGCTACTCAATGAAGTTATTACAGGAACTAATCAATCGCTGAGTAAAAATGATTTTCCACTATCTTCTTGTT ATGTTATTGATATCTTTCACAAAGAGCCTGGTAGGGTAAAGCTAACTCCGGCATATAAAGGTGTGATTGATAATAAATCC AGTTACAATGAATTTATTATCACGCCTTATGGTTTGCAAAACATCAAATTGAATAATGATCCAAAGGTTTTTTTATTGGA AAATATAAAATCGGCAGCAGAAACGCTGCGTAGTCACCCTATAATGTGGCATGCGAATTTTTCAGAAGCTAAAGATAATA TATATTTGGCAATCGATATCTTTCCTAGCCCACAAAAGGAAGGTTTACTAGAGCAATATGCTGATTGTATTTCTTCCTAC TATGAAAAGCCAAATGAAGACTTGGGTAATGCATTTAGTTTTATCTTTAAAGGAATTAATGACCGAGAATTTTTGACAGC TAAGCTTAATTTAGTGACAAAAAAACTTGAAGTTAAAATTGTAAGTGGTACTCCACATAGTGGATTCAAAAGGACTTACG CTGTACTACGTTATTTTAATGCTGATGGAAATGAACTCCTTAATCTGGATATTATTGGTAGTAAAAAACAGGCTGGACAA GAGTGGGTATTCCCTATATCAGGTTATGGTGTAGAAAAACTCTATCTTCAACATGTGGAACCTAAAAATAGATTAGTGAT TACCAATATTATGCAAGGAATCAGATTATCATCGCGCACAAGCATACAAACCTATGAAATAGAATCTTTGGGGTTGAGTC GTTGCACCTGA
Upstream 100 bases:
>100_bases TTATATATGAAGTGCTAGATATATTTCAAAATAATTTTTTATATGTAAATATCACTAATGAATTACATTGGGGCTTTAAT CTATAAGTTATGTAATTTTA
Downstream 100 bases:
>100_bases CCCTAAGCGACATTTCTCATCGCACAAGCCACAACCGTCGATATGGCAGATTTACGTTGGCCTTAATGGGGAGCTGCGAT GAGTTTCATTGTGTTTAAAT
Product: viral enhancin protein
Products: NA
Alternate protein names: Enhancing Factor; Surface Associated Protein With Similarity Proteases; Viral Enhancin Protein; Metallprotease Enhancin Family
Number of amino acids: Translated: 856; Mature: 856
Protein sequence:
>856_residues MRVIFMRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKLYLLNDNKNTQRSISF NTDWIELSVDAVSVPFINTPYSDGIIPEIIFEYPDTSKLLPVYEKGEDESIFFESWDKQNAEFGVVESEYVIILIPEVSK DRLKSFSTSGGIDTVLGFYQDIFSFNNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLS PNATNWGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVEKSILNNINNGKEVNA WGERSKLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDMLSNSFATVENRVDVTPFLQMVGGHISKNQYQRNLF SHAKAVYPLNQLLQGDELTAVKKTLDLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIM DKKQTLYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLNDYTFATIFFDQENDT VSVDITKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSKNDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKS SYNEFIITPYGLQNIKLNNDPKVFLLENIKSAAETLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSY YEKPNEDLGNAFSFIFKGINDREFLTAKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNELLNLDIIGSKKQAGQ EWVFPISGYGVEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTYEIESLGLSRCT
Sequences:
>Translated_856_residues MRVIFMRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKLYLLNDNKNTQRSISF NTDWIELSVDAVSVPFINTPYSDGIIPEIIFEYPDTSKLLPVYEKGEDESIFFESWDKQNAEFGVVESEYVIILIPEVSK DRLKSFSTSGGIDTVLGFYQDIFSFNNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLS PNATNWGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVEKSILNNINNGKEVNA WGERSKLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDMLSNSFATVENRVDVTPFLQMVGGHISKNQYQRNLF SHAKAVYPLNQLLQGDELTAVKKTLDLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIM DKKQTLYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLNDYTFATIFFDQENDT VSVDITKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSKNDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKS SYNEFIITPYGLQNIKLNNDPKVFLLENIKSAAETLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSY YEKPNEDLGNAFSFIFKGINDREFLTAKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNELLNLDIIGSKKQAGQ EWVFPISGYGVEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTYEIESLGLSRCT >Mature_856_residues MRVIFMRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKLYLLNDNKNTQRSISF NTDWIELSVDAVSVPFINTPYSDGIIPEIIFEYPDTSKLLPVYEKGEDESIFFESWDKQNAEFGVVESEYVIILIPEVSK DRLKSFSTSGGIDTVLGFYQDIFSFNNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLS PNATNWGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVEKSILNNINNGKEVNA WGERSKLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDMLSNSFATVENRVDVTPFLQMVGGHISKNQYQRNLF SHAKAVYPLNQLLQGDELTAVKKTLDLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIM DKKQTLYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLNDYTFATIFFDQENDT VSVDITKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSKNDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKS SYNEFIITPYGLQNIKLNNDPKVFLLENIKSAAETLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSY YEKPNEDLGNAFSFIFKGINDREFLTAKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNELLNLDIIGSKKQAGQ EWVFPISGYGVEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTYEIESLGLSRCT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97548; Mature: 97548
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVIFMRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYK CEEEEEEHHCCCCCEEEEECHHHHHHCCHHCCCCCCCHHEEEEEECCCEEEEEECCHHHC EKLKLYLLNDNKNTQRSISFNTDWIELSVDAVSVPFINTPYSDGIIPEIIFEYPDTSKLL CCEEEEEEECCCCCCEEEEECCCEEEEEEEEEEECEECCCCCCCCCHHHEECCCCCCCCC PVYEKGEDESIFFESWDKQNAEFGVVESEYVIILIPEVSKDRLKSFSTSGGIDTVLGFYQ CCEECCCCCEEEEECCCCCCCCCCEEECCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHH DIFSFNNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLS HHHHHCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCEEEEEECCEEEECCCCEEEEEEC PNATNWGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGK CCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC QKEVEKSILNNINNGKEVNAWGERSKLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVG HHHHHHHHHHCCCCCCEECCCCCCCCEEEEEEEEHHCCCHHHHHHHHHHHHHCCCHHHHH SVLDMLSNSFATVENRVDVTPFLQMVGGHISKNQYQRNLFSHAKAVYPLNQLLQGDELTA HHHHHHCCCHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHH VKKTLDLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIM HHHHHCCCCCEEEEEECCEEEEEECCCEEEEEEHHHHHHHCCCEEEEECCCCEEECCHHH DKKQTLYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKIS HHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHCEEE LQGLNDYTFATIFFDQENDTVSVDITKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTN ECCCCCEEEEEEEEECCCCEEEEEEEECCCCEECCCEEEEEEEECCCCHHHHHHHHCCCC QSLSKNDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKSSYNEFIITPYGLQNIKLNND CCCCCCCCCCCEEEEEEEEECCCCCEEECHHHCCCCCCCCCCCCEEEECCCCEEEEECCC PKVFLLENIKSAAETLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSY CCEEEEHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH YEKPNEDLGNAFSFIFKGINDREFLTAKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFN HCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHEEEC ADGNELLNLDIIGSKKQAGQEWVFPISGYGVEKLYLQHVEPKNRLVITNIMQGIRLSSRT CCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCEEEEHHHHHCCCCCCC SIQTYEIESLGLSRCT CEEEEEECCCCCCCCC >Mature Secondary Structure MRVIFMRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYK CEEEEEEHHCCCCCEEEEECHHHHHHCCHHCCCCCCCHHEEEEEECCCEEEEEECCHHHC EKLKLYLLNDNKNTQRSISFNTDWIELSVDAVSVPFINTPYSDGIIPEIIFEYPDTSKLL CCEEEEEEECCCCCCEEEEECCCEEEEEEEEEEECEECCCCCCCCCHHHEECCCCCCCCC PVYEKGEDESIFFESWDKQNAEFGVVESEYVIILIPEVSKDRLKSFSTSGGIDTVLGFYQ CCEECCCCCEEEEECCCCCCCCCCEEECCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHH DIFSFNNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLS HHHHHCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCEEEEEECCEEEECCCCEEEEEEC PNATNWGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGK CCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC QKEVEKSILNNINNGKEVNAWGERSKLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVG HHHHHHHHHHCCCCCCEECCCCCCCCEEEEEEEEHHCCCHHHHHHHHHHHHHCCCHHHHH SVLDMLSNSFATVENRVDVTPFLQMVGGHISKNQYQRNLFSHAKAVYPLNQLLQGDELTA HHHHHHCCCHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHH VKKTLDLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIM HHHHHCCCCCEEEEEECCEEEEEECCCEEEEEEHHHHHHHCCCEEEEECCCCEEECCHHH DKKQTLYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKIS HHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHCEEE LQGLNDYTFATIFFDQENDTVSVDITKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTN ECCCCCEEEEEEEEECCCCEEEEEEEECCCCEECCCEEEEEEEECCCCHHHHHHHHCCCC QSLSKNDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKSSYNEFIITPYGLQNIKLNND CCCCCCCCCCCEEEEEEEEECCCCCEEECHHHCCCCCCCCCCCCEEEECCCCEEEEECCC PKVFLLENIKSAAETLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSY CCEEEEHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH YEKPNEDLGNAFSFIFKGINDREFLTAKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFN HCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHEEEC ADGNELLNLDIIGSKKQAGQEWVFPISGYGVEKLYLQHVEPKNRLVITNIMQGIRLSSRT CCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCEEEEHHHHHCCCCCCC SIQTYEIESLGLSRCT CEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA