| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947574
Identifier: 153947574
GI number: 153947574
Start: 951254
End: 952009
Strand: Direct
Name: 153947574
Synonym: YpsIP31758_0791
Alternate gene names: NA
Gene position: 951254-952009 (Clockwise)
Preceding gene: 153949290
Following gene: 153947328
Centisome position: 20.14
GC content: 35.45
Gene sequence:
>756_bases ATGTCGTTCCCAGTACCTCCATATCCTTCAAAAAAAGATATCGAACTAAAGAGGACTCCTAAATCAGAAGTTAAGCCAAA AGTAGAAACGCAATCCAAACCAGAAGCTAAACCCAAACCAGCTGCCCAGAAGTCACAAAAACTTGCTACGGTAGGTGGAA AAAATAGTGGGAATGGGCAGGCACATATACCTTTACTCCAGAACGAAGCTCCTTGGATGGTAGTTGCAGTTAAAGAAGCT GAAAAATGGGGGGGGGTTGATGAGTCTGTCATAGGTGATAATTTCCATAAATTATTAAGTGCTAATACGAAAAGAACATT ATCTAATACGCCATGGTGCGCTTCATTTGTAAATTATTGTTTTTATTCAACTAATTATAAAACCTCACATAATTACGCAG GATCAAATTCTTTTGCAGATAAGGATGTGAATTTTAAAAAAATAAAAAAATCTGTTTTTGGCTGTTTAATGATTTGGCAA AAATCGGGTAATGGTCATGTTGCTTTTGTTTATGGGAAAGATAGTGTGACCGATCAAATTATTGTATTAGGTGGTAACCA GGATGATTCTATAAACTTCATGCTTGAATCTGACACAACAAAGAATTTTGTTGGCTACTATGTTCCTGCCATTTACAACC CAGACTTTGAAAAGAAGTTAGATGAGTATGATATTGTTGAGTTAAACAAAGAGTTTGGTATAACCTATGCCAGAAAATCC AAAGGTAAAGTTAAAAAACCAGTTAAGGATCGTTAA
Upstream 100 bases:
>100_bases AAATATTAATAAAATATACCCAGGTAAAGTGCTAATTATATATGGCAATGCTGATAAAGGTATTGACTTAAGCGAGCAAC AGCCTTGGGAAGAAAAGGGA
Downstream 100 bases:
>100_bases TGATATGAAATCATTCAAACTAATAATGTTTTTTTTTATTTTATTATCTAGTTTTTCTGGATATTCAGGTGAACGCGGAT ATTTTGTTTTTGTATGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSFPVPPYPSKKDIELKRTPKSEVKPKVETQSKPEAKPKPAAQKSQKLATVGGKNSGNGQAHIPLLQNEAPWMVVAVKEA EKWGGVDESVIGDNFHKLLSANTKRTLSNTPWCASFVNYCFYSTNYKTSHNYAGSNSFADKDVNFKKIKKSVFGCLMIWQ KSGNGHVAFVYGKDSVTDQIIVLGGNQDDSINFMLESDTTKNFVGYYVPAIYNPDFEKKLDEYDIVELNKEFGITYARKS KGKVKKPVKDR
Sequences:
>Translated_251_residues MSFPVPPYPSKKDIELKRTPKSEVKPKVETQSKPEAKPKPAAQKSQKLATVGGKNSGNGQAHIPLLQNEAPWMVVAVKEA EKWGGVDESVIGDNFHKLLSANTKRTLSNTPWCASFVNYCFYSTNYKTSHNYAGSNSFADKDVNFKKIKKSVFGCLMIWQ KSGNGHVAFVYGKDSVTDQIIVLGGNQDDSINFMLESDTTKNFVGYYVPAIYNPDFEKKLDEYDIVELNKEFGITYARKS KGKVKKPVKDR >Mature_250_residues SFPVPPYPSKKDIELKRTPKSEVKPKVETQSKPEAKPKPAAQKSQKLATVGGKNSGNGQAHIPLLQNEAPWMVVAVKEAE KWGGVDESVIGDNFHKLLSANTKRTLSNTPWCASFVNYCFYSTNYKTSHNYAGSNSFADKDVNFKKIKKSVFGCLMIWQK SGNGHVAFVYGKDSVTDQIIVLGGNQDDSINFMLESDTTKNFVGYYVPAIYNPDFEKKLDEYDIVELNKEFGITYARKSK GKVKKPVKDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28076; Mature: 27945
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPVPPYPSKKDIELKRTPKSEVKPKVETQSKPEAKPKPAAQKSQKLATVGGKNSGNGQ CCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCCCCCC AHIPLLQNEAPWMVVAVKEAEKWGGVDESVIGDNFHKLLSANTKRTLSNTPWCASFVNYC EEEEEECCCCCEEEEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHH FYSTNYKTSHNYAGSNSFADKDVNFKKIKKSVFGCLMIWQKSGNGHVAFVYGKDSVTDQI EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCCCEE IVLGGNQDDSINFMLESDTTKNFVGYYVPAIYNPDFEKKLDEYDIVELNKEFGITYARKS EEEECCCCCCEEEEEECCCCCCEEEEEECEEECCCHHHHCCCCCEEEECHHHCEEEEECC KGKVKKPVKDR CCCCCCCCCCC >Mature Secondary Structure SFPVPPYPSKKDIELKRTPKSEVKPKVETQSKPEAKPKPAAQKSQKLATVGGKNSGNGQ CCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCCCCCC AHIPLLQNEAPWMVVAVKEAEKWGGVDESVIGDNFHKLLSANTKRTLSNTPWCASFVNYC EEEEEECCCCCEEEEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHH FYSTNYKTSHNYAGSNSFADKDVNFKKIKKSVFGCLMIWQKSGNGHVAFVYGKDSVTDQI EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCCCEE IVLGGNQDDSINFMLESDTTKNFVGYYVPAIYNPDFEKKLDEYDIVELNKEFGITYARKS EEEECCCCCCEEEEEECCCCCCEEEEEECEEECCCHHHHCCCCCEEEECHHHCEEEEECC KGKVKKPVKDR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA