| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947246
Identifier: 153947246
GI number: 153947246
Start: 585227
End: 586960
Strand: Reverse
Name: 153947246
Synonym: YpsIP31758_0504
Alternate gene names: NA
Gene position: 586960-585227 (Counterclockwise)
Preceding gene: 153947845
Following gene: 153949332
Centisome position: 12.43
GC content: 51.67
Gene sequence:
>1734_bases ATGGATATTAACGATAATCTGCATCAAGACGATTTACGCCAAGACGATGTGTACCAAAAGGTGTTGCGTTTACTACTGGA CGAGGCCGGAATTGTTCTCCCAGAGACTGAGTTAGCGGCACTCAAGCAAGATACCGCGATCCGCTCCCTGCTCAATGATC TTCTCGCCAGCGTCAGCGCCAAGGCTGAACATCTCGCTCTGGCTAACAATGAAACGGTAACCGATGATCGTCAGCAGTTA GCCTCCTTGACGGAAGAGAACAGTCATGAAGTGATTAGGGGCGAGGAAAATATCGTCAAAGAGCCTGACCAGCATAACGA GCGGCTGCTATTAGCTGAAACATTATCCGCTAAAACACTGGAACCGAATCCTCCTGCTGACGTATTACCTCCCATTGAAA TACACCATAAGGTGCCGGTCGAAGAAGAATCATGGCAAGCGATGCTGTTTTCCCCGATTGAGCAGCACGCCAATACAGCC TCATCGGCTGCGGGCACCAAACCGCTCAGACCGGGTCAGATTCCCGTGGGTATGCCCAATCCAGCCAACTGCCCGCCTCA ATACACTCAGCCGAAGGCAAAAATTAATATCGCCAACGCCCGTGTCGGCACCCCTTTTCACTCTGACGTCGATATCTCAC TCGATAACGGGGCCAAAGCTGAAATTCTGGACGTGTCTTTTGCAAAGGACATTGGTCTTATCTTCGATCAAGCGACCTCT TCGCTTTCAGGCACCCCAACGGAAAGTGGCGATATTGAGGCAACGGTGACGTGGTCCTGCCATTCAGCCCCCTACTTTTC AACCAAGGTGCTTTTTATCGTGAACCCGGACCCGCGCAGTTTATGGAAAATCCTTGAGCCGCCCGCTGATGATCGCTATT TCAAAGAGAATGTGGATCACAAGCTGATCAGCGCGCCAGGTGTCAATATTGCGGCGGCTAGCCGCAGAGGGCGCTCACAT GAACATGTGGGATCATTCCGGGATGATGATTTCTTTATCTCCAGTAATCACGATACCGGCTGGAACATCATGCTCGTGGC AGACGGTGCCGGAAGTGCCAAAAATTCCCGCAAAGGCTCGCAAATTGTCACGGAGACGGTGGGTCACTATCTGTCTGCCC AACTGAGCGGCGATAAGGGGCGCGAATTAAAAGAGCGGATTATAAACTGGACCCCCGAGGACCAGCGGGTTGTCGGAGAG ACCTTTATTCGGCAGTTTCACCACGCCTCGGTCATTGCGATCAACAATATTAAAAATGAATCGTTGATCGCAGAAGAGAC CGTAAAGTCATACTCAACCACGCTGTTGGCAACGGTCTCGTTTCGTACCGGTACTGAGCTTTTCGCCGCCGCCTTCTGGA TGGGCGACGGGGCTATTGCGGCCTACGGCCCGGTTGGAAGAGTACGCATTCTGGGCACGCCAGACAGTGGCGAATATGCA GGTCAAACACGTTTTCTTGATGTCGATGCCGTTGGTGATCCGGAATTCAGTAAAAGGGTCAGTATCGGAAAATGGACGGG TATCTCTCATTTGGTCTTGATGACCGATGGCGTGTCAGACCCCCGGTTTGAAACGGATAATGGTCTGCAAAATCCGCAAA AATGGGATGCGCTGATAGCAGAGATCTCCCCCTGTCTGAACGATAATCCGCAAGCGGCTGAACAGTTGGCGGAATGGCTA AACTTTTTCTCTCCAGGCAATCATGACGATCGGACAATGGTCGTTTCGTGGTGA
Upstream 100 bases:
>100_bases ATGGCGCGGATGATGTTATCTGCCCGTGGTGTGATAGAGGGCTGACCTTTAATGTGGATGGGGGCGGATCTGACTTCGAT GTTATCCGGGGGAGAGGCTA
Downstream 100 bases:
>100_bases TCGGACTGAATTTTATTGCTGGTGAGTAATTATGGCGAATATTGTTACCTGTACGACAAAAGATGGCGAAACCATCCAGT ACGTTGACGAGATCATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MDINDNLHQDDLRQDDVYQKVLRLLLDEAGIVLPETELAALKQDTAIRSLLNDLLASVSAKAEHLALANNETVTDDRQQL ASLTEENSHEVIRGEENIVKEPDQHNERLLLAETLSAKTLEPNPPADVLPPIEIHHKVPVEEESWQAMLFSPIEQHANTA SSAAGTKPLRPGQIPVGMPNPANCPPQYTQPKAKINIANARVGTPFHSDVDISLDNGAKAEILDVSFAKDIGLIFDQATS SLSGTPTESGDIEATVTWSCHSAPYFSTKVLFIVNPDPRSLWKILEPPADDRYFKENVDHKLISAPGVNIAAASRRGRSH EHVGSFRDDDFFISSNHDTGWNIMLVADGAGSAKNSRKGSQIVTETVGHYLSAQLSGDKGRELKERIINWTPEDQRVVGE TFIRQFHHASVIAINNIKNESLIAEETVKSYSTTLLATVSFRTGTELFAAAFWMGDGAIAAYGPVGRVRILGTPDSGEYA GQTRFLDVDAVGDPEFSKRVSIGKWTGISHLVLMTDGVSDPRFETDNGLQNPQKWDALIAEISPCLNDNPQAAEQLAEWL NFFSPGNHDDRTMVVSW
Sequences:
>Translated_577_residues MDINDNLHQDDLRQDDVYQKVLRLLLDEAGIVLPETELAALKQDTAIRSLLNDLLASVSAKAEHLALANNETVTDDRQQL ASLTEENSHEVIRGEENIVKEPDQHNERLLLAETLSAKTLEPNPPADVLPPIEIHHKVPVEEESWQAMLFSPIEQHANTA SSAAGTKPLRPGQIPVGMPNPANCPPQYTQPKAKINIANARVGTPFHSDVDISLDNGAKAEILDVSFAKDIGLIFDQATS SLSGTPTESGDIEATVTWSCHSAPYFSTKVLFIVNPDPRSLWKILEPPADDRYFKENVDHKLISAPGVNIAAASRRGRSH EHVGSFRDDDFFISSNHDTGWNIMLVADGAGSAKNSRKGSQIVTETVGHYLSAQLSGDKGRELKERIINWTPEDQRVVGE TFIRQFHHASVIAINNIKNESLIAEETVKSYSTTLLATVSFRTGTELFAAAFWMGDGAIAAYGPVGRVRILGTPDSGEYA GQTRFLDVDAVGDPEFSKRVSIGKWTGISHLVLMTDGVSDPRFETDNGLQNPQKWDALIAEISPCLNDNPQAAEQLAEWL NFFSPGNHDDRTMVVSW >Mature_577_residues MDINDNLHQDDLRQDDVYQKVLRLLLDEAGIVLPETELAALKQDTAIRSLLNDLLASVSAKAEHLALANNETVTDDRQQL ASLTEENSHEVIRGEENIVKEPDQHNERLLLAETLSAKTLEPNPPADVLPPIEIHHKVPVEEESWQAMLFSPIEQHANTA SSAAGTKPLRPGQIPVGMPNPANCPPQYTQPKAKINIANARVGTPFHSDVDISLDNGAKAEILDVSFAKDIGLIFDQATS SLSGTPTESGDIEATVTWSCHSAPYFSTKVLFIVNPDPRSLWKILEPPADDRYFKENVDHKLISAPGVNIAAASRRGRSH EHVGSFRDDDFFISSNHDTGWNIMLVADGAGSAKNSRKGSQIVTETVGHYLSAQLSGDKGRELKERIINWTPEDQRVVGE TFIRQFHHASVIAINNIKNESLIAEETVKSYSTTLLATVSFRTGTELFAAAFWMGDGAIAAYGPVGRVRILGTPDSGEYA GQTRFLDVDAVGDPEFSKRVSIGKWTGISHLVLMTDGVSDPRFETDNGLQNPQKWDALIAEISPCLNDNPQAAEQLAEWL NFFSPGNHDDRTMVVSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63325; Mature: 63325
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDINDNLHQDDLRQDDVYQKVLRLLLDEAGIVLPETELAALKQDTAIRSLLNDLLASVSA CCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHC KAEHLALANNETVTDDRQQLASLTEENSHEVIRGEENIVKEPDQHNERLLLAETLSAKTL CHHHEEECCCCCCCHHHHHHHHHHCCCCCCEECCCHHHHCCCCCCCCEEEEEECCCCCCC EPNPPADVLPPIEIHHKVPVEEESWQAMLFSPIEQHANTASSAAGTKPLRPGQIPVGMPN CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCC PANCPPQYTQPKAKINIANARVGTPFHSDVDISLDNGAKAEILDVSFAKDIGLIFDQATS CCCCCCCCCCCCCEEEEECCEECCCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHC SLSGTPTESGDIEATVTWSCHSAPYFSTKVLFIVNPDPRSLWKILEPPADDRYFKENVDH CCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHCCCC KLISAPGVNIAAASRRGRSHEHVGSFRDDDFFISSNHDTGWNIMLVADGAGSAKNSRKGS EEECCCCCCEEECCCCCCCHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCH QIVTETVGHYLSAQLSGDKGRELKERIINWTPEDQRVVGETFIRQFHHASVIAINNIKNE HHHHHHHHHHHEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCC SLIAEETVKSYSTTLLATVSFRTGTELFAAAFWMGDGAIAAYGPVGRVRILGTPDSGEYA HHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHEECCCCEEEECCCCEEEEEECCCCCCCC GQTRFLDVDAVGDPEFSKRVSIGKWTGISHLVLMTDGVSDPRFETDNGLQNPQKWDALIA CCEEEEEEECCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH EISPCLNDNPQAAEQLAEWLNFFSPGNHDDRTMVVSW HHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEC >Mature Secondary Structure MDINDNLHQDDLRQDDVYQKVLRLLLDEAGIVLPETELAALKQDTAIRSLLNDLLASVSA CCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHC KAEHLALANNETVTDDRQQLASLTEENSHEVIRGEENIVKEPDQHNERLLLAETLSAKTL CHHHEEECCCCCCCHHHHHHHHHHCCCCCCEECCCHHHHCCCCCCCCEEEEEECCCCCCC EPNPPADVLPPIEIHHKVPVEEESWQAMLFSPIEQHANTASSAAGTKPLRPGQIPVGMPN CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCC PANCPPQYTQPKAKINIANARVGTPFHSDVDISLDNGAKAEILDVSFAKDIGLIFDQATS CCCCCCCCCCCCCEEEEECCEECCCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHC SLSGTPTESGDIEATVTWSCHSAPYFSTKVLFIVNPDPRSLWKILEPPADDRYFKENVDH CCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHCCCC KLISAPGVNIAAASRRGRSHEHVGSFRDDDFFISSNHDTGWNIMLVADGAGSAKNSRKGS EEECCCCCCEEECCCCCCCHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCH QIVTETVGHYLSAQLSGDKGRELKERIINWTPEDQRVVGETFIRQFHHASVIAINNIKNE HHHHHHHHHHHEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCC SLIAEETVKSYSTTLLATVSFRTGTELFAAAFWMGDGAIAAYGPVGRVRILGTPDSGEYA HHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHEECCCCEEEECCCCEEEEEECCCCCCCC GQTRFLDVDAVGDPEFSKRVSIGKWTGISHLVLMTDGVSDPRFETDNGLQNPQKWDALIA CCEEEEEEECCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH EISPCLNDNPQAAEQLAEWLNFFSPGNHDDRTMVVSW HHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA