Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

Click here to switch to the map view.

The map label for this gene is hslJ [H]

Identifier: 153946972

GI number: 153946972

Start: 2087692

End: 2088144

Strand: Reverse

Name: hslJ [H]

Synonym: YpsIP31758_1807

Alternate gene names: 153946972

Gene position: 2088144-2087692 (Counterclockwise)

Preceding gene: 153947549

Following gene: 153949404

Centisome position: 44.21

GC content: 43.93

Gene sequence:

>453_bases
ATGAGAAAGTTCGTTCCAGTGGCTATTATCGGTGTACTTCTGGCAGGATGCAGCGGTATGAATCAGTCTGGGAATAATAT
GAACCCTGTGGCAAACAGTAGCCATGTGACCGAAAGTGACCTGTTACACCATAATTTTGTCTTGGTCAGCGTTGATGGTA
AGCCACCGGTTAAAACACCTGAACCCAATATTGAGTTTGGTGAAAATATGCATATTTCAGGTGCGATGTGTAATCGATTT
ATGGGCCAAGGTGAATTAAAAGACGGCATATTGACGGCTAAGGGGCTGGCGAGTACCCGTATGCTATGCGCTGATGAACA
ACTCAATCAATGGGACGCACTGATTGGCGATATATTACACAGCGGCGTGAAAGTGACCTTAAATAAAGGGCAATTGACGA
TGAGTAATAGTACGCACACCTTAGTTTACCAACAGAAAGATTGGGTTAACTGA

Upstream 100 bases:

>100_bases
CGAACCCTGCCCAAATATCATCACCCTCTGATGCATTAACATCCAATAGCGGATAGCGAGTGAACATTCTCCCTATCCGT
TATGATGAGTAGGAGATAAT

Downstream 100 bases:

>100_bases
TGCTCATTGATGCATAACCTCTTATTTAGGCGGCAGTTTTCCGATAGCTGCTGCCAATTAACGCACCGGGCATGCACCGC
GCAACAACGCTTCCTCGTCA

Product: heat-inducible protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MRKFVPVAIIGVLLAGCSGMNQSGNNMNPVANSSHVTESDLLHHNFVLVSVDGKPPVKTPEPNIEFGENMHISGAMCNRF
MGQGELKDGILTAKGLASTRMLCADEQLNQWDALIGDILHSGVKVTLNKGQLTMSNSTHTLVYQQKDWVN

Sequences:

>Translated_150_residues
MRKFVPVAIIGVLLAGCSGMNQSGNNMNPVANSSHVTESDLLHHNFVLVSVDGKPPVKTPEPNIEFGENMHISGAMCNRF
MGQGELKDGILTAKGLASTRMLCADEQLNQWDALIGDILHSGVKVTLNKGQLTMSNSTHTLVYQQKDWVN
>Mature_150_residues
MRKFVPVAIIGVLLAGCSGMNQSGNNMNPVANSSHVTESDLLHHNFVLVSVDGKPPVKTPEPNIEFGENMHISGAMCNRF
MGQGELKDGILTAKGLASTRMLCADEQLNQWDALIGDILHSGVKVTLNKGQLTMSNSTHTLVYQQKDWVN

Specific function: Unknown

COG id: COG3187

COG function: function code O; Heat shock protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787644, Length=153, Percent_Identity=45.7516339869281, Blast_Score=127, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005184 [H]

Pfam domain/function: PF03724 META [H]

EC number: NA

Molecular weight: Translated: 16274; Mature: 16274

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFVPVAIIGVLLAGCSGMNQSGNNMNPVANSSHVTESDLLHHNFVLVSVDGKPPVKTP
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCC
EPNIEFGENMHISGAMCNRFMGQGELKDGILTAKGLASTRMLCADEQLNQWDALIGDILH
CCCCCCCCCEEECHHHHHHHCCCCCCCCCEEECCCCCHHHEECCCHHHHHHHHHHHHHHH
SGVKVTLNKGQLTMSNSTHTLVYQQKDWVN
CCEEEEEECCEEEECCCCEEEEEECCCCCC
>Mature Secondary Structure
MRKFVPVAIIGVLLAGCSGMNQSGNNMNPVANSSHVTESDLLHHNFVLVSVDGKPPVKTP
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCC
EPNIEFGENMHISGAMCNRFMGQGELKDGILTAKGLASTRMLCADEQLNQWDALIGDILH
CCCCCCCCCEEECHHHHHHHCCCCCCCCCEEECCCCCHHHEECCCHHHHHHHHHHHHHHH
SGVKVTLNKGQLTMSNSTHTLVYQQKDWVN
CCEEEEEECCEEEECCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9025293; 9097039; 9278503; 8349564 [H]