| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947418
Identifier: 153947418
GI number: 153947418
Start: 1616706
End: 1617548
Strand: Direct
Name: 153947418
Synonym: YpsIP31758_1376
Alternate gene names: NA
Gene position: 1616706-1617548 (Clockwise)
Preceding gene: 153946845
Following gene: 153950268
Centisome position: 34.23
GC content: 43.18
Gene sequence:
>843_bases ATGCTACTGGTATTAACTTCACCCAATACTACGCAACAGTATCGGCTCGATAAATCCGTTACTGCGGCCAATGCTGTCTG TTTTAACCTAGAGAAAGGGGTATTTTCTCCCCATCCTGTGGGGAATGGACATAATGAGGTGCAGTTTTACTGGCATTTTC ATGAACCATTGATTGTTAATCACAGCAGCAATTTTATTTGCCAGGTCAATGGCAAGCAATTGAATGTGGGTGAACACCAT TCTTTGTCTTTTGGTACAGAGATCCAGTTCGGGCACGTTAGCATCACGGCGGAAAGAGCGACAGCACAGCAGGTAGAGGA TAATTTTGCTGATAACCTGTTTATGCTGACTGGCTCTGAGGAACCAGGTAAAACTGACCTACCGGAAATTGAAGATATCT TGTCTCATGGCGGTCACTACATCTCTTATTTCGATGCAGTAGATGAGACGCAGTCATATGATCAGCAGGAGCCGGATATC CTCAAACGGTTGGAAGTGGAGTACAAGCGCTTTCTCTTGTGGGGAGAACAAAGCCGAGAATTTTTAGAAAAAGATGGACA GCAGGTGACAAAATTATCTGCCCGTGATGAATATTTGGACAATATCAGGGAACGAGTCAAAGACAAAACCCTGACCGAGT GTATTTTAGATTCCGGTGGGCTAATTGACAAAGTGACCAAAGAGTTGAGTGCTATTAATTACCTCGATACGCCGGATTAT GATGAAAAAATCGATTTATTAAAAGCATTGGCCCCAGAACACTTTATAACAAAAGAAAAAAACAGTGTGCCTTCGCTCAT GTTTCAGGAGCTCTACAAGCTAGGGCTGGACAGCCATCTATAA
Upstream 100 bases:
>100_bases TTATCAATAATTGTCCCGCGACGCGTTGTAGTGATAAGACGGGGTGTGGCTCGGTTATTGTCACTGGGTCGCCCAATGTA TTTATAGGTAACTAATGCCA
Downstream 100 bases:
>100_bases ATACGGATAAAACAAGATAATGAATACCACGAATTTAACTGAGTTATTAAAAAGCGCGTCTTTAACCGAAATGCTGGCCG ATGTCATTGCTACGATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MLLVLTSPNTTQQYRLDKSVTAANAVCFNLEKGVFSPHPVGNGHNEVQFYWHFHEPLIVNHSSNFICQVNGKQLNVGEHH SLSFGTEIQFGHVSITAERATAQQVEDNFADNLFMLTGSEEPGKTDLPEIEDILSHGGHYISYFDAVDETQSYDQQEPDI LKRLEVEYKRFLLWGEQSREFLEKDGQQVTKLSARDEYLDNIRERVKDKTLTECILDSGGLIDKVTKELSAINYLDTPDY DEKIDLLKALAPEHFITKEKNSVPSLMFQELYKLGLDSHL
Sequences:
>Translated_280_residues MLLVLTSPNTTQQYRLDKSVTAANAVCFNLEKGVFSPHPVGNGHNEVQFYWHFHEPLIVNHSSNFICQVNGKQLNVGEHH SLSFGTEIQFGHVSITAERATAQQVEDNFADNLFMLTGSEEPGKTDLPEIEDILSHGGHYISYFDAVDETQSYDQQEPDI LKRLEVEYKRFLLWGEQSREFLEKDGQQVTKLSARDEYLDNIRERVKDKTLTECILDSGGLIDKVTKELSAINYLDTPDY DEKIDLLKALAPEHFITKEKNSVPSLMFQELYKLGLDSHL >Mature_280_residues MLLVLTSPNTTQQYRLDKSVTAANAVCFNLEKGVFSPHPVGNGHNEVQFYWHFHEPLIVNHSSNFICQVNGKQLNVGEHH SLSFGTEIQFGHVSITAERATAQQVEDNFADNLFMLTGSEEPGKTDLPEIEDILSHGGHYISYFDAVDETQSYDQQEPDI LKRLEVEYKRFLLWGEQSREFLEKDGQQVTKLSARDEYLDNIRERVKDKTLTECILDSGGLIDKVTKELSAINYLDTPDY DEKIDLLKALAPEHFITKEKNSVPSLMFQELYKLGLDSHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31938; Mature: 31938
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVLTSPNTTQQYRLDKSVTAANAVCFNLEKGVFSPHPVGNGHNEVQFYWHFHEPLIVN CEEEEECCCCCHHEECCCHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEE HSSNFICQVNGKQLNVGEHHSLSFGTEIQFGHVSITAERATAQQVEDNFADNLFMLTGSE CCCCEEEEECCCEECCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHCCCEEEEECCC EPGKTDLPEIEDILSHGGHYISYFDAVDETQSYDQQEPDILKRLEVEYKRFLLWGEQSRE CCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECHHHHH FLEKDGQQVTKLSARDEYLDNIRERVKDKTLTECILDSGGLIDKVTKELSAINYLDTPDY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC DEKIDLLKALAPEHFITKEKNSVPSLMFQELYKLGLDSHL HHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLLVLTSPNTTQQYRLDKSVTAANAVCFNLEKGVFSPHPVGNGHNEVQFYWHFHEPLIVN CEEEEECCCCCHHEECCCHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEE HSSNFICQVNGKQLNVGEHHSLSFGTEIQFGHVSITAERATAQQVEDNFADNLFMLTGSE CCCCEEEEECCCEECCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHCCCEEEEECCC EPGKTDLPEIEDILSHGGHYISYFDAVDETQSYDQQEPDILKRLEVEYKRFLLWGEQSRE CCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECHHHHH FLEKDGQQVTKLSARDEYLDNIRERVKDKTLTECILDSGGLIDKVTKELSAINYLDTPDY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC DEKIDLLKALAPEHFITKEKNSVPSLMFQELYKLGLDSHL HHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA