Click here to switch to the map view.

The map label for this gene is yjjP [H]

Identifier: 153947364

GI number: 153947364

Start: 3887750

End: 3888550

Strand: Reverse

Name: yjjP [H]

Synonym: YpsIP31758_3451

Alternate gene names: 153947364

Gene position: 3888550-3887750 (Counterclockwise)

Preceding gene: 153947267

Following gene: 229294896

Centisome position: 82.33

GC content: 50.06

Gene sequence:

>801_bases
ATGAGCCTGGAGAATGTAATAAACAGTGATGTGCCGCATCATCAGCAGCGAGATATTACTCGGTTATGTATCAAATGTGC
CCTATTGCTGTTGCAACATGGCGCAGAAAGTATGCTGGTTGAGCAGTTATCGGCGCGTCTTGGTATTGCTCTGGGTATGG
ATAGCGTTGAAAGTTCTATCTCGGCCAATGCGGTGGTGTTAACCACCATTAGCCAGGGAAATTGCCTGACATCAACCCGT
AAGAATACGGATCGTGGCATTAATATGCAGGTAGTCACTGAGGTCCAGCATATTGTGATCCTCGCAGAGCACCGTTTGCT
GGATGCGAAAGACGTAGAAAAACGCTTTGAAAATATTAAACCTCTGCGTTACCCGCGCTGGCTGGTGGTTATCATGGTGG
CGCTCTCCTGCGGTTGTTTCAGTAAATTGAACGGCGGCGGTTGGGATGCCTTCTCTATCAGCTTTGTGGCCAGTGGGCTG
GCGATGTTTGTACGCCAAAGCCTGACGGCCCGCCATATGAATCCATTAATTAATTTCTGTATTACCGCTTTTGTGGCGAC
ATCTGCCTCCGGTTTATTAATGCGTTTACCATTTTTCGAGCAGGCTTCCAGTGTGGCGACGGCGGCCAGTGTATTGTTAT
TGGTTCCGGGTTTCCCGCTGATTAATGCGGTGGCAGATATGTTTAAAGGGCATGTTAATACGGGGCTGGCGCGTTGGGCG
ATGGCCAGCTTGCTGACCTTATCAACCTGTATTGGAGTGGTGTTCGCGATGGCACTTTGGGGTTTGCGGGGGTGGGCGTG
A

Upstream 100 bases:

>100_bases
GCGGTTCAAATAGGTTCCCAACGATTTGCCATTTGTTTACTGTAATGCCAATAACGTTGGATCTCTCTTCTACTCTTTTG
ACGGATAGTGATGCACGAAT

Downstream 100 bases:

>100_bases
GTTTACTGTGGGCATTACTACAGGACATGGTGTTAGCTGCGATCCCGGCGTTGGGCTTTGCCATGGTATTCAATGTACCG
GTCCGTGCACTGCGTTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSLENVINSDVPHHQQRDITRLCIKCALLLLQHGAESMLVEQLSARLGIALGMDSVESSISANAVVLTTISQGNCLTSTR
KNTDRGINMQVVTEVQHIVILAEHRLLDAKDVEKRFENIKPLRYPRWLVVIMVALSCGCFSKLNGGGWDAFSISFVASGL
AMFVRQSLTARHMNPLINFCITAFVATSASGLLMRLPFFEQASSVATAASVLLLVPGFPLINAVADMFKGHVNTGLARWA
MASLLTLSTCIGVVFAMALWGLRGWA

Sequences:

>Translated_266_residues
MSLENVINSDVPHHQQRDITRLCIKCALLLLQHGAESMLVEQLSARLGIALGMDSVESSISANAVVLTTISQGNCLTSTR
KNTDRGINMQVVTEVQHIVILAEHRLLDAKDVEKRFENIKPLRYPRWLVVIMVALSCGCFSKLNGGGWDAFSISFVASGL
AMFVRQSLTARHMNPLINFCITAFVATSASGLLMRLPFFEQASSVATAASVLLLVPGFPLINAVADMFKGHVNTGLARWA
MASLLTLSTCIGVVFAMALWGLRGWA
>Mature_265_residues
SLENVINSDVPHHQQRDITRLCIKCALLLLQHGAESMLVEQLSARLGIALGMDSVESSISANAVVLTTISQGNCLTSTRK
NTDRGINMQVVTEVQHIVILAEHRLLDAKDVEKRFENIKPLRYPRWLVVIMVALSCGCFSKLNGGGWDAFSISFVASGLA
MFVRQSLTARHMNPLINFCITAFVATSASGLLMRLPFFEQASSVATAASVLLLVPGFPLINAVADMFKGHVNTGLARWAM
ASLLTLSTCIGVVFAMALWGLRGWA

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0108 [H]

Homologues:

Organism=Escherichia coli, GI87082435, Length=251, Percent_Identity=73.7051792828685, Blast_Score=393, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 28901; Mature: 28770

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLENVINSDVPHHQQRDITRLCIKCALLLLQHGAESMLVEQLSARLGIALGMDSVESSI
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHH
SANAVVLTTISQGNCLTSTRKNTDRGINMQVVTEVQHIVILAEHRLLDAKDVEKRFENIK
CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PLRYPRWLVVIMVALSCGCFSKLNGGGWDAFSISFVASGLAMFVRQSLTARHMNPLINFC
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITAFVATSASGLLMRLPFFEQASSVATAASVLLLVPGFPLINAVADMFKGHVNTGLARWA
HHHHHHHCCCCHHEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
MASLLTLSTCIGVVFAMALWGLRGWA
HHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLENVINSDVPHHQQRDITRLCIKCALLLLQHGAESMLVEQLSARLGIALGMDSVESSI
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHH
SANAVVLTTISQGNCLTSTRKNTDRGINMQVVTEVQHIVILAEHRLLDAKDVEKRFENIK
CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PLRYPRWLVVIMVALSCGCFSKLNGGGWDAFSISFVASGLAMFVRQSLTARHMNPLINFC
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITAFVATSASGLLMRLPFFEQASSVATAASVLLLVPGFPLINAVADMFKGHVNTGLARWA
HHHHHHHCCCCHHEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
MASLLTLSTCIGVVFAMALWGLRGWA
HHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]