Click here to switch to the map view.

The map label for this gene is 153947187

Identifier: 153947187

GI number: 153947187

Start: 2815051

End: 2816652

Strand: Reverse

Name: 153947187

Synonym: YpsIP31758_2492

Alternate gene names: NA

Gene position: 2816652-2815051 (Counterclockwise)

Preceding gene: 153950131

Following gene: 153949427

Centisome position: 59.63

GC content: 60.05

Gene sequence:

>1602_bases
ATGGCGACGTTAACTACCTTGCTCACCGCTTGTGCCGCAGAGCCTGAGCCACTTTTACAGCAGGCCAGACAACAGGTTGC
GCTCTGGGAACGTTGGTTGCAACCGGTGACACCCGATAAGCATACCGGTGAAGACCCCGGTTACGATGACCACTTCCAAC
AGATGCGTGAAGAGGTCAATAAGCTCTCGGGTGCCGATACCACGCTGACCTGCGAGCTGGCTGAAAAGCTGTTCACCACA
CACGGCAAGGATGTGCGGGTGGCAACCTATTACGTCTGGGCGCGGTTGCACCGTGACGGCGAGGCCGGGCTGGCGGATGG
CCTTTCCCTGCTGGCTGGGCTGATCACGCGCTTTGGTGAGGGCCTGCATCCGCTGCGTGCAACCAGCCGGAAAACCGCGT
TGGAGTGGCTGGCCGGTTCCCGGATGCGCGACAGCTTGTCACTTTACCCGGAAGTGGATAAAGCCGATTTTGAGCGTATC
GTGGGCGCACTGGCCCTTATCGAACAGGGGCTCAGTCTCTGGGACGAAGGTGTCCGGCCGCAACTGGGCGGGTTGTATAC
CGCCCTGGAAAACCGCCTCGTGCAATCTGGTGGGCTAAATGCCGTGGTGCCGCAAAACAGCAGCGGGTCATCATCGGCAG
GCAGCTTGAACCCAGCCAACACGGCGTCACCGGCGTTGCGGCCAGTGCAATCGGGACGTGACCTGCTCGATCAGACCAAA
ACGCTGGCAAAATACCTGCGCAACCAGCCGCAGGGCTGGCTCTCCGGGCATCATCTTATCAAAAGCGTGCGCTGGGATAC
GGTACACCAGTCACCGCCGTTGGATGTGAACGGACGGACCCGGCTGGTACCGCCGCGCCCGGAATATCGCGTACAACTCA
AGCGCCTTTATCTGCAACAAAACTGGCTGGCGTTGCTGGAACAGGCCGAATCGATATTTGCCGAAGGGGTTAACCATTTC
TGGCTCGATGTGCAGTGGTACCTGCATCAGGCCCTCAGCAAAGCGGGGGCCCCATTCGATGGCTGGGCGAGCTGTATCAC
GCAGGATTTACGGTTATTACTGACCCGGCTGCCGGGGCTGGAAGGGCTATGCTGGAGTGACGGCACGCCATTTGCCGATG
AGGTGACGCTGGGGTGGATAAACCAGCAGGTACTGGAGTCGGTCTCGGGCTGGGGCAGCGAGCCGGCCGCCGTTTCATCC
GGTGAGGATGGCATTCTGTTGCTGGAGCCAGAAGCTTTGGCTCAGGCGGACAGCGAAGGAATTGAAGCGGCGCTTAACTG
GTTGCAGTCACGACCGGGGATCACCACGGCGCGCCATCAGTGGCTGCTGCGTCTGGTGATGGCCCGGGTGGCGGAGCAGT
ACGGTAAGAACGATATGGCCTTGCATCTGCTGAGTGGCCTTGATAGCAGCGGCGCGTTGTTGACCTTGCCACAGTGGGAG
CCGGGGTTGGTGTTTGAAGTTAAAGCCCGCCGTTTGAAGCTGTTGCGTATGAAGGCACAGCGGGGTGACAGTGATAAAAC
CCGCCTGCATGCTGAAATGGAAAGCCTGCTCAGTGGGCTTATCGCCCTCGACCCGGCCCGTGCGGCCGTATTATGCGGAT
AA

Upstream 100 bases:

>100_bases
ATAATATCCGCTGGCCGCAAGATATTGATCGAGAATCGACTACGGCACCGGATTGAACCCAAACAGATTGCCCCCCCAAT
AAACACCCACAGGAGCCGTT

Downstream 100 bases:

>100_bases
CAGAGAAGGAACAGACAATGGCAAAAGGCTATTACCTTGGGGTTGGGGATGAAACAACCTGCGGCGGCGTGATCATCGAA
GGTGACGCCACACATGTCTT

Product: ImpA domain-containing protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; Type VI Secretion System Protein VasJ; ImpA N-Terminal; Conserved Protein; ImpA-Like Protein

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MATLTTLLTACAAEPEPLLQQARQQVALWERWLQPVTPDKHTGEDPGYDDHFQQMREEVNKLSGADTTLTCELAEKLFTT
HGKDVRVATYYVWARLHRDGEAGLADGLSLLAGLITRFGEGLHPLRATSRKTALEWLAGSRMRDSLSLYPEVDKADFERI
VGALALIEQGLSLWDEGVRPQLGGLYTALENRLVQSGGLNAVVPQNSSGSSSAGSLNPANTASPALRPVQSGRDLLDQTK
TLAKYLRNQPQGWLSGHHLIKSVRWDTVHQSPPLDVNGRTRLVPPRPEYRVQLKRLYLQQNWLALLEQAESIFAEGVNHF
WLDVQWYLHQALSKAGAPFDGWASCITQDLRLLLTRLPGLEGLCWSDGTPFADEVTLGWINQQVLESVSGWGSEPAAVSS
GEDGILLLEPEALAQADSEGIEAALNWLQSRPGITTARHQWLLRLVMARVAEQYGKNDMALHLLSGLDSSGALLTLPQWE
PGLVFEVKARRLKLLRMKAQRGDSDKTRLHAEMESLLSGLIALDPARAAVLCG

Sequences:

>Translated_533_residues
MATLTTLLTACAAEPEPLLQQARQQVALWERWLQPVTPDKHTGEDPGYDDHFQQMREEVNKLSGADTTLTCELAEKLFTT
HGKDVRVATYYVWARLHRDGEAGLADGLSLLAGLITRFGEGLHPLRATSRKTALEWLAGSRMRDSLSLYPEVDKADFERI
VGALALIEQGLSLWDEGVRPQLGGLYTALENRLVQSGGLNAVVPQNSSGSSSAGSLNPANTASPALRPVQSGRDLLDQTK
TLAKYLRNQPQGWLSGHHLIKSVRWDTVHQSPPLDVNGRTRLVPPRPEYRVQLKRLYLQQNWLALLEQAESIFAEGVNHF
WLDVQWYLHQALSKAGAPFDGWASCITQDLRLLLTRLPGLEGLCWSDGTPFADEVTLGWINQQVLESVSGWGSEPAAVSS
GEDGILLLEPEALAQADSEGIEAALNWLQSRPGITTARHQWLLRLVMARVAEQYGKNDMALHLLSGLDSSGALLTLPQWE
PGLVFEVKARRLKLLRMKAQRGDSDKTRLHAEMESLLSGLIALDPARAAVLCG
>Mature_532_residues
ATLTTLLTACAAEPEPLLQQARQQVALWERWLQPVTPDKHTGEDPGYDDHFQQMREEVNKLSGADTTLTCELAEKLFTTH
GKDVRVATYYVWARLHRDGEAGLADGLSLLAGLITRFGEGLHPLRATSRKTALEWLAGSRMRDSLSLYPEVDKADFERIV
GALALIEQGLSLWDEGVRPQLGGLYTALENRLVQSGGLNAVVPQNSSGSSSAGSLNPANTASPALRPVQSGRDLLDQTKT
LAKYLRNQPQGWLSGHHLIKSVRWDTVHQSPPLDVNGRTRLVPPRPEYRVQLKRLYLQQNWLALLEQAESIFAEGVNHFW
LDVQWYLHQALSKAGAPFDGWASCITQDLRLLLTRLPGLEGLCWSDGTPFADEVTLGWINQQVLESVSGWGSEPAAVSSG
EDGILLLEPEALAQADSEGIEAALNWLQSRPGITTARHQWLLRLVMARVAEQYGKNDMALHLLSGLDSSGALLTLPQWEP
GLVFEVKARRLKLLRMKAQRGDSDKTRLHAEMESLLSGLIALDPARAAVLCG

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58760; Mature: 58629

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLTTLLTACAAEPEPLLQQARQQVALWERWLQPVTPDKHTGEDPGYDDHFQQMREEVN
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KLSGADTTLTCELAEKLFTTHGKDVRVATYYVWARLHRDGEAGLADGLSLLAGLITRFGE
HHCCCCCEEEHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
GLHPLRATSRKTALEWLAGSRMRDSLSLYPEVDKADFERIVGALALIEQGLSLWDEGVRP
CCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
QLGGLYTALENRLVQSGGLNAVVPQNSSGSSSAGSLNPANTASPALRPVQSGRDLLDQTK
HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TLAKYLRNQPQGWLSGHHLIKSVRWDTVHQSPPLDVNGRTRLVPPRPEYRVQLKRLYLQQ
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
NWLALLEQAESIFAEGVNHFWLDVQWYLHQALSKAGAPFDGWASCITQDLRLLLTRLPGL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
EGLCWSDGTPFADEVTLGWINQQVLESVSGWGSEPAAVSSGEDGILLLEPEALAQADSEG
CCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHCCHHH
IEAALNWLQSRPGITTARHQWLLRLVMARVAEQYGKNDMALHLLSGLDSSGALLTLPQWE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCCC
PGLVFEVKARRLKLLRMKAQRGDSDKTRLHAEMESLLSGLIALDPARAAVLCG
CCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
ATLTTLLTACAAEPEPLLQQARQQVALWERWLQPVTPDKHTGEDPGYDDHFQQMREEVN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KLSGADTTLTCELAEKLFTTHGKDVRVATYYVWARLHRDGEAGLADGLSLLAGLITRFGE
HHCCCCCEEEHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
GLHPLRATSRKTALEWLAGSRMRDSLSLYPEVDKADFERIVGALALIEQGLSLWDEGVRP
CCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
QLGGLYTALENRLVQSGGLNAVVPQNSSGSSSAGSLNPANTASPALRPVQSGRDLLDQTK
HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TLAKYLRNQPQGWLSGHHLIKSVRWDTVHQSPPLDVNGRTRLVPPRPEYRVQLKRLYLQQ
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
NWLALLEQAESIFAEGVNHFWLDVQWYLHQALSKAGAPFDGWASCITQDLRLLLTRLPGL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
EGLCWSDGTPFADEVTLGWINQQVLESVSGWGSEPAAVSSGEDGILLLEPEALAQADSEG
CCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHCCHHH
IEAALNWLQSRPGITTARHQWLLRLVMARVAEQYGKNDMALHLLSGLDSSGALLTLPQWE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCCC
PGLVFEVKARRLKLLRMKAQRGDSDKTRLHAEMESLLSGLIALDPARAAVLCG
CCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA