| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947646
Identifier: 153947646
GI number: 153947646
Start: 1015574
End: 1015729
Strand: Reverse
Name: 153947646
Synonym: YpsIP31758_0838
Alternate gene names: NA
Gene position: 1015729-1015574 (Counterclockwise)
Preceding gene: 153947218
Following gene: 153949952
Centisome position: 21.5
GC content: 46.15
Gene sequence:
>156_bases TTGTCAGCGACCCAAAAGCTAATTGAGCCCTATTTTCAGCTCAATCGCCCTCCCCATCACACCTTGTCACGGATGTCGTT ATTTTCTGATGGGGTGATGTTATTTTCTGATGAGGTGGTGCTATTTCCTGATGGGCTGCAATTTTCGATTGGCTGA
Upstream 100 bases:
>100_bases GGGTCTGGGATCGTCAATATCCCGTCACCGACTGGGAATGCTTACGCGATGAGCGAATTGCGAAAACTCAAGGTAATCAT AATCCTTATGTACAACGCGC
Downstream 100 bases:
>100_bases AACTTCCCTGCCTCTGCTATCCTTAGCTGCTTATTTATTTTGCGTTTATTTCGCGCGGTACTCATCACCGCACGGTATGA TTTTCGTTTCAGGACTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MSATQKLIEPYFQLNRPPHHTLSRMSLFSDGVMLFSDEVVLFPDGLQFSIG
Sequences:
>Translated_51_residues MSATQKLIEPYFQLNRPPHHTLSRMSLFSDGVMLFSDEVVLFPDGLQFSIG >Mature_50_residues SATQKLIEPYFQLNRPPHHTLSRMSLFSDGVMLFSDEVVLFPDGLQFSIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5799; Mature: 5668
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATQKLIEPYFQLNRPPHHTLSRMSLFSDGVMLFSDEVVLFPDGLQFSIG CCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCEEECCCCEEEECC >Mature Secondary Structure SATQKLIEPYFQLNRPPHHTLSRMSLFSDGVMLFSDEVVLFPDGLQFSIG CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA