| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is fieF [H]
Identifier: 153947110
GI number: 153947110
Start: 93730
End: 94632
Strand: Direct
Name: fieF [H]
Synonym: YpsIP31758_0088
Alternate gene names: 153947110
Gene position: 93730-94632 (Clockwise)
Preceding gene: 153950110
Following gene: 153948129
Centisome position: 1.98
GC content: 48.28
Gene sequence:
>903_bases ATGGATCCACAATATGCGCGTTGGGTTAAAGCCGCTGCGCTCAGTGCTACCGCATTAGCATCAATCTTACTGATCATTAA AATTTTTGCCTGGTGGCATACAGGTTCGGTGAGTTTGTTGGCGGCGTTAGTTGACTCTTTGGTGGATCTGGCAGCCTCTC TGACAAACTTATTTGTCGTGCGTTACTCTCTGCAACCTGCTGATGAAGAACATACTTTTGGTCATGGTAAGGCGGAGTCA TTGGCGGCTCTGGCCCAAAGTATGTTTATTTCCGGCTCCGCTTTATTTCTTTTCCTGACCGGTTTTCGGCATTTGGCCTC ACCGGAGCCATTGCAAGATCCTAGTATAGGCATCGGGGTAACGTTAGTCGCATTGTTCAGTACACTGATATTAGTCACAT TTCAGCGTTGGGTAGTACGAAAAACACACAGTCAGGTGATTCGTGCCGATATGTTGCACTATCAATCTGACGTCTTGATG AATGGTGCTATTCTTATTGCGTTGGCATTGAGTTGGTATGGTTTTCGCCGGGCGGATGCATTGTTCGCGTTGGGTATCGG TGTTTATATTCTTTATAGCGCGTTACGTATGGGCTATGAAGCGGTGCAGTCCTTGCTAGACCGTGCGCTGCCTGATGATG AGCGGCAGCAGATTATCGATATTGTGACGTCATGGCCGGGGGTGATCGGGGCACATGACTTACGTACCCGCCGGTCAGGG CAAACACGTTTTATTCAGCTCCATCTGGAGATGGAGGATATGATGCCGTTAATGGAGGCGCATGTGTTAGCTGAACAAGT TGAACATGCCTTACTGTACCGTTTCCCAGGGGCAGATGTGCTTATTCATCAAGACCCATGTTCTGTTGTCCCTAAAGAGC GTCATGCGCACTGGGAATTATAA
Upstream 100 bases:
>100_bases TGTGGTGAATCCAATTATACCGGCTCACCATGCCGCTCAATTAATAATCTCAAAAGATCAACAGACCCTAATAGCCCTTA AATATAATTTGGGATGAGTT
Downstream 100 bases:
>100_bases TTGCTTCACCAATAGCCGATATATTGTGATGACGTTTATGGTAAGGCAGTGAAAAATACCGCAAAATGGCTGACTTGAAT CAATTCAGCTTGGCGTTTTT
Product: ferrous iron efflux protein F
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MDPQYARWVKAAALSATALASILLIIKIFAWWHTGSVSLLAALVDSLVDLAASLTNLFVVRYSLQPADEEHTFGHGKAES LAALAQSMFISGSALFLFLTGFRHLASPEPLQDPSIGIGVTLVALFSTLILVTFQRWVVRKTHSQVIRADMLHYQSDVLM NGAILIALALSWYGFRRADALFALGIGVYILYSALRMGYEAVQSLLDRALPDDERQQIIDIVTSWPGVIGAHDLRTRRSG QTRFIQLHLEMEDMMPLMEAHVLAEQVEHALLYRFPGADVLIHQDPCSVVPKERHAHWEL
Sequences:
>Translated_300_residues MDPQYARWVKAAALSATALASILLIIKIFAWWHTGSVSLLAALVDSLVDLAASLTNLFVVRYSLQPADEEHTFGHGKAES LAALAQSMFISGSALFLFLTGFRHLASPEPLQDPSIGIGVTLVALFSTLILVTFQRWVVRKTHSQVIRADMLHYQSDVLM NGAILIALALSWYGFRRADALFALGIGVYILYSALRMGYEAVQSLLDRALPDDERQQIIDIVTSWPGVIGAHDLRTRRSG QTRFIQLHLEMEDMMPLMEAHVLAEQVEHALLYRFPGADVLIHQDPCSVVPKERHAHWEL >Mature_300_residues MDPQYARWVKAAALSATALASILLIIKIFAWWHTGSVSLLAALVDSLVDLAASLTNLFVVRYSLQPADEEHTFGHGKAES LAALAQSMFISGSALFLFLTGFRHLASPEPLQDPSIGIGVTLVALFSTLILVTFQRWVVRKTHSQVIRADMLHYQSDVLM NGAILIALALSWYGFRRADALFALGIGVYILYSALRMGYEAVQSLLDRALPDDERQQIIDIVTSWPGVIGAHDLRTRRSG QTRFIQLHLEMEDMMPLMEAHVLAEQVEHALLYRFPGADVLIHQDPCSVVPKERHAHWEL
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=293, Percent_Identity=78.1569965870307, Blast_Score=469, Evalue=1e-134,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 33424; Mature: 33424
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPQYARWVKAAALSATALASILLIIKIFAWWHTGSVSLLAALVDSLVDLAASLTNLFVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYSLQPADEEHTFGHGKAESLAALAQSMFISGSALFLFLTGFRHLASPEPLQDPSIGIGV EEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH TLVALFSTLILVTFQRWVVRKTHSQVIRADMLHYQSDVLMNGAILIALALSWYGFRRADA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFALGIGVYILYSALRMGYEAVQSLLDRALPDDERQQIIDIVTSWPGVIGAHDLRTRRSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCC QTRFIQLHLEMEDMMPLMEAHVLAEQVEHALLYRFPGADVLIHQDPCSVVPKERHAHWEL CEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MDPQYARWVKAAALSATALASILLIIKIFAWWHTGSVSLLAALVDSLVDLAASLTNLFVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYSLQPADEEHTFGHGKAESLAALAQSMFISGSALFLFLTGFRHLASPEPLQDPSIGIGV EEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH TLVALFSTLILVTFQRWVVRKTHSQVIRADMLHYQSDVLMNGAILIALALSWYGFRRADA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFALGIGVYILYSALRMGYEAVQSLLDRALPDDERQQIIDIVTSWPGVIGAHDLRTRRSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCC QTRFIQLHLEMEDMMPLMEAHVLAEQVEHALLYRFPGADVLIHQDPCSVVPKERHAHWEL CEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA