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The map label for this gene is 153947284

Identifier: 153947284

GI number: 153947284

Start: 1119452

End: 1120510

Strand: Reverse

Name: 153947284

Synonym: YpsIP31758_0933

Alternate gene names: NA

Gene position: 1120510-1119452 (Counterclockwise)

Preceding gene: 153948238

Following gene: 153949318

Centisome position: 23.72

GC content: 54.11

Gene sequence:

>1059_bases
ATGAGCAATATGACACAGCAGACGCGTACTCAACAGGCGCGTGAAACAATGAAGCGGGTATATCGCTATCAGGCAGCAAA
CCAAACACGTAGTGTGATCCGTCGGAGTGGCAAGACGCGTTTTATTAAAGACACAGACTGGGAGCGTGGTGTGTTCTGGT
CATGCGTTGCCGCCGCTTGGCTGGCAACCGATGACGCCGAGTATCTGGAGGGCGTCATGAATTACACGCTGCATACCGGG
TTCCGCCCTGGACCCAATCTGCGCTTTGCCGATGACCTGATTTGCTGTCAGGCCTATCTGGATGTCTGGCCGCAGATAGC
CGTACCGGAAGCATTAGAGCCAACCATCAAAGCCGTCTCTGCCATGGTGGACGAACCAAAGCCGGGGCGTGAAGATTGGT
GGTGGTGTGACTCATTGTTTATGGCCCCCGCCACCTTTGCAGCATTGAGCCAACGTACCGGTGACGCCCGTTATCTGGCT
TATATGGACACCGCATTCTGGGATGCAGTTGATTATCTGCGCGACCCTGACAGCGGTTTGTTCTACCGCGATCATCGCTA
TATTCCTGACGGTAACGGCACTGAGCTGCGTGAAGAAAATGGCGAGAAAGTGTTCTGGAGCCGGGGTATTGGCTGGGTAC
TGGCTGCCATCCCACGCCTGCTCGCGCGGATGCCAGAAGATTATACCGGTCGTCAGCGTTATCTCGATCTGTTTACTGAT
CTGGCAGATAACGTGATCCGTTACCAGCAAGCGGATGGTTTATGGCGTACCAGTCTGCTCGATCCTCAGCGGTTTCCTGC
CCCAGAGAGCAGTGCAACAGCGCTGTTTTGTTACGGGCTGAGCTGGGGAATTAACCAAGGTATTCTGGCACCAGAAACCT
ATCTGCCTGTGGTGGAAAAAGCCTGGGATGCCCTGCAAGGCTGTATCCACGATAACGGCATGATGGGTTGGGTTCAGCTA
CCGGCCTTTAATCCGCGTGATGTGAAATTTGAGCACAACATGGATTATGGCGCGGGGGCTTATTTATTGGCCGCGTCGGA
AATGTTACGTCTGGCCTAA

Upstream 100 bases:

>100_bases
CCCGGCGATTTTCCTTTCGTCCTCTGCCAGCGACTATGTGACCGGGTATACATTAGCAGTGGATGGCGGCTGGCTGGCGC
GTTAAGTAAGGGAGCATCAC

Downstream 100 bases:

>100_bases
CAAGGTTGTTCTGTTTGCCCGTTCGCGGGGGAACTCAGTAGCCGTGATGTGTTATTCATTTTGTTGCACTGGCGCACATC
ACCTGATGTGCGTGAGGTTA

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: Glycosy Hydrolase Family Protein; Glycosyl Hydrolase; Family; Polysaccharide Lyase Family Protein; Glycosyl Hydrolase RhiN; Rhamnogalacturonides Degradation Protein RhiN; Glycoside Hydrolase Family; Gycosyl Hydrolase; Plant-Inducible Protein

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSNMTQQTRTQQARETMKRVYRYQAANQTRSVIRRSGKTRFIKDTDWERGVFWSCVAAAWLATDDAEYLEGVMNYTLHTG
FRPGPNLRFADDLICCQAYLDVWPQIAVPEALEPTIKAVSAMVDEPKPGREDWWWCDSLFMAPATFAALSQRTGDARYLA
YMDTAFWDAVDYLRDPDSGLFYRDHRYIPDGNGTELREENGEKVFWSRGIGWVLAAIPRLLARMPEDYTGRQRYLDLFTD
LADNVIRYQQADGLWRTSLLDPQRFPAPESSATALFCYGLSWGINQGILAPETYLPVVEKAWDALQGCIHDNGMMGWVQL
PAFNPRDVKFEHNMDYGAGAYLLAASEMLRLA

Sequences:

>Translated_352_residues
MSNMTQQTRTQQARETMKRVYRYQAANQTRSVIRRSGKTRFIKDTDWERGVFWSCVAAAWLATDDAEYLEGVMNYTLHTG
FRPGPNLRFADDLICCQAYLDVWPQIAVPEALEPTIKAVSAMVDEPKPGREDWWWCDSLFMAPATFAALSQRTGDARYLA
YMDTAFWDAVDYLRDPDSGLFYRDHRYIPDGNGTELREENGEKVFWSRGIGWVLAAIPRLLARMPEDYTGRQRYLDLFTD
LADNVIRYQQADGLWRTSLLDPQRFPAPESSATALFCYGLSWGINQGILAPETYLPVVEKAWDALQGCIHDNGMMGWVQL
PAFNPRDVKFEHNMDYGAGAYLLAASEMLRLA
>Mature_351_residues
SNMTQQTRTQQARETMKRVYRYQAANQTRSVIRRSGKTRFIKDTDWERGVFWSCVAAAWLATDDAEYLEGVMNYTLHTGF
RPGPNLRFADDLICCQAYLDVWPQIAVPEALEPTIKAVSAMVDEPKPGREDWWWCDSLFMAPATFAALSQRTGDARYLAY
MDTAFWDAVDYLRDPDSGLFYRDHRYIPDGNGTELREENGEKVFWSRGIGWVLAAIPRLLARMPEDYTGRQRYLDLFTDL
ADNVIRYQQADGLWRTSLLDPQRFPAPESSATALFCYGLSWGINQGILAPETYLPVVEKAWDALQGCIHDNGMMGWVQLP
AFNPRDVKFEHNMDYGAGAYLLAASEMLRLA

Specific function: Unknown

COG id: COG4225

COG function: function code R; Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40287; Mature: 40156

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNMTQQTRTQQARETMKRVYRYQAANQTRSVIRRSGKTRFIKDTDWERGVFWSCVAAAW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHH
LATDDAEYLEGVMNYTLHTGFRPGPNLRFADDLICCQAYLDVWPQIAVPEALEPTIKAVS
HCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AMVDEPKPGREDWWWCDSLFMAPATFAALSQRTGDARYLAYMDTAFWDAVDYLRDPDSGL
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCC
FYRDHRYIPDGNGTELREENGEKVFWSRGIGWVLAAIPRLLARMPEDYTGRQRYLDLFTD
EEECCEECCCCCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LADNVIRYQQADGLWRTSLLDPQRFPAPESSATALFCYGLSWGINQGILAPETYLPVVEK
HHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH
AWDALQGCIHDNGMMGWVQLPAFNPRDVKFEHNMDYGAGAYLLAASEMLRLA
HHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SNMTQQTRTQQARETMKRVYRYQAANQTRSVIRRSGKTRFIKDTDWERGVFWSCVAAAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHH
LATDDAEYLEGVMNYTLHTGFRPGPNLRFADDLICCQAYLDVWPQIAVPEALEPTIKAVS
HCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AMVDEPKPGREDWWWCDSLFMAPATFAALSQRTGDARYLAYMDTAFWDAVDYLRDPDSGL
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCC
FYRDHRYIPDGNGTELREENGEKVFWSRGIGWVLAAIPRLLARMPEDYTGRQRYLDLFTD
EEECCEECCCCCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LADNVIRYQQADGLWRTSLLDPQRFPAPESSATALFCYGLSWGINQGILAPETYLPVVEK
HHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH
AWDALQGCIHDNGMMGWVQLPAFNPRDVKFEHNMDYGAGAYLLAASEMLRLA
HHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA