| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947427
Identifier: 153947427
GI number: 153947427
Start: 1114557
End: 1116044
Strand: Reverse
Name: 153947427
Synonym: YpsIP31758_0930
Alternate gene names: NA
Gene position: 1116044-1114557 (Counterclockwise)
Preceding gene: 153946814
Following gene: 153950803
Centisome position: 23.63
GC content: 50.0
Gene sequence:
>1488_bases ATGAGTGTTGATATTAGCGCCAAACCCCGTCCGATCATTCCTTATGAACATCCTAATGCGGCGATGTATTACCAGTTGTT TAAACAACATATGATCCGCCAGTGGCATAAAAAACGGCCTTATGCGAGACATGATGCGCGCTTACAAGCCCTGTTTCAGA ATCAAAAGGTGTCGCTGCAAAGCCAGTGTGATTACCTGGTGCGTTATGTGGCTGAAGCATTTGATCATTATGCCGTCTGG GATTATACCCATGCTTATTATCCGGGGCGCCCCAGCCAGCAAAATGCGCGCACGGATGCACTGGAAGGCGTAAGCCGTGT CCTGCCGACGCTAGCGGCCTGGTTACACAGCCAACCTACGGGGCTGGATAATACGCGACTTGCTGATCTGAAAGGCGGGG AGCTCGACATTGTGGCTATCTTACGTCGCGCGTTCTTAGCCGGGACTGACCCGACCCATCGTGGATATTGGGGCACGCTG CATGATTATGATCAGCGTATTTGTGAAAGTGCAGACTTGGCATTGGCTTTATGGTTGAGCCGTGAGTCGGTCTGGCAGGC GTTTACGCCACCAGAACAGCAACAAGTGACACGCTGGTTCAGCCAGGTTAATACGCTGCAAACGGTGGATAATAACTGGC ATCTCTTCCCGTTAACGGTTCAGTTTGTGATGCGATCACTGAACGGCACTGGCGATATCAGTGATGATAAATACCAGCGC ATCAAAGAGTTCCATGTCGGTGAGGGCTGGTTTCGCGACGGAGCACAGGGCAATTATGATTACTATAACGCTTGGGGATT CCACTACTCTCTCTATTGGCTCGATCAAATAAATCCGGATTATGACCGACAGTTTATTCGTTCCTGCATGGCAGAATTCG TCGCCGCTTATCGCTATCTGATCACCCCACAAGGGATCCCCTTCTTTGGCCGTAGTGCCTGTTATCGCCTGGCGGTATCA GCGCCGTTACTGGCGGTGGCCAGTCACTCAACAGACCCCGTTCATACCGGTGAAGCCAAAAGAGCATTAGAAGCCACACT GCGTTATTTCATTGGTCACGGAGCCATGCGCTTCGGTGCTCCCACACAGGGATTATTCGCAGATGATGAAAGGCTGGTGG ACAACTACAGTGGGCCAGCTAGCAGTTTTTGGTCACTGCGGGCGTTGAATATTGCGCTGTATTGCGCCAATGACTGTGGG TTATGGCAGTGTGAAAGTAGCAAATTACCTGTCGAGACCGAGGATTTTAGTTTCACTATTAATGCCATCGATCTCTTTGT TATGGGAACTTTCGAAACGAAAGAGGTGGTTGTTACTTTTCGTCATGATTACACCAAAGAGCAGACACCACTGACCCGTC GTTTAGTGTCACAACCGTGGTTAGAGCGTGTGAAAGAGAACGTTACTGGCCGTGCTGAACGGCCGAAAAACAATTTACTC CGCAAAGGCGTAACCAGCTACAGCTCAAAAATGACGTCACTCTTTTAA
Upstream 100 bases:
>100_bases ATAAGGTGGAGCGAGTGTTCTTAGCCCCCTCTTTTATCCCCTCTTACCCCTCTTTTTATTACCGTTCTCCTTATCCTAGT GACTTGCAGGAACACTGCTC
Downstream 100 bases:
>100_bases CTGCGTTTACTTTCGATGTAATGCAAATCTCTTTTATTTGATTTCTTTTTGTTTGTGTAAGCTTTTTTTTATGGTTAAAT GAAAGGAAATGAAATCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MSVDISAKPRPIIPYEHPNAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQSQCDYLVRYVAEAFDHYAVW DYTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPTGLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTL HDYDQRICESADLALALWLSRESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQR IKEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYLITPQGIPFFGRSACYRLAVS APLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGAPTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCG LWQCESSKLPVETEDFSFTINAIDLFVMGTFETKEVVVTFRHDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLL RKGVTSYSSKMTSLF
Sequences:
>Translated_495_residues MSVDISAKPRPIIPYEHPNAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQSQCDYLVRYVAEAFDHYAVW DYTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPTGLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTL HDYDQRICESADLALALWLSRESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQR IKEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYLITPQGIPFFGRSACYRLAVS APLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGAPTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCG LWQCESSKLPVETEDFSFTINAIDLFVMGTFETKEVVVTFRHDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLL RKGVTSYSSKMTSLF >Mature_494_residues SVDISAKPRPIIPYEHPNAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQSQCDYLVRYVAEAFDHYAVWD YTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPTGLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTLH DYDQRICESADLALALWLSRESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQRI KEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYLITPQGIPFFGRSACYRLAVSA PLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGAPTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCGL WQCESSKLPVETEDFSFTINAIDLFVMGTFETKEVVVTFRHDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLLR KGVTSYSSKMTSLF
Specific function: Unknown
COG id: COG4289
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57020; Mature: 56889
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDISAKPRPIIPYEHPNAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHH SQCDYLVRYVAEAFDHYAVWDYTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPT HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTLHDYDQRICESADLALALWLS CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECC RESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQR HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHH IKEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYL HHHHHCCCCHHCCCCCCCCCCEEECEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH ITPQGIPFFGRSACYRLAVSAPLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGA CCCCCCCCCCHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC PTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCGLWQCESSKLPVETEDFSFTI CCCCCCCCCHHHHHCCCCCHHHHHHHEEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEE NAIDLFVMGTFETKEVVVTFRHDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLL EEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RKGVTSYSSKMTSLF HHHHHHHHHHHHHCC >Mature Secondary Structure SVDISAKPRPIIPYEHPNAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQ CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHH SQCDYLVRYVAEAFDHYAVWDYTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPT HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTLHDYDQRICESADLALALWLS CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECC RESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQR HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHH IKEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYL HHHHHCCCCHHCCCCCCCCCCEEECEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH ITPQGIPFFGRSACYRLAVSAPLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGA CCCCCCCCCCHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC PTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCGLWQCESSKLPVETEDFSFTI CCCCCCCCCHHHHHCCCCCHHHHHHHEEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEE NAIDLFVMGTFETKEVVVTFRHDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLL EEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RKGVTSYSSKMTSLF HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA