| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947174
Identifier: 153947174
GI number: 153947174
Start: 4487188
End: 4487652
Strand: Reverse
Name: 153947174
Synonym: YpsIP31758_3999
Alternate gene names: NA
Gene position: 4487652-4487188 (Counterclockwise)
Preceding gene: 153948329
Following gene: 153947967
Centisome position: 95.01
GC content: 35.91
Gene sequence:
>465_bases ATGAAAGTAAAAAGTAAAAAAAATCTCTGGGCGCTATTACTGACGGGCAGCGCTTTACTGGGTTATGTTTTCTGGTTGTT ACTGCATCCGGTGGAAATTGTCTCTGTTCATCAGAGAAATGATTACAGTGATGTTTTAGTGAGGAACTTCCCTTTAACTG ATAAAAGTAAAATAAACTGGTGGCTGGAAAATAGGGATATGCTGAAGGATAAATACAGTATTCCCAAACCGGCATCTGAT GGTTTTTACACTGTCATATTTTGGGATTTTGGCGACGGCTATAAAGAAGAGGGTAAATATGACAGACGATGCTTTGATGA TATGAAAACCAGTAAGAATTGCATTGATAAAAACAAGGTTTTCTCTGTCGAGAATGACAGAAATAAAGATATATTGTTTA GCGTTTACGATGGAATGTATCGCTTAGAGAAGAATGGCAAGATAGTTAAAATAAAACGTGAATAA
Upstream 100 bases:
>100_bases TTATTCCGCATAGGGTTTGTTCTCCAACGATTCAACCAGTTTAGTTTCAAGCCATTTATGACCAATATGGAAGCCACCGT AGAGATTGCCGGGAGCCGCA
Downstream 100 bases:
>100_bases AATTTTTTTTCTCGCGTAGTGACCGTGTTTCACAGGGCACAAACCCGTTTGGCTTCAAGCCATTTATGACCAATATGGAA GCCACCGTAGAGATTGCCGG
Product: entero membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKVKSKKNLWALLLTGSALLGYVFWLLLHPVEIVSVHQRNDYSDVLVRNFPLTDKSKINWWLENRDMLKDKYSIPKPASD GFYTVIFWDFGDGYKEEGKYDRRCFDDMKTSKNCIDKNKVFSVENDRNKDILFSVYDGMYRLEKNGKIVKIKRE
Sequences:
>Translated_154_residues MKVKSKKNLWALLLTGSALLGYVFWLLLHPVEIVSVHQRNDYSDVLVRNFPLTDKSKINWWLENRDMLKDKYSIPKPASD GFYTVIFWDFGDGYKEEGKYDRRCFDDMKTSKNCIDKNKVFSVENDRNKDILFSVYDGMYRLEKNGKIVKIKRE >Mature_154_residues MKVKSKKNLWALLLTGSALLGYVFWLLLHPVEIVSVHQRNDYSDVLVRNFPLTDKSKINWWLENRDMLKDKYSIPKPASD GFYTVIFWDFGDGYKEEGKYDRRCFDDMKTSKNCIDKNKVFSVENDRNKDILFSVYDGMYRLEKNGKIVKIKRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18275; Mature: 18275
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKSKKNLWALLLTGSALLGYVFWLLLHPVEIVSVHQRNDYSDVLVRNFPLTDKSKINW CCCCCCCCEEEEEEECHHHHHHHHHHHHCHHHEEEEECCCCCCCEEEECCCCCCCCCEEE WLENRDMLKDKYSIPKPASDGFYTVIFWDFGDGYKEEGKYDRRCFDDMKTSKNCIDKNKV EECCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCE FSVENDRNKDILFSVYDGMYRLEKNGKIVKIKRE EEECCCCCCEEEEEECCCEEEECCCCCEEEEECC >Mature Secondary Structure MKVKSKKNLWALLLTGSALLGYVFWLLLHPVEIVSVHQRNDYSDVLVRNFPLTDKSKINW CCCCCCCCEEEEEEECHHHHHHHHHHHHCHHHEEEEECCCCCCCEEEECCCCCCCCCEEE WLENRDMLKDKYSIPKPASDGFYTVIFWDFGDGYKEEGKYDRRCFDDMKTSKNCIDKNKV EECCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCE FSVENDRNKDILFSVYDGMYRLEKNGKIVKIKRE EEECCCCCCEEEEEECCCEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA