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The map label for this gene is yggT [H]

Identifier: 153947310

GI number: 153947310

Start: 1006718

End: 1007272

Strand: Reverse

Name: yggT [H]

Synonym: YpsIP31758_0828

Alternate gene names: 153947310

Gene position: 1007272-1006718 (Counterclockwise)

Preceding gene: 153946910

Following gene: 153948675

Centisome position: 21.33

GC content: 47.21

Gene sequence:

>555_bases
ATGCTAACGCTGACTTTTCTGGCAAAAACGGTCATTGACCTATATGTGATGGTACTGTTGTTGCGCATCTGGATGCAGTG
GGTTCACAGTGATTTCTATAATCCATTGTCTCAATTTGTGGTGAAAATAACCCAACCTATTGTTGGCCCACTGCGCCGAG
TGGTCCCCTCTCTGGGGCCAATCGATAGCGCATCATTGCTGTTGGCATATTTACTGGTGGCCATTAAGTACCCACTCCTC
TCACTGATTGGTCAAGGCTTCTTGTCACTCAGCATTGATCACCTCTTTTTCGGCCTTATTGGGCTGGTAAAAGCAGTGGG
TCACCTGATTTTCTGGGTCATGATTATCCGTGCACTGATGAGTTGGATCAGTCAGGGCCGTAGCCCGGTAGACTACCTGC
TGTTGCAGTTAACTGAACCATTAATGGCACCGATTCGTCGTATTTTACCTGCGATGGGGGGGATCGATTTCTCGGCAATG
GTTGTCATTTTTATCTTGTACCTGCTCAATTCTTTAGCCATGGAAACATTTGGGGCTATGTGGCTTTCGCTGTGA

Upstream 100 bases:

>100_bases
CCAGAGGCAATGCCCATGAATGGGCTGAGTAACCAGAACAACCAACACACCTGCACGTTGCAAGATGACGGGCATACAAT
ATTAAGGACTAAGGCAACTC

Downstream 100 bases:

>100_bases
GTGCAGTCCTCTCCACCGAAAACGGGCTGATACTCAAGCTCTATATTCAGCCCAAAGCCAGTCGAGATCAGATAGTCGGT
TTACATGGCGACGAACTTAA

Product: YggT family membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLTLTFLAKTVIDLYVMVLLLRIWMQWVHSDFYNPLSQFVVKITQPIVGPLRRVVPSLGPIDSASLLLAYLLVAIKYPLL
SLIGQGFLSLSIDHLFFGLIGLVKAVGHLIFWVMIIRALMSWISQGRSPVDYLLLQLTEPLMAPIRRILPAMGGIDFSAM
VVIFILYLLNSLAMETFGAMWLSL

Sequences:

>Translated_184_residues
MLTLTFLAKTVIDLYVMVLLLRIWMQWVHSDFYNPLSQFVVKITQPIVGPLRRVVPSLGPIDSASLLLAYLLVAIKYPLL
SLIGQGFLSLSIDHLFFGLIGLVKAVGHLIFWVMIIRALMSWISQGRSPVDYLLLQLTEPLMAPIRRILPAMGGIDFSAM
VVIFILYLLNSLAMETFGAMWLSL
>Mature_184_residues
MLTLTFLAKTVIDLYVMVLLLRIWMQWVHSDFYNPLSQFVVKITQPIVGPLRRVVPSLGPIDSASLLLAYLLVAIKYPLL
SLIGQGFLSLSIDHLFFGLIGLVKAVGHLIFWVMIIRALMSWISQGRSPVDYLLLQLTEPLMAPIRRILPAMGGIDFSAM
VVIFILYLLNSLAMETFGAMWLSL

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family [H]

Homologues:

Organism=Escherichia coli, GI1789322, Length=179, Percent_Identity=59.7765363128492, Blast_Score=211, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003425 [H]

Pfam domain/function: PF02325 YGGT [H]

EC number: NA

Molecular weight: Translated: 20692; Mature: 20692

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLTFLAKTVIDLYVMVLLLRIWMQWVHSDFYNPLSQFVVKITQPIVGPLRRVVPSLGP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IDSASLLLAYLLVAIKYPLLSLIGQGFLSLSIDHLFFGLIGLVKAVGHLIFWVMIIRALM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWISQGRSPVDYLLLQLTEPLMAPIRRILPAMGGIDFSAMVVIFILYLLNSLAMETFGAM
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WLSL
HHCC
>Mature Secondary Structure
MLTLTFLAKTVIDLYVMVLLLRIWMQWVHSDFYNPLSQFVVKITQPIVGPLRRVVPSLGP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IDSASLLLAYLLVAIKYPLLSLIGQGFLSLSIDHLFFGLIGLVKAVGHLIFWVMIIRALM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWISQGRSPVDYLLLQLTEPLMAPIRRILPAMGGIDFSAMVVIFILYLLNSLAMETFGAM
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WLSL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]