| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is yjjX [C]
Identifier: 153947531
GI number: 153947531
Start: 3926437
End: 3926979
Strand: Direct
Name: yjjX [C]
Synonym: YpsIP31758_3483
Alternate gene names: 153947531
Gene position: 3926437-3926979 (Clockwise)
Preceding gene: 153947403
Following gene: 153949527
Centisome position: 83.13
GC content: 49.36
Gene sequence:
>543_bases ATGTACCATGTTATCGCTGCAACTACCAATCCTGCGAAAATTAACGCTATTACCCTCGCCTTTGACGATGTTTACGGCCC TGGCCAATATCGCATTGAAGGTGTCAATGTCGACAGCGGTGTTCCCCTGCAACCCATAGGCAGCACTGAGACACGTATTG GTGCCCGTCAACGGGTTAAGAACGCGCGCCAGGTTCGCCCGAAGGCTGATTTTTGGGTTGGGATTGAAGCAGGCATTGAA GATAATATGACCTTTGCATGGATGGTAATTGAACACTTACAAGCACGGGGAGAATCCCGTTCTGCCAGTTTAATGCTGCC TGACATTATACTACAAGGGATCCGACAAGGACGTGAACTGGGCGACGAAATGGCGGTTTTAAGCGGTATTTCGAATGTAA AACAGCAAGGCGGCGCAATCGGGATTTTTACCCAAGGTAAATTAACTCGAACCAGTGTCTATCACCAGGCCCTCTTGTTG GCACTGGTGCCGTTCCACAATGAGATTTACCAACGCCCATCGCCCTCTAAACCAGCCATTTAG
Upstream 100 bases:
>100_bases CCGTTATACTGCGTAAAATAAGCACAAAACCTATCTGAGATAAAACCTATCTGAGATAAAACCTATTTTAGATAGGCTTT AAAGGATATTCATACTCATT
Downstream 100 bases:
>100_bases CGTTTGTTGGCTAGCAACTGGGCTTCGAGCCAGCTTTTCAGCTGTGGTGGGGCCGTTTTCAAGCTATTAGAGCCACGGGT GATCGTCGCAATACCTGCAC
Product: NTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVKNARQVRPKADFWVGIEAGIE DNMTFAWMVIEHLQARGESRSASLMLPDIILQGIRQGRELGDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLL ALVPFHNEIYQRPSPSKPAI
Sequences:
>Translated_180_residues MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVKNARQVRPKADFWVGIEAGIE DNMTFAWMVIEHLQARGESRSASLMLPDIILQGIRQGRELGDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLL ALVPFHNEIYQRPSPSKPAI >Mature_180_residues MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVKNARQVRPKADFWVGIEAGIE DNMTFAWMVIEHLQARGESRSASLMLPDIILQGIRQGRELGDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLL ALVPFHNEIYQRPSPSKPAI
Specific function: Unknown
COG id: COG1986
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0244 family [H]
Homologues:
Organism=Escherichia coli, GI87082442, Length=170, Percent_Identity=57.6470588235294, Blast_Score=208, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002786 [H]
Pfam domain/function: PF01931 DUF84 [H]
EC number: NA
Molecular weight: Translated: 19708; Mature: 19708
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVK CEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH NARQVRPKADFWVGIEAGIEDNMTFAWMVIEHLQARGESRSASLMLPDIILQGIRQGREL HHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHH GDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLLALVPFHNEIYQRPSPSKPAI HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVK CEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH NARQVRPKADFWVGIEAGIEDNMTFAWMVIEHLQARGESRSASLMLPDIILQGIRQGREL HHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHH GDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLLALVPFHNEIYQRPSPSKPAI HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA