| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is mukE [H]
Identifier: 153947094
GI number: 153947094
Start: 2910527
End: 2911255
Strand: Reverse
Name: mukE [H]
Synonym: YpsIP31758_2566
Alternate gene names: 153947094
Gene position: 2911255-2910527 (Counterclockwise)
Preceding gene: 153947689
Following gene: 153947715
Centisome position: 61.64
GC content: 47.05
Gene sequence:
>729_bases ATGTCATCAACAAATATTGAAGTAGTAATGCCCGTTAAGCTGGCTCAGGCATTAGCCAACACATTATTTCCGGCATTAGA CAGCCAGTTACGTGCTGGCCGTCATATTGGTATTGATGAGTTGGATAATCATGCTTTTTTGATGGATTTTCAGGAGCAAC TGGAAGAATTTTACGCTCGCTATAATGTCGAGTTAATCCGTGCGCCGGAAGGTTTCTTCTATTTGCGTCCTCGTTCAACC ACGCTTATTCCGCGCTCAGTTTTATCTGAGTTGGATATGATGGTCGGCAAAATTCTCTGTTATCTCTACCTCAGCCCGGA ACGGCTGGCTCATGAAGGTATCTTCTCTCAGCAAGAGCTGTACGAAGAGTTACTGAGCCTGGCCGATGAGAGCAAATTGC TGAAGTTTGTTAACCAGCGCTCGACCGGGTCTGATTTGGATAAACAGAAGTTACAGGAAAAAGTCCGGACGTCACTTAAC CGGCTGCGTCGGTTGGGCATGATTTATTTTATGGGCAACGACAGCACCAAGTTTCGCATCACTGAAGCGGTATTCCGTTT TGGTGCGGATGTACGCAGCGGTGATGATCAACGTGAAGCCCAGCTACGCATGATCCGTGATGGCGAAGCCATGGCGGTAG AAAATAGTCTGTCACTTCATGATGAAAGTGATGATGCTGATGTCACCATGGGCAATGCAGCGGACAGTGTAGAGGATGAA CAGGAATGA
Upstream 100 bases:
>100_bases GTCGACCAGGCTGTTCGCCTCGGTGTGGCCGAAGCCGATTTCTCAGGGTTGCCAGCCGAATGGTTAGCAATCAATGATTA CGGAGCCAAGGTGCAGGCAC
Downstream 100 bases:
>100_bases TTGAACGCGGTAAATTTCGCTCACTGACCTTGGTTAACTGGAATGGTTTCTTTGCCCGAACATTCGATCTTGATGAGCTG GTAACAACCCTCTCCGGCGG
Product: condesin subunit E
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MSSTNIEVVMPVKLAQALANTLFPALDSQLRAGRHIGIDELDNHAFLMDFQEQLEEFYARYNVELIRAPEGFFYLRPRST TLIPRSVLSELDMMVGKILCYLYLSPERLAHEGIFSQQELYEELLSLADESKLLKFVNQRSTGSDLDKQKLQEKVRTSLN RLRRLGMIYFMGNDSTKFRITEAVFRFGADVRSGDDQREAQLRMIRDGEAMAVENSLSLHDESDDADVTMGNAADSVEDE QE
Sequences:
>Translated_242_residues MSSTNIEVVMPVKLAQALANTLFPALDSQLRAGRHIGIDELDNHAFLMDFQEQLEEFYARYNVELIRAPEGFFYLRPRST TLIPRSVLSELDMMVGKILCYLYLSPERLAHEGIFSQQELYEELLSLADESKLLKFVNQRSTGSDLDKQKLQEKVRTSLN RLRRLGMIYFMGNDSTKFRITEAVFRFGADVRSGDDQREAQLRMIRDGEAMAVENSLSLHDESDDADVTMGNAADSVEDE QE >Mature_241_residues SSTNIEVVMPVKLAQALANTLFPALDSQLRAGRHIGIDELDNHAFLMDFQEQLEEFYARYNVELIRAPEGFFYLRPRSTT LIPRSVLSELDMMVGKILCYLYLSPERLAHEGIFSQQELYEELLSLADESKLLKFVNQRSTGSDLDKQKLQEKVRTSLNR LRRLGMIYFMGNDSTKFRITEAVFRFGADVRSGDDQREAQLRMIRDGEAMAVENSLSLHDESDDADVTMGNAADSVEDEQ E
Specific function: Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interactio
COG id: COG3095
COG function: function code D; Uncharacterized protein involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Restricted to the nucleoid region (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mukE family [H]
Homologues:
Organism=Escherichia coli, GI226510932, Length=240, Percent_Identity=82.0833333333333, Blast_Score=405, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007385 [H]
Pfam domain/function: PF04288 MukE [H]
EC number: NA
Molecular weight: Translated: 27644; Mature: 27512
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTNIEVVMPVKLAQALANTLFPALDSQLRAGRHIGIDELDNHAFLMDFQEQLEEFYAR CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHH YNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLAHEGIFSQQEL CCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHH YEELLSLADESKLLKFVNQRSTGSDLDKQKLQEKVRTSLNRLRRLGMIYFMGNDSTKFRI HHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEHH TEAVFRFGADVRSGDDQREAQLRMIRDGEAMAVENSLSLHDESDDADVTMGNAADSVEDE HHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCC QE CC >Mature Secondary Structure SSTNIEVVMPVKLAQALANTLFPALDSQLRAGRHIGIDELDNHAFLMDFQEQLEEFYAR CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHH YNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLAHEGIFSQQEL CCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHH YEELLSLADESKLLKFVNQRSTGSDLDKQKLQEKVRTSLNRLRRLGMIYFMGNDSTKFRI HHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEHH TEAVFRFGADVRSGDDQREAQLRMIRDGEAMAVENSLSLHDESDDADVTMGNAADSVEDE HHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCC QE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]