| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yfjT [H]
Identifier: 153947070
GI number: 153947070
Start: 915243
End: 915710
Strand: Reverse
Name: yfjT [H]
Synonym: YpsIP31758_0755
Alternate gene names: 153947070
Gene position: 915710-915243 (Counterclockwise)
Preceding gene: 153948815
Following gene: 153947438
Centisome position: 19.39
GC content: 47.22
Gene sequence:
>468_bases ATGCGCTTATCTCACGTAATACTGATGGTATCAACTCTGGCGTCAGCAACAACTGCTCAGGCCATACCGAATATGTGGAC CAGTGGCTTCGGTCAGGGCGTGACAGAATACCGGATCACCAGTCCAGAAAATGTCATTTTCAACCTTAACTGCACCATGA ACCCGGATGAGCAGAATATTTTACAACATAATGTGCTCATTGGCCTGCCTGATGGTACTCGCGCAGATTCACGCGATGAC AAAACGGCAATCACGATTGTGACGGATGACCAACAGTTTCCTTTACCCTATTCACTGGGCTGGCGAAATGGGGATAACGC TTGGATTCAGTTTATTGACGCGCTTGGTCATGCCGCAACGTTCGATGTTTATATTAATGACAAAAAAGCAGGGAGTTTCA ACCCCGGCCTGAAAAATACGAAAAAAGAACTGAGCGACCTTAGCGGTTGCAGGAATACCGAGGGTTAG
Upstream 100 bases:
>100_bases TTATCAGCAATCGGGAAAAAGATATTGGGGGAGAAAATTGTTTTATTACCGATATGGCTCATTACTTGAAAATTTAATTT AAGGGTTTAAGGATAAAATC
Downstream 100 bases:
>100_bases CCTCTTTTCTCAATAGCCATATCATCATCTAACAGGCCATGCCTCCTTCGGGACGCATGGCCTTTTTGTTTTTAATCTCC CAATAAGGAATTAATAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MRLSHVILMVSTLASATTAQAIPNMWTSGFGQGVTEYRITSPENVIFNLNCTMNPDEQNILQHNVLIGLPDGTRADSRDD KTAITIVTDDQQFPLPYSLGWRNGDNAWIQFIDALGHAATFDVYINDKKAGSFNPGLKNTKKELSDLSGCRNTEG
Sequences:
>Translated_155_residues MRLSHVILMVSTLASATTAQAIPNMWTSGFGQGVTEYRITSPENVIFNLNCTMNPDEQNILQHNVLIGLPDGTRADSRDD KTAITIVTDDQQFPLPYSLGWRNGDNAWIQFIDALGHAATFDVYINDKKAGSFNPGLKNTKKELSDLSGCRNTEG >Mature_155_residues MRLSHVILMVSTLASATTAQAIPNMWTSGFGQGVTEYRITSPENVIFNLNCTMNPDEQNILQHNVLIGLPDGTRADSRDD KTAITIVTDDQQFPLPYSLGWRNGDNAWIQFIDALGHAATFDVYINDKKAGSFNPGLKNTKKELSDLSGCRNTEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ykfB [H]
Homologues:
Organism=Escherichia coli, GI1788990, Length=146, Percent_Identity=45.8904109589041, Blast_Score=152, Evalue=1e-38, Organism=Escherichia coli, GI1786444, Length=146, Percent_Identity=47.2602739726027, Blast_Score=151, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17047; Mature: 17047
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSHVILMVSTLASATTAQAIPNMWTSGFGQGVTEYRITSPENVIFNLNCTMNPDEQNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCHHHH LQHNVLIGLPDGTRADSRDDKTAITIVTDDQQFPLPYSLGWRNGDNAWIQFIDALGHAAT HHCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCHHHHHHHHHHCCCEE FDVYINDKKAGSFNPGLKNTKKELSDLSGCRNTEG EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRLSHVILMVSTLASATTAQAIPNMWTSGFGQGVTEYRITSPENVIFNLNCTMNPDEQNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCHHHH LQHNVLIGLPDGTRADSRDDKTAITIVTDDQQFPLPYSLGWRNGDNAWIQFIDALGHAAT HHCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCHHHHHHHHHHCCCEE FDVYINDKKAGSFNPGLKNTKKELSDLSGCRNTEG EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 1849680 [H]