| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is aaeA [H]
Identifier: 153947637
GI number: 153947637
Start: 496906
End: 497841
Strand: Direct
Name: aaeA [H]
Synonym: YpsIP31758_0420
Alternate gene names: 153947637
Gene position: 496906-497841 (Clockwise)
Preceding gene: 153949632
Following gene: 153947237
Centisome position: 10.52
GC content: 51.71
Gene sequence:
>936_bases GTGAGTACATTTTCATTAAAAATAATCCGCGTTGGCATCACCGTCTTGGTGGTCGTACTGGCTGTTATCGCGATTTTCAA CGTGTGGGCCTTCTATACTGAATCGCCGTGGACCCGTGATGCTAAATTTACCGCAGACGTGGTCGCTATCGCACCGGATG TCAGCGGCTTACTGACCGAAGTACCGGTAAAAGACAACCAACTGGTGCAGAAAGGCCAGATTCTGTTTGTCATTGATCAG CCCCGTTATCAGCAAGCGTTGGCCGAAGCCGAGGCCGATGTGGCTTATTACCAGACCTTGGCTGCGGAGAAGCAACGGGA GTTCAGCAGGCGGCACCTCCTGGGTATTCAGGCACTGTCACAAGAAGAGATTGACCAGGCAAGCAATGTGTTACAAACCG TCCAGCATCAGCTGGCAAAAACCATTGCCGTGAGGAATTTAGCCCGCCTTGATCTGGAAAGAACCACGATACGTGCACCA GCAGAAGGGTGGGTGACCAACCTGAATGTACATGCTGGTGAGTTTATTAACCGTGGGGCCACGGCAGTCGCATTGGTGAA AAAAGATACTTTTTACATTTTAGCCTATCTGGAGGAGACGAAGCTCGAAGGGGTTAAACCGGGCTACCGAGCGGAAATTA CCCCACTGGGCAGTAACCGCATTCTGCATGGTACGGTCGATAGCATTTCAGCCGGTGTTACCAATAGCAGTAGCAGTGCC GACAGCAAAGGGCTGGCGACCATTGATAATAATCTTGAATGGGTACGCTTGGCGCAACGGGTACCGGTGAAGATTCATCT GGATAGCGAAGACCAGCAATATTTGTATCCGGCGGGCACCACGGCTACGGTGGTGATCACCGGGCCGAATGATCGTGATC CTCATCAGGCATCGCCCATGACCAAGTTGATGCATCGTCTACGTGAGTTTGGCTAA
Upstream 100 bases:
>100_bases ACCGGTATTTACGAGTTTGTTTGGCACCCGGCTCTTTTTAATACGGCGCTGTATTGTTGCCTGTTTTATTTAACATCCCG TCTTTTTTCCTGAGGTCACC
Downstream 100 bases:
>100_bases TATGACCCACCCAAGCTTTATTCGCCTGCGGTTTGCGTTCAAGCTGAGTTTTGCCATTGTGGCGGCATTATTTCTTGGCT TTCATCTGCAATTGGAAACA
Product: p-hydroxybenzoic acid efflux subunit AaeA
Products: NA
Alternate protein names: pHBA efflux pump protein A [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSTFSLKIIRVGITVLVVVLAVIAIFNVWAFYTESPWTRDAKFTADVVAIAPDVSGLLTEVPVKDNQLVQKGQILFVIDQ PRYQQALAEAEADVAYYQTLAAEKQREFSRRHLLGIQALSQEEIDQASNVLQTVQHQLAKTIAVRNLARLDLERTTIRAP AEGWVTNLNVHAGEFINRGATAVALVKKDTFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSA DSKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQASPMTKLMHRLREFG
Sequences:
>Translated_311_residues MSTFSLKIIRVGITVLVVVLAVIAIFNVWAFYTESPWTRDAKFTADVVAIAPDVSGLLTEVPVKDNQLVQKGQILFVIDQ PRYQQALAEAEADVAYYQTLAAEKQREFSRRHLLGIQALSQEEIDQASNVLQTVQHQLAKTIAVRNLARLDLERTTIRAP AEGWVTNLNVHAGEFINRGATAVALVKKDTFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSA DSKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQASPMTKLMHRLREFG >Mature_310_residues STFSLKIIRVGITVLVVVLAVIAIFNVWAFYTESPWTRDAKFTADVVAIAPDVSGLLTEVPVKDNQLVQKGQILFVIDQP RYQQALAEAEADVAYYQTLAAEKQREFSRRHLLGIQALSQEEIDQASNVLQTVQHQLAKTIAVRNLARLDLERTTIRAPA EGWVTNLNVHAGEFINRGATAVALVKKDTFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSAD SKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQASPMTKLMHRLREFG
Specific function: Unknown
COG id: COG1566
COG function: function code V; Multidrug resistance efflux pump
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789637, Length=311, Percent_Identity=72.0257234726688, Blast_Score=472, Evalue=1e-134, Organism=Escherichia coli, GI87081951, Length=283, Percent_Identity=38.5159010600707, Blast_Score=201, Evalue=6e-53, Organism=Escherichia coli, GI1790519, Length=311, Percent_Identity=29.2604501607717, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790024, Length=328, Percent_Identity=28.0487804878049, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI1788711, Length=345, Percent_Identity=24.6376811594203, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1789041, Length=307, Percent_Identity=24.4299674267101, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022871 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 34376; Mature: 34244
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFSLKIIRVGITVLVVVLAVIAIFNVWAFYTESPWTRDAKFTADVVAIAPDVSGLLTE CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHEE VPVKDNQLVQKGQILFVIDQPRYQQALAEAEADVAYYQTLAAEKQREFSRRHLLGIQALS CCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QEEIDQASNVLQTVQHQLAKTIAVRNLARLDLERTTIRAPAEGWVTNLNVHAGEFINRGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEECCCCCCCEEEEEEEHHHHHHCCC TAVALVKKDTFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSA EEEEEEECCCEEEEEEEEHHHCCCCCCCCCEEEEECCCCCEEEECHHHHHCCCCCCCCCC DSKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQASPM CCCCCEEECCCHHHHHHHHHCCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCCCCHH TKLMHRLREFG HHHHHHHHHCC >Mature Secondary Structure STFSLKIIRVGITVLVVVLAVIAIFNVWAFYTESPWTRDAKFTADVVAIAPDVSGLLTE CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHEE VPVKDNQLVQKGQILFVIDQPRYQQALAEAEADVAYYQTLAAEKQREFSRRHLLGIQALS CCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QEEIDQASNVLQTVQHQLAKTIAVRNLARLDLERTTIRAPAEGWVTNLNVHAGEFINRGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEECCCCCCCEEEEEEEHHHHHHCCC TAVALVKKDTFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSA EEEEEEECCCEEEEEEEEHHHCCCCCCCCCEEEEECCCCCEEEECHHHHHCCCCCCCCCC DSKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQASPM CCCCCEEECCCHHHHHHHHHCCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCCCCHH TKLMHRLREFG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA