BacMap

Definition	Yersinia pseudotuberculosis IP 31758, complete genome.
Accession	NC_009708
Length	4,723,306

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The map label for this gene is gabD [H]

Identifier: 153947431

GI number: 153947431

Start: 3046599

End: 3048095

Strand: Reverse

Name: gabD [H]

Synonym: YpsIP31758_2692

Alternate gene names: 153947431

Gene position: 3048095-3046599 (Counterclockwise)

Preceding gene: 153950150

Following gene: 153949119

Centisome position: 64.53

GC content: 56.78

Gene sequence:

>1497_bases
ATGAGTGAATATCATGAAAAAAATAATGCACTCTTCAAGTCGATTACCGCGTTAGACGGCGCTTTATTTATCAATGGTGA
GTTCCGCAAAGGCGCGGGGGGGCGTCTGCCAGTGGAAAACCCGGCTACCGGCAAAGTGATCGGTCATCTCGCGGCGGCTA
CTCCAGAGGAGATCGAAGAGGCGGTTGCTGCGGCGCGTCGCGCTTTTCCTGCCTGGGCTGCCGAACGGCCAAAGGCCCGA
GCGAATGCGTTGCACCGATTGGGTGATTTGATCGCCGCCGATGCCCTGAATATGGCGCGGATCATGACCATCGAACAGGG
CAAGCCGGTTAACGAAGCACAAGGTGAAATACTGAAGCTCGCCGAAATTTGTCATTTTTATGGCGAAGAAGCGACTCGCG
TGCAAGGTGACGTTGTGCCGAATGACCCTCCAGGTTTTCAAAGTCTTGTCGTGCGAGAACCGGTTGGGGTGGTGGGGGCG
ATTACCCCTTGGAATTACCCGGCCGAACTGGTGGGATGGAAGCTGTGCGCCAGCCTTGCCGCAGGCTGTACCCTCATTAT
CAAACCTGCTGAACTGACACCCTACACGGCGCTGGCCATCGCTGAAAAATGCCTTGAAGCGGGTATTCCTGCCGGTGTCG
TCAATGTGTTGACGGGGAAGGGGGAACAGGTTGGGCAGGCGCTGGTTGAACATCCACAGGTCGATAAAATAGCCTTTACT
GGTTCCAGCGCGGTCGGTTTGCATATCCAGCAAAGTTGCCCGCAGGTTAAGCGGTTGTCGCTCGAACTCGGCGGCAATGG
TCCGATGGTGGTGGCCGCCTGCGCAGATGTGGCTGCCGCAGTTAAGGGCGCGGTGCGTCGTAGCTTCCGCAACTGTGGGC
AGGTCTGCATTGCGATCAATCGTATTTATGTCCACCGCTCATGCTATCGGGCGTTTGTGAGCAAAATGGGGGTGGCTACC
AATGGGTTGCGCCTTGGCAATGGGTTGGACGATCCAGCGGCGGACTTGGGTGCGATGGCCTCTGTAGAGCCACTGAACAA
AACGCGTGCGCACCTTGAGGATGCTCTGGCAAAGGGGGCGCGCTTGGTTGCGGGGGGGAAGGCGCCAGAGGGGGTGGAAT
ATGCCAAGGGCCATTTCTTCCGTCCGACTGTGCTGGCCGACTGCACACACCAAATGCGCGTCATGACCGAAGAGACGTTT
GGCCCGCTGGTCGGCTTAGCCCCTTTCGATGATATCGATGAAGTGATTAGTCGAGCGAATGATACTCCCTATGGGCTGGC
AGCTTACATTTATGCACGAGATCTGGCGGCTATCCACCGGCTGTCAGCGGCGTTGGACTACGGCAATGTGGCAATCAATA
ACGTCGATGCCAGCATGATGAATGCGCCCTATGGGGGGCGTAAGCAAAGTGGTGTGGGCTACGAGCATGGCCGTGAGGGG
TTGCTGGAGTATTTCAATTTCAAGCACATCCGCTTGTACCACGGTATCGGGGACTAA

Upstream 100 bases:

>100_bases
TGGGGGATCGCGTAAAACTAGATGAGTTATGATCCGCATCGGGCTAAACCACGGGCTAAACCACGGGCTCAACTGCAGAT
GAAGGCGACGGAGACGCAAC

Downstream 100 bases:

>100_bases
ACCATGCAGGCGCTTTTGGGCATTGATATCGGCACCTCGGGGTGTAAGGCGTTGCTGATCGGTATCGATGGTGCGGTGAT
CGCCGCCGATACCGCGAGTT

Product: succinate-semialdehyde dehydrogenase (NADP+)

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MSEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEEAVAAARRAFPAWAAERPKAR
ANALHRLGDLIAADALNMARIMTIEQGKPVNEAQGEILKLAEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGA
ITPWNYPAELVGWKLCASLAAGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFT
GSSAVGLHIQQSCPQVKRLSLELGGNGPMVVAACADVAAAVKGAVRRSFRNCGQVCIAINRIYVHRSCYRAFVSKMGVAT
NGLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGARLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETF
GPLVGLAPFDDIDEVISRANDTPYGLAAYIYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREG
LLEYFNFKHIRLYHGIGD

Sequences:

>Translated_498_residues
MSEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEEAVAAARRAFPAWAAERPKAR
ANALHRLGDLIAADALNMARIMTIEQGKPVNEAQGEILKLAEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGA
ITPWNYPAELVGWKLCASLAAGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFT
GSSAVGLHIQQSCPQVKRLSLELGGNGPMVVAACADVAAAVKGAVRRSFRNCGQVCIAINRIYVHRSCYRAFVSKMGVAT
NGLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGARLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETF
GPLVGLAPFDDIDEVISRANDTPYGLAAYIYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREG
LLEYFNFKHIRLYHGIGD
>Mature_497_residues
SEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEEAVAAARRAFPAWAAERPKARA
NALHRLGDLIAADALNMARIMTIEQGKPVNEAQGEILKLAEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGAI
TPWNYPAELVGWKLCASLAAGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFTG
SSAVGLHIQQSCPQVKRLSLELGGNGPMVVAACADVAAAVKGAVRRSFRNCGQVCIAINRIYVHRSCYRAFVSKMGVATN
GLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGARLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETFG
PLVGLAPFDDIDEVISRANDTPYGLAAYIYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREGL
LEYFNFKHIRLYHGIGD

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI12007648, Length=481, Percent_Identity=36.3825363825364, Blast_Score=311, Evalue=7e-85,
Organism=Homo sapiens, GI4507229, Length=491, Percent_Identity=38.9002036659878, Blast_Score=311, Evalue=1e-84,
Organism=Homo sapiens, GI25777721, Length=504, Percent_Identity=37.8968253968254, Blast_Score=302, Evalue=4e-82,
Organism=Homo sapiens, GI25777730, Length=478, Percent_Identity=36.6108786610879, Blast_Score=302, Evalue=5e-82,
Organism=Homo sapiens, GI25777724, Length=478, Percent_Identity=37.0292887029289, Blast_Score=294, Evalue=1e-79,
Organism=Homo sapiens, GI153266822, Length=485, Percent_Identity=36.9072164948454, Blast_Score=294, Evalue=1e-79,
Organism=Homo sapiens, GI21361176, Length=478, Percent_Identity=36.8200836820084, Blast_Score=291, Evalue=1e-78,
Organism=Homo sapiens, GI25777732, Length=478, Percent_Identity=36.6108786610879, Blast_Score=288, Evalue=1e-77,
Organism=Homo sapiens, GI21614513, Length=497, Percent_Identity=37.2233400402414, Blast_Score=287, Evalue=1e-77,
Organism=Homo sapiens, GI238814322, Length=483, Percent_Identity=34.9896480331263, Blast_Score=276, Evalue=3e-74,
Organism=Homo sapiens, GI115387104, Length=458, Percent_Identity=34.061135371179, Blast_Score=266, Evalue=4e-71,
Organism=Homo sapiens, GI25777728, Length=416, Percent_Identity=37.0192307692308, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI25952152, Length=481, Percent_Identity=33.6798336798337, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI25777726, Length=476, Percent_Identity=33.1932773109244, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI11095441, Length=474, Percent_Identity=27.2151898734177, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI301500698, Length=288, Percent_Identity=37.5, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI188035924, Length=473, Percent_Identity=26.8498942917548, Blast_Score=180, Evalue=4e-45,
Organism=Homo sapiens, GI310128103, Length=473, Percent_Identity=27.061310782241, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI310128093, Length=472, Percent_Identity=26.9067796610169, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI310128091, Length=472, Percent_Identity=26.4830508474576, Blast_Score=163, Evalue=4e-40,
Organism=Homo sapiens, GI223972651, Length=469, Percent_Identity=27.5053304904051, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI4557303, Length=342, Percent_Identity=29.5321637426901, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI73466520, Length=342, Percent_Identity=29.5321637426901, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI238859541, Length=455, Percent_Identity=26.1538461538462, Blast_Score=130, Evalue=4e-30,
Organism=Homo sapiens, GI25777736, Length=455, Percent_Identity=26.1538461538462, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI25777734, Length=455, Percent_Identity=26.1538461538462, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI206597441, Length=443, Percent_Identity=26.6365688487585, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI206597439, Length=443, Percent_Identity=26.6365688487585, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI22907049, Length=443, Percent_Identity=26.6365688487585, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI73695881, Length=348, Percent_Identity=28.448275862069, Blast_Score=123, Evalue=5e-28,
Organism=Homo sapiens, GI73695879, Length=348, Percent_Identity=28.448275862069, Blast_Score=123, Evalue=5e-28,
Organism=Homo sapiens, GI71773324, Length=349, Percent_Identity=28.080229226361, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI4502043, Length=349, Percent_Identity=28.080229226361, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI238814371, Length=349, Percent_Identity=28.080229226361, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI310128089, Length=333, Percent_Identity=27.027027027027, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI223972653, Length=470, Percent_Identity=25.9574468085106, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI310128087, Length=291, Percent_Identity=27.4914089347079, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI310128095, Length=316, Percent_Identity=27.2151898734177, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI310128097, Length=264, Percent_Identity=27.2727272727273, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI310128101, Length=242, Percent_Identity=27.2727272727273, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI310128099, Length=230, Percent_Identity=26.9565217391304, Blast_Score=93, Evalue=4e-19,
Organism=Escherichia coli, GI1789015, Length=470, Percent_Identity=43.4042553191489, Blast_Score=388, Evalue=1e-109,
Organism=Escherichia coli, GI1787715, Length=476, Percent_Identity=37.1848739495798, Blast_Score=305, Evalue=3e-84,
Organism=Escherichia coli, GI1787684, Length=473, Percent_Identity=34.2494714587738, Blast_Score=286, Evalue=2e-78,
Organism=Escherichia coli, GI87081896, Length=502, Percent_Identity=35.2589641434263, Blast_Score=283, Evalue=1e-77,
Organism=Escherichia coli, GI1786504, Length=475, Percent_Identity=35.1578947368421, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI1787558, Length=483, Percent_Identity=34.1614906832298, Blast_Score=265, Evalue=4e-72,
Organism=Escherichia coli, GI87081926, Length=455, Percent_Identity=32.967032967033, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI87082295, Length=473, Percent_Identity=32.76955602537, Blast_Score=218, Evalue=6e-58,
Organism=Escherichia coli, GI1788042, Length=454, Percent_Identity=30.8370044052863, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1787250, Length=460, Percent_Identity=28.695652173913, Blast_Score=165, Evalue=6e-42,
Organism=Escherichia coli, GI1787653, Length=326, Percent_Identity=26.3803680981595, Blast_Score=66, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI133930964, Length=483, Percent_Identity=37.6811594202899, Blast_Score=312, Evalue=2e-85,
Organism=Caenorhabditis elegans, GI17534119, Length=472, Percent_Identity=37.2881355932203, Blast_Score=294, Evalue=7e-80,
Organism=Caenorhabditis elegans, GI17562198, Length=494, Percent_Identity=35.0202429149798, Blast_Score=278, Evalue=4e-75,
Organism=Caenorhabditis elegans, GI25143874, Length=465, Percent_Identity=35.0537634408602, Blast_Score=270, Evalue=9e-73,
Organism=Caenorhabditis elegans, GI25144435, Length=478, Percent_Identity=35.3556485355649, Blast_Score=270, Evalue=9e-73,
Organism=Caenorhabditis elegans, GI25143876, Length=465, Percent_Identity=35.0537634408602, Blast_Score=270, Evalue=1e-72,
Organism=Caenorhabditis elegans, GI17551164, Length=476, Percent_Identity=33.6134453781513, Blast_Score=254, Evalue=7e-68,
Organism=Caenorhabditis elegans, GI71995606, Length=483, Percent_Identity=34.7826086956522, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI32564736, Length=416, Percent_Identity=35.8173076923077, Blast_Score=244, Evalue=7e-65,
Organism=Caenorhabditis elegans, GI71995613, Length=432, Percent_Identity=34.0277777777778, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI115534176, Length=456, Percent_Identity=28.2894736842105, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI71986308, Length=477, Percent_Identity=27.2536687631027, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17534447, Length=451, Percent_Identity=27.4944567627494, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17564084, Length=442, Percent_Identity=27.6018099547511, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI32564151, Length=414, Percent_Identity=27.7777777777778, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI25146394, Length=339, Percent_Identity=28.3185840707965, Blast_Score=124, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI25146391, Length=339, Percent_Identity=28.3185840707965, Blast_Score=124, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI32566756, Length=348, Percent_Identity=27.8735632183908, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI115532534, Length=339, Percent_Identity=27.7286135693215, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71990744, Length=292, Percent_Identity=27.0547945205479, Blast_Score=81, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6320917, Length=474, Percent_Identity=40.084388185654, Blast_Score=334, Evalue=2e-92,
Organism=Saccharomyces cerevisiae, GI6319478, Length=474, Percent_Identity=36.0759493670886, Blast_Score=306, Evalue=5e-84,
Organism=Saccharomyces cerevisiae, GI6324950, Length=474, Percent_Identity=35.6540084388186, Blast_Score=305, Evalue=8e-84,
Organism=Saccharomyces cerevisiae, GI6325196, Length=477, Percent_Identity=33.5429769392034, Blast_Score=278, Evalue=2e-75,
Organism=Saccharomyces cerevisiae, GI6323822, Length=487, Percent_Identity=34.4969199178645, Blast_Score=270, Evalue=5e-73,
Organism=Saccharomyces cerevisiae, GI6323821, Length=480, Percent_Identity=33.5416666666667, Blast_Score=263, Evalue=5e-71,
Organism=Saccharomyces cerevisiae, GI6321828, Length=474, Percent_Identity=29.3248945147679, Blast_Score=195, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6321826, Length=513, Percent_Identity=26.5107212475634, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6323757, Length=359, Percent_Identity=25.6267409470752, Blast_Score=104, Evalue=4e-23,
Organism=Drosophila melanogaster, GI281362580, Length=488, Percent_Identity=37.9098360655738, Blast_Score=338, Evalue=5e-93,
Organism=Drosophila melanogaster, GI62472918, Length=488, Percent_Identity=37.9098360655738, Blast_Score=338, Evalue=5e-93,
Organism=Drosophila melanogaster, GI62472926, Length=488, Percent_Identity=37.9098360655738, Blast_Score=338, Evalue=5e-93,
Organism=Drosophila melanogaster, GI62472936, Length=488, Percent_Identity=37.9098360655738, Blast_Score=338, Evalue=5e-93,
Organism=Drosophila melanogaster, GI21356737, Length=488, Percent_Identity=37.9098360655738, Blast_Score=338, Evalue=5e-93,
Organism=Drosophila melanogaster, GI24650465, Length=477, Percent_Identity=38.5744234800839, Blast_Score=313, Evalue=3e-85,
Organism=Drosophila melanogaster, GI24585660, Length=484, Percent_Identity=35.1239669421488, Blast_Score=295, Evalue=5e-80,
Organism=Drosophila melanogaster, GI20129399, Length=476, Percent_Identity=38.0252100840336, Blast_Score=295, Evalue=6e-80,
Organism=Drosophila melanogaster, GI24638876, Length=475, Percent_Identity=25.8947368421053, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24638878, Length=475, Percent_Identity=25.8947368421053, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24666674, Length=478, Percent_Identity=25.7322175732218, Blast_Score=165, Evalue=5e-41,
Organism=Drosophila melanogaster, GI24668425, Length=448, Percent_Identity=26.1160714285714, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24668417, Length=448, Percent_Identity=26.1160714285714, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24668413, Length=448, Percent_Identity=26.1160714285714, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI45552499, Length=450, Percent_Identity=24.6666666666667, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281360299, Length=449, Percent_Identity=25.3897550111359, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281360297, Length=449, Percent_Identity=25.3897550111359, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281360295, Length=449, Percent_Identity=25.3897550111359, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24586250, Length=449, Percent_Identity=25.3897550111359, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281360303, Length=450, Percent_Identity=24.8888888888889, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281360301, Length=449, Percent_Identity=25.6124721603563, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI28574525, Length=459, Percent_Identity=23.3115468409586, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI28571802, Length=455, Percent_Identity=22.4175824175824, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571800, Length=455, Percent_Identity=22.4175824175824, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571798, Length=460, Percent_Identity=22.6086956521739, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571796, Length=460, Percent_Identity=22.6086956521739, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571794, Length=460, Percent_Identity=22.6086956521739, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571806, Length=455, Percent_Identity=22.4175824175824, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI281360293, Length=162, Percent_Identity=32.0987654320988, Blast_Score=73, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52980; Mature: 52849

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEE
CCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHH
AVAAARRAFPAWAAERPKARANALHRLGDLIAADALNMARIMTIEQGKPVNEAQGEILKL
HHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHH
AEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGAITPWNYPAELVGWKLCASLA
HHHHHHHCCCHHEEECCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHH
AGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFT
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCCCCEEEEC
GSSAVGLHIQQSCPQVKRLSLELGGNGPMVVAACADVAAAVKGAVRRSFRNCGQVCIAIN
CCCCEEEEEHHHCCHHHEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIYVHRSCYRAFVSKMGVATNGLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGA
HHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC
RLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETFGPLVGLAPFDDIDEVISRAN
EEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHCC
DTPYGLAAYIYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHHHH
LLEYFNFKHIRLYHGIGD
HHHHHCCCEEEEECCCCC
>Mature Secondary Structure 
SEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEE
CCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHH
AVAAARRAFPAWAAERPKARANALHRLGDLIAADALNMARIMTIEQGKPVNEAQGEILKL
HHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHH
AEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGAITPWNYPAELVGWKLCASLA
HHHHHHHCCCHHEEECCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHH
AGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFT
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCCCCEEEEC
GSSAVGLHIQQSCPQVKRLSLELGGNGPMVVAACADVAAAVKGAVRRSFRNCGQVCIAIN
CCCCEEEEEHHHCCHHHEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIYVHRSCYRAFVSKMGVATNGLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGA
HHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC
RLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETFGPLVGLAPFDDIDEVISRAN
EEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHCC
DTPYGLAAYIYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHHHH
LLEYFNFKHIRLYHGIGD
HHHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]