| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is hisC
Identifier: 153947135
GI number: 153947135
Start: 2739235
End: 2740383
Strand: Direct
Name: hisC
Synonym: YpsIP31758_2430
Alternate gene names: 153947135
Gene position: 2739235-2740383 (Clockwise)
Preceding gene: 153947701
Following gene: 153950620
Centisome position: 57.99
GC content: 51.78
Gene sequence:
>1149_bases ATGAGCCAATCTAATAACGTCACGGACCTGGCCCGTGCCAACATCCGTGCTCTGACTCCCTATATGTCCGCACGTCGGTT AGGCGGTAATGGCGATGTCTGGCTGAATGCCAACGAATATCCGCTGGGCACTGAATATCAGTTGACCACGCAAACCTTCA ATCGCTATCCCGAGTGTCAGCCTAAGCACGTTATTGAGCGCTATGCCGCTTACGCCGGTTTACCGCCAGAGCAAGTACTG GTTAGTCGTGGTGCTGATGAAGGGATCGAACTGCTGATCCGCGCGTTCTGTGAGCCGGGTCAGGATGCCATTTTATTCTG CCCACCAACCTACGGTATGTACGCTGTCAGTGCTGAAACCTTTGGTGTAGAACGGCGCACCGTACCCGCTCAGGCTGACT GGCAGTTAGATTTACCGGCCATTGCCAACAATCTGGAACAGGTAAAAGTGATCTATGTTTGCAGCCCAAATAACCCGACG GGTAATTTAATCAACCCGGCTGATTTACAGGCGGTGCTGGCACTGGCGCAAGGCCGCGCGATTGTCGCCATCGACGAAGC CTATATTGAGTTTTGTCCACAAGCATCGGTCAGTAATTGGCTAAAAGATTATCCGAATTTAGTGATTTTGCGCACCTTAT CGAAAGCCTTTGCATTAGCGGGTTTACGTTGTGGCTTTACGTTAGCCAACAGCGATATCATCCAATTGTTGCTTAAAGTG ATCGCCCCCTATCCGTTATCTACGCCAGTGGCGGATATTGCCGCGCAAGCACTCAGCCCACAGGGGATTGAGCAAATGCG CCAACGGGTCAGTGAAGTACGAGCTAACCGCGCATGGCTACAATCCGCACTGCAAGATTGCGCCTGTGTCGAACAGGTGT TCACCAGCGAAAGCAACTATTTGCTGGTCCGCTTTACCGCGTCCAGCAGCGTATTCAAGGTATTGTGGGATCAGGGCATT ATTTTGCGCGATCAAAATAAACAACCGGGGTTAGCCAACTGCCTGCGCATCACCATTGGCACCCGTCAGGAGTGTGAGCG AGTGATTGCCGCCCTTGCCCCCCTGGCCGGCATTGATAACTCAAATAACATTGATAACCAGAGTAAAACCCATTCTCAGA CCTCCAGCATCCGTAAGGGAACGATATGA
Upstream 100 bases:
>100_bases CACTGGCACAGGCCGAACAACTGACCGCACACAAAAATGCAGTTACCCTGCGCGTTACCGCCTTGAATAACGCCCTGACC GCCGTGAATAAGGAGTAAGC
Downstream 100 bases:
>100_bases GCCAGAAATTTCTTTTTATTGACCGCGACGGCACCATCATTGCCGAGCCACCAACTGATTATCAGGTTGACCGGTTGGAT AAACTGGCGCTGGAGCCTGA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSQSNNVTDLARANIRALTPYMSARRLGGNGDVWLNANEYPLGTEYQLTTQTFNRYPECQPKHVIERYAAYAGLPPEQVL VSRGADEGIELLIRAFCEPGQDAILFCPPTYGMYAVSAETFGVERRTVPAQADWQLDLPAIANNLEQVKVIYVCSPNNPT GNLINPADLQAVLALAQGRAIVAIDEAYIEFCPQASVSNWLKDYPNLVILRTLSKAFALAGLRCGFTLANSDIIQLLLKV IAPYPLSTPVADIAAQALSPQGIEQMRQRVSEVRANRAWLQSALQDCACVEQVFTSESNYLLVRFTASSSVFKVLWDQGI ILRDQNKQPGLANCLRITIGTRQECERVIAALAPLAGIDNSNNIDNQSKTHSQTSSIRKGTI
Sequences:
>Translated_382_residues MSQSNNVTDLARANIRALTPYMSARRLGGNGDVWLNANEYPLGTEYQLTTQTFNRYPECQPKHVIERYAAYAGLPPEQVL VSRGADEGIELLIRAFCEPGQDAILFCPPTYGMYAVSAETFGVERRTVPAQADWQLDLPAIANNLEQVKVIYVCSPNNPT GNLINPADLQAVLALAQGRAIVAIDEAYIEFCPQASVSNWLKDYPNLVILRTLSKAFALAGLRCGFTLANSDIIQLLLKV IAPYPLSTPVADIAAQALSPQGIEQMRQRVSEVRANRAWLQSALQDCACVEQVFTSESNYLLVRFTASSSVFKVLWDQGI ILRDQNKQPGLANCLRITIGTRQECERVIAALAPLAGIDNSNNIDNQSKTHSQTSSIRKGTI >Mature_381_residues SQSNNVTDLARANIRALTPYMSARRLGGNGDVWLNANEYPLGTEYQLTTQTFNRYPECQPKHVIERYAAYAGLPPEQVLV SRGADEGIELLIRAFCEPGQDAILFCPPTYGMYAVSAETFGVERRTVPAQADWQLDLPAIANNLEQVKVIYVCSPNNPTG NLINPADLQAVLALAQGRAIVAIDEAYIEFCPQASVSNWLKDYPNLVILRTLSKAFALAGLRCGFTLANSDIIQLLLKVI APYPLSTPVADIAAQALSPQGIEQMRQRVSEVRANRAWLQSALQDCACVEQVFTSESNYLLVRFTASSSVFKVLWDQGII LRDQNKQPGLANCLRITIGTRQECERVIAALAPLAGIDNSNNIDNQSKTHSQTSSIRKGTI
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=347, Percent_Identity=74.3515850144092, Blast_Score=548, Evalue=1e-157, Organism=Saccharomyces cerevisiae, GI6322075, Length=368, Percent_Identity=31.7934782608696, Blast_Score=173, Evalue=4e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_YERP3 (A7FJH1)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001401399.1 - ProteinModelPortal: A7FJH1 - SMR: A7FJH1 - STRING: A7FJH1 - GeneID: 5385985 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_2430 - NMPDR: fig|349747.3.peg.113 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: FKTLWDQ - ProtClustDB: PRK01688 - BioCyc: YPSE349747:YPSIP31758_2430-MONOMER - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 41947; Mature: 41816
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSNNVTDLARANIRALTPYMSARRLGGNGDVWLNANEYPLGTEYQLTTQTFNRYPECQ CCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEHHHHHCCCCCC PKHVIERYAAYAGLPPEQVLVSRGADEGIELLIRAFCEPGQDAILFCPPTYGMYAVSAET HHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEHHH FGVERRTVPAQADWQLDLPAIANNLEQVKVIYVCSPNNPTGNLINPADLQAVLALAQGRA HCCCCCCCCCCCCCEEECHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCE IVAIDEAYIEFCPQASVSNWLKDYPNLVILRTLSKAFALAGLRCGFTLANSDIIQLLLKV EEEEEHHHHHHCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCEEECCHHHHHHHHHH IAPYPLSTPVADIAAQALSPQGIEQMRQRVSEVRANRAWLQSALQDCACVEQVFTSESNY HCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LLVRFTASSSVFKVLWDQGIILRDQNKQPGLANCLRITIGTRQECERVIAALAPLAGIDN EEEEEECCCHHHHHHHCCCEEEECCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHCCCC SNNIDNQSKTHSQTSSIRKGTI CCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SQSNNVTDLARANIRALTPYMSARRLGGNGDVWLNANEYPLGTEYQLTTQTFNRYPECQ CCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEHHHHHCCCCCC PKHVIERYAAYAGLPPEQVLVSRGADEGIELLIRAFCEPGQDAILFCPPTYGMYAVSAET HHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEHHH FGVERRTVPAQADWQLDLPAIANNLEQVKVIYVCSPNNPTGNLINPADLQAVLALAQGRA HCCCCCCCCCCCCCEEECHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCE IVAIDEAYIEFCPQASVSNWLKDYPNLVILRTLSKAFALAGLRCGFTLANSDIIQLLLKV EEEEEHHHHHHCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCEEECCHHHHHHHHHH IAPYPLSTPVADIAAQALSPQGIEQMRQRVSEVRANRAWLQSALQDCACVEQVFTSESNY HCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LLVRFTASSSVFKVLWDQGIILRDQNKQPGLANCLRITIGTRQECERVIAALAPLAGIDN EEEEEECCCHHHHHHHCCCEEEECCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHCCCC SNNIDNQSKTHSQTSSIRKGTI CCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA