| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yhjG [H]
Identifier: 153947448
GI number: 153947448
Start: 4571208
End: 4573445
Strand: Reverse
Name: yhjG [H]
Synonym: YpsIP31758_4058
Alternate gene names: 153947448
Gene position: 4573445-4571208 (Counterclockwise)
Preceding gene: 153949925
Following gene: 153950137
Centisome position: 96.83
GC content: 52.86
Gene sequence:
>2238_bases ATGACAAGAACCGGAAAAGTATTGGTGGGCGTCAGTGGGTTTATCCTGTTGTCATTGGTGGCGGCGGTGATATTTGTCGC CTCTTTTGACTGGAATCGCTTGAAGCCAACAATTAACCAAAAAGTCTCCGCCGAGTTGCAACGGCCTTTTGCCATTCGTG GCAATTTGAGTGTGGATTGGTCACGAGAAGGCGAAGGTCCTGGCTGGCGCGGTTGGATCCCCTGGCCGCATATCCATGCG GAAGATTTGGTCTTGGGTAACCCAACGACGTTAATCAGCACACAAGAGAGCCGTGACGCTCAATCAACACAAGGCACGCC GCTCTCCGACGCGTTTCCCACCGGAGAGGGAGAGATGGTGACGCTTAAGCGAATCGACGCCAGCATTGCTCCGCTGTCAT TATTGAACAAAGAAGTTCGTATCCCCCGCCTTTGGCTGACGCAGCCAGACATTCATTTGCAACGCCTGGCGAATGGCAAT AACAACTGGACGTTTAATCTGACCAATACCTCCACGGATAGCTCGTCTTGGTCAGTGGATATCGGCGATATTATTTTTGA TCGCGGTGAGATAACGCTGAAAGATGCCATCCTGCAAGCTGATTTACTCGCGGTGATTGATCCGCTGGCTAAAGCGTTGC CGTTCGCACAAGTGACCGGTGTCCGTCGCGGGGCCAGTATTAATTCGGTGACCAGCACACATTCGGCAAACACGACGACA TCATCGGTCACGACGACATCAGTGGTCACGACTACAGCAACGGCCACGACTAACCCTGTGACAGAGACAGAGACAGAGAC AGAGACAGAGACGGTAAAAAGCACGACTCCAGATTACCTCTTCGGCTGGAAAGTAGAAGGTCAGTATCAGGGGCAGCCCT TAGTGGGCAGTGGGAAAATAGGGGGCATGATATCGATGAATGACGCGAATGTGCCGTTCCCTCTGCAAGCGGATATGCGC TACGGTTCTACTCAGGTGGCCGTCGTCGGGACCTTAACCGATCCCGGAAATCTGGCGGGGCTGGATCTGCAATTGGTCTT ATCCGGGACCAGTCTGGATAACCTCTATCCATTGCTCGATGTCGTACTGCCTGCCACCCCGCCTTATCAGACCGAGGGTC ATCTGAGTGCTCGCCTAAAACAAGCAGGGGGCGCGGTTTATCATTATGAAAATTTTAATGGGAAGATTGGTGACAGTGAT ATTCACGGTGACCTGACGTATACCGACAGCCAGCCCCGGCCGAAATTAGCCGGTCAGGTCGATTCGGAAAAATTACGTTT TACCGATTTGGCTCCGCTGATCGGGGCCGATTCCAATCAGGAAAAAGCCCTACGAGGTGAACGGAATCGGCAGCCGGGCA ATAAGATCCTGCCGACAGAAACGTTTGATACCAAAAGTTGGGGAGTGATGGACGCGGATGTCACTTATACGGCTAAGCGT ATTGAACGGGATAAGTCATTACCGCTAAGTGATCTGTACACCCATGTCGTCTTAAAAGAGGGGACGTTACTGCTCGACCC GCTGCGGTTTGGGATGGCGGAAGGGGATCTGGCTGCAACTTTGCGCCTCGATAGTCACCAAACCCCGATGCATGGCAAGG TTGATTTGCATGTCCGGCGCATACAATTAAAAGCCTTGCTGCCACAGGTACAGGCGATGCGGAGCAGCCTGGGGCGCTTG AGTGGTGATGCCTCCTTTACCGCAGCAGGCAACTCGGTTGCTGGCCTGTTAGCAACCAGCAACGGTAACGTGCGCCTGCT ACTGAGCCAGGGGCAGATCAGCCGTAGCCTGATGGAGTTACTCGGCCTGAATGTGGGTAACTATCTGGTGGCGAAGCTGT TTGGTGATGATACGGTGAAAATTAACTGTGCGGCGGCAGATATTACGTTGCGTAATGGGGTGGCGACGCCGAACGTGTTT GTCTTCGATACTGAAAATGCCATTATCAATATTACCGGTAATGCTAATTTTGCTACCGAGCGGCTGAATTTATCCATCGA TCCTGAAAGCAAAGGGCTACGTATTCTGACCCTGCGCTCGCCACTGTATGTCAAAGGGACCTTTAAACGCCCCGATGTGG GGGTGAAAACCGGAGCGTTGATTGCCCGAGGTGCCGTTGCGGCAGCACTGGGGGTGGCATTAACGCCGGCAGCGGCATTA CTGGCACTGATCTCCCCCAGTGAAGGTGAAGAGAATCAGTGCGCACCGTTACTGCGAAAAATGCAGCAAAAGAAATAA
Upstream 100 bases:
>100_bases CTGTTTGCACAGGTCTTAATCGAGGATAGAGACCCAACACGCTACCCTTAGAGAGAATACGTAGATTCACAGCGACTGTA CGTAGAAGCATGGAGCTATT
Downstream 100 bases:
>100_bases TGTGTTATTGCACCGGGGGGTGAGGTAGCACCTGACAGGTGTGATCTTGCAGTTCCTCTGCTGAGGCGCGATCCTGCGTC ATCAGGTTCGCTTTGTCGGC
Product: AsmA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 745; Mature: 744
Protein sequence:
>745_residues MTRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGEGPGWRGWIPWPHIHA EDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMVTLKRIDASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGN NNWTFNLTNTSTDSSSWSVDIGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTT SSVTTTSVVTTTATATTNPVTETETETETETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDANVPFPLQADMR YGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSD IHGDLTYTDSQPRPKLAGQVDSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKR IERDKSLPLSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKALLPQVQAMRSSLGRL SGDASFTAAGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGDDTVKINCAAADITLRNGVATPNVF VFDTENAIINITGNANFATERLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAAL LALISPSEGEENQCAPLLRKMQQKK
Sequences:
>Translated_745_residues MTRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGEGPGWRGWIPWPHIHA EDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMVTLKRIDASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGN NNWTFNLTNTSTDSSSWSVDIGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTT SSVTTTSVVTTTATATTNPVTETETETETETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDANVPFPLQADMR YGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSD IHGDLTYTDSQPRPKLAGQVDSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKR IERDKSLPLSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKALLPQVQAMRSSLGRL SGDASFTAAGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGDDTVKINCAAADITLRNGVATPNVF VFDTENAIINITGNANFATERLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAAL LALISPSEGEENQCAPLLRKMQQKK >Mature_744_residues TRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGEGPGWRGWIPWPHIHAE DLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMVTLKRIDASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNN NWTFNLTNTSTDSSSWSVDIGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTTS SVTTTSVVTTTATATTNPVTETETETETETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDANVPFPLQADMRY GSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDI HGDLTYTDSQPRPKLAGQVDSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKRI ERDKSLPLSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKALLPQVQAMRSSLGRLS GDASFTAAGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGDDTVKINCAAADITLRNGVATPNVFV FDTENAIINITGNANFATERLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALL ALISPSEGEENQCAPLLRKMQQKK
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=755, Percent_Identity=49.4039735099338, Blast_Score=737, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 80157; Mature: 80026
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDW CCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEE SREGEGPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMV CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE TLKRIDASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVD EEEECCCCCCCHHHHCCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCEEEE IGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTT HHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCC SSVTTTSVVTTTATATTNPVTETETETETETVKSTTPDYLFGWKVEGQYQGQPLVGSGKI CCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCC GGMISMNDANVPFPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLD CCEEEECCCCCCCCEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHH VVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTYTDSQPRPKLAGQV HHCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCC DSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKR CCCCEEEEECCHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHH IERDKSLPLSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRR HHCCCCCCHHHHHHEEEEECCCEEECHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEE IQLKALLPQVQAMRSSLGRLSGDASFTAAGNSVAGLLATSNGNVRLLLSQGQISRSLMEL EEHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCHHHHHHHHH LGLNVGNYLVAKLFGDDTVKINCAAADITLRNGVATPNVFVFDTENAIINITGNANFATE HCCCCCCEEEEEEECCCEEEEEEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEE RLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAAL EEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LALISPSEGEENQCAPLLRKMQQKK HHEECCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDW CCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEE SREGEGPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMV CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE TLKRIDASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVD EEEECCCCCCCHHHHCCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCEEEE IGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTT HHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCC SSVTTTSVVTTTATATTNPVTETETETETETVKSTTPDYLFGWKVEGQYQGQPLVGSGKI CCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCC GGMISMNDANVPFPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLD CCEEEECCCCCCCCEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHH VVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTYTDSQPRPKLAGQV HHCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCC DSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKR CCCCEEEEECCHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHH IERDKSLPLSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRR HHCCCCCCHHHHHHEEEEECCCEEECHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEE IQLKALLPQVQAMRSSLGRLSGDASFTAAGNSVAGLLATSNGNVRLLLSQGQISRSLMEL EEHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCHHHHHHHHH LGLNVGNYLVAKLFGDDTVKINCAAADITLRNGVATPNVFVFDTENAIINITGNANFATE HCCCCCCEEEEEEECCCEEEEEEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEE RLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAAL EEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LALISPSEGEENQCAPLLRKMQQKK HHEECCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]