| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153947451
Identifier: 153947451
GI number: 153947451
Start: 2294953
End: 2296071
Strand: Direct
Name: 153947451
Synonym: YpsIP31758_1993
Alternate gene names: NA
Gene position: 2294953-2296071 (Clockwise)
Preceding gene: 153950659
Following gene: 153948498
Centisome position: 48.59
GC content: 50.94
Gene sequence:
>1119_bases ATGAAATGGTATGATGGACTACGGCATCCGGGTGTATTGGCGGCATTGTCTGCTGCAATACTGTTTGGTGCCGGTACCCC TCTGGCAAAACAATTACTGAATACCGTTAGCCCCTGGTTATTGGCCGGTTTACTTTACCTTGGCTCGGGTATTGGCTTAA CACTCTACCGTTTGATCACTCGCCCGGCGGCGGTGAGCCTGCCCCGTAATGAATTATTGTGGTTTATTGGTGCCATCCTC TCCGGGGGGATCATCGCACCCGTGCTGCTAATGGTCGGCCTCACGGGTATGCCCGCCTCTGGCGCATCACTGTTACTCAA TGCTGAAGGGGTATTCACCGCCCTTTTAGCCTGGTTTGCCTTCAAAGAGAATGTTGACCGTCGTATTGCTCTGGGGATGG TGATTATCATCGCTGGCGCAGTTGTGCTTAGCTGGCCAGAAGAAGTACTTAACTGGTGGCCAAAAGAGGCTCAATTTGCC GGATTATGGCCGACGCTGGCCATTTTAGGTGCCTGCTTTGCCTGGGGAATTGATAACAATCTGACCCGTAAAGTCTCGCT GAACGATGCAACCTGGATTGCCGCCGTCAAAGGGGGCGTTGCCGGAGTGGTTAATCTGGCGCTGGCCTTCGCCCTCGGAG CAACATTGCCCCCTTTGGCAAATCTCGCTGGCGCATTGTTGGTTGGATTTTTGGCTTATGGTGTCAGTTTGGCGCTATTT GTCATTGGATTACGTCACCTCGGTACTGCCCGCACCGGTGCCTATTTTTCTATTGCTCCGTTCTTAGGCGCAGTGTTGGC TGTCGCCTTAGGTGACACTGTCACCATTCCGTTGCTCATCGCGGGTATTTTGATGGCGATAGGGATCGGGTTACATCTTA CGGAGCAGCATGAACATCAACATACCCATGATGAAATGATACATGAGCATGAACATATTCATGACGAACATCATCAACAT CGCCATGACTTTCCGGTAGACGCGGGTACCGCGCATAAGCATCGTCATCAGCACCTACCGATGGCACACTCTCATTCGCA TTTTCCTGATTCACACCATCAGCATAAACATCCTCGACATAAGCATAATCAACATAAGTATCATCAACATAAGCACTAG
Upstream 100 bases:
>100_bases ATCAGCCGGTTAATTTTTTCTTGTTCAGAAAGCATTTTCCGGCTTTTTCTATGGGCTAAAATTATCACTTCTCGCTATTT GTGGATCACGAGCTGAATTG
Downstream 100 bases:
>100_bases CGGTGCAAACGTTAGCGGTATAAACACCAAACTCTCACCGTTCATCCAATTGGCTGAAGCGCTGAACAAGATAATCCAAT ACGCTGCGTACCGAAGGTAG
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MKWYDGLRHPGVLAALSAAILFGAGTPLAKQLLNTVSPWLLAGLLYLGSGIGLTLYRLITRPAAVSLPRNELLWFIGAIL SGGIIAPVLLMVGLTGMPASGASLLLNAEGVFTALLAWFAFKENVDRRIALGMVIIIAGAVVLSWPEEVLNWWPKEAQFA GLWPTLAILGACFAWGIDNNLTRKVSLNDATWIAAVKGGVAGVVNLALAFALGATLPPLANLAGALLVGFLAYGVSLALF VIGLRHLGTARTGAYFSIAPFLGAVLAVALGDTVTIPLLIAGILMAIGIGLHLTEQHEHQHTHDEMIHEHEHIHDEHHQH RHDFPVDAGTAHKHRHQHLPMAHSHSHFPDSHHQHKHPRHKHNQHKYHQHKH
Sequences:
>Translated_372_residues MKWYDGLRHPGVLAALSAAILFGAGTPLAKQLLNTVSPWLLAGLLYLGSGIGLTLYRLITRPAAVSLPRNELLWFIGAIL SGGIIAPVLLMVGLTGMPASGASLLLNAEGVFTALLAWFAFKENVDRRIALGMVIIIAGAVVLSWPEEVLNWWPKEAQFA GLWPTLAILGACFAWGIDNNLTRKVSLNDATWIAAVKGGVAGVVNLALAFALGATLPPLANLAGALLVGFLAYGVSLALF VIGLRHLGTARTGAYFSIAPFLGAVLAVALGDTVTIPLLIAGILMAIGIGLHLTEQHEHQHTHDEMIHEHEHIHDEHHQH RHDFPVDAGTAHKHRHQHLPMAHSHSHFPDSHHQHKHPRHKHNQHKYHQHKH >Mature_372_residues MKWYDGLRHPGVLAALSAAILFGAGTPLAKQLLNTVSPWLLAGLLYLGSGIGLTLYRLITRPAAVSLPRNELLWFIGAIL SGGIIAPVLLMVGLTGMPASGASLLLNAEGVFTALLAWFAFKENVDRRIALGMVIIIAGAVVLSWPEEVLNWWPKEAQFA GLWPTLAILGACFAWGIDNNLTRKVSLNDATWIAAVKGGVAGVVNLALAFALGATLPPLANLAGALLVGFLAYGVSLALF VIGLRHLGTARTGAYFSIAPFLGAVLAVALGDTVTIPLLIAGILMAIGIGLHLTEQHEHQHTHDEMIHEHEHIHDEHHQH RHDFPVDAGTAHKHRHQHLPMAHSHSHFPDSHHQHKHPRHKHNQHKYHQHKH
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 40279; Mature: 40279
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWYDGLRHPGVLAALSAAILFGAGTPLAKQLLNTVSPWLLAGLLYLGSGIGLTLYRLIT CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RPAAVSLPRNELLWFIGAILSGGIIAPVLLMVGLTGMPASGASLLLNAEGVFTALLAWFA CCHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHH FKENVDRRIALGMVIIIAGAVVLSWPEEVLNWWPKEAQFAGLWPTLAILGACFAWGIDNN HHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC LTRKVSLNDATWIAAVKGGVAGVVNLALAFALGATLPPLANLAGALLVGFLAYGVSLALF CEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VIGLRHLGTARTGAYFSIAPFLGAVLAVALGDTVTIPLLIAGILMAIGIGLHLTEQHEHQ HHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCHHHHC HTHDEMIHEHEHIHDEHHQHRHDFPVDAGTAHKHRHQHLPMAHSHSHFPDSHHQHKHPRH CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC KHNQHKYHQHKH CCCCHHHHCCCC >Mature Secondary Structure MKWYDGLRHPGVLAALSAAILFGAGTPLAKQLLNTVSPWLLAGLLYLGSGIGLTLYRLIT CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RPAAVSLPRNELLWFIGAILSGGIIAPVLLMVGLTGMPASGASLLLNAEGVFTALLAWFA CCHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHH FKENVDRRIALGMVIIIAGAVVLSWPEEVLNWWPKEAQFAGLWPTLAILGACFAWGIDNN HHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC LTRKVSLNDATWIAAVKGGVAGVVNLALAFALGATLPPLANLAGALLVGFLAYGVSLALF CEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VIGLRHLGTARTGAYFSIAPFLGAVLAVALGDTVTIPLLIAGILMAIGIGLHLTEQHEHQ HHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCHHHHC HTHDEMIHEHEHIHDEHHQHRHDFPVDAGTAHKHRHQHLPMAHSHSHFPDSHHQHKHPRH CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC KHNQHKYHQHKH CCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]