| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153946957
Identifier: 153946957
GI number: 153946957
Start: 697661
End: 699217
Strand: Reverse
Name: 153946957
Synonym: YpsIP31758_0593
Alternate gene names: NA
Gene position: 699217-697661 (Counterclockwise)
Preceding gene: 153948500
Following gene: 153949824
Centisome position: 14.8
GC content: 35.0
Gene sequence:
>1557_bases ATGCAGAAAAAAACAATGATAACTTTCATACTAGAGAAGTATGAGTTTTTTATTAAAAATAGACAGGGAGCCATTCTATT GTCTTTTATGGCGTTAATCCCTGTTTTTATTGGGTTGATATTTTTGTCTTTTGAATTTTCTCACTTTATCCAAAAGAGAG CTAAACTCTCTGATGCTATTGAACAAGCATCTTTAGCCTTATCGACAGAAAATAATTATAGGAATGATAGAGCCAGTAAT AATAGAAACAATTATCTGGTTACATCGTACGCACAATCTTATTTACCGTCAGAGCGTTTTTCGCAACCAAGGGTAGTCAA TACCTACAATGAGATTTTAGGTTACACTGAATATAATGCCAGTCTACAGATGAATTATCAGTTAGCATTATTAAACTCTT ACTTAAAACAAACCCCCTCGCCGACGTGGGATGTTAACGAAAATGGGGCCGCCAGAAAGTATTTATCATCAATAGCCGAA CCTATAGATGTCGTTTTTGTCACCGACTTTTCTGGATCGATGAATTTACCTTTCGGGGATATTGAGCTAAATAACAGAAT AACTAAACTTGATGAGCTAAAAGCGATTTTTGTAAAATTAAATAACCGAATATTTTCAAACGATGGCATTAACACCATTG GATTTGTTCCCTTCTCATGGGGTACAAAAAGAATATCTGCCAATGGACAGGTATCATCTACTTATTGCCACTTTCCCTAT TCTCCTAAAAAAATAGATGGAAATGGTCATTATCTCCAACGTTATACCGCCTCAAACTTAAAGAATATTCCTGGTTTGGA CAATCTCAGTGGGATAGATAATCTCGCTTACGGTCAATTAGATGAAGATAAACACCACGCTATCCTTAGCGAAATAGAAA AAAAACATAGAGACAATGAAATACCTACTAAAACCAGAGATCAGGCTAAAAATTTTCTTGATAAGGCATATAAAGTAAAT CAAATTTCGACTATCACTAAAATTGTGGAAGAACATATTGATTATAAAGAAACAATAAACTCAATTGACCGAAATGGTGA AACGATTGATATACCAATGGATGACATATTAGATCCATTTTTCTGTCTAAAAGAGACCAACGCAAAATCACTTAACTTTG ATCCTAATTCAAAAGGAGATATAAACGAAATCCTCAATATGAAGGCTGAAGGGGGAACATTAGCCAGCTCAGGAATATTG GTGGGTAACAAAATGCTCACTGAAAGCCAAAATAACAATAAACTGATGATTATCCTGTCTGATGGTGATGATAATACGCA AAAAATGAGTTCTCCACACGATCAGAAAGCGGGCATCATCAATATCACGCAAAAATTGATTACTGAAGGTATGTGTCAGA AAATTAAAGATAATGGCATAAAAATGGTTTTTATCGGGATTGGCTACGTTCCCGATAATAATATTATCGATTGGGAAAAA GACTGTGTAGGGACGGGTAATTTTTATCTGGCAAAAAATGCCCACGAATTAGAAATTAGTATCGAGCGAGCACTGGTTGT TGATGATGAAGTGGGGAGAAATATCCCTAAAAGCTGA
Upstream 100 bases:
>100_bases TCAGAGATACCGTGACCTGATTAGTGTCAGCCCCTTGCCAACATTGAAATCATCGGCCATCACAATCGGGCGCTAAACAG CCTACGAATAAAGGTTATAT
Downstream 100 bases:
>100_bases AATTGACTTAAAAATCGATATTGACCTAAAAACTGAAATTTCCTCAAAAACCAAAGTTGATGCAAGCGCGGTAACAGTAA CCGCGCTTGCAAAAAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Tight Adherance Operon Protein G; Tight Adherance Operon Protein
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MQKKTMITFILEKYEFFIKNRQGAILLSFMALIPVFIGLIFLSFEFSHFIQKRAKLSDAIEQASLALSTENNYRNDRASN NRNNYLVTSYAQSYLPSERFSQPRVVNTYNEILGYTEYNASLQMNYQLALLNSYLKQTPSPTWDVNENGAARKYLSSIAE PIDVVFVTDFSGSMNLPFGDIELNNRITKLDELKAIFVKLNNRIFSNDGINTIGFVPFSWGTKRISANGQVSSTYCHFPY SPKKIDGNGHYLQRYTASNLKNIPGLDNLSGIDNLAYGQLDEDKHHAILSEIEKKHRDNEIPTKTRDQAKNFLDKAYKVN QISTITKIVEEHIDYKETINSIDRNGETIDIPMDDILDPFFCLKETNAKSLNFDPNSKGDINEILNMKAEGGTLASSGIL VGNKMLTESQNNNKLMIILSDGDDNTQKMSSPHDQKAGIINITQKLITEGMCQKIKDNGIKMVFIGIGYVPDNNIIDWEK DCVGTGNFYLAKNAHELEISIERALVVDDEVGRNIPKS
Sequences:
>Translated_518_residues MQKKTMITFILEKYEFFIKNRQGAILLSFMALIPVFIGLIFLSFEFSHFIQKRAKLSDAIEQASLALSTENNYRNDRASN NRNNYLVTSYAQSYLPSERFSQPRVVNTYNEILGYTEYNASLQMNYQLALLNSYLKQTPSPTWDVNENGAARKYLSSIAE PIDVVFVTDFSGSMNLPFGDIELNNRITKLDELKAIFVKLNNRIFSNDGINTIGFVPFSWGTKRISANGQVSSTYCHFPY SPKKIDGNGHYLQRYTASNLKNIPGLDNLSGIDNLAYGQLDEDKHHAILSEIEKKHRDNEIPTKTRDQAKNFLDKAYKVN QISTITKIVEEHIDYKETINSIDRNGETIDIPMDDILDPFFCLKETNAKSLNFDPNSKGDINEILNMKAEGGTLASSGIL VGNKMLTESQNNNKLMIILSDGDDNTQKMSSPHDQKAGIINITQKLITEGMCQKIKDNGIKMVFIGIGYVPDNNIIDWEK DCVGTGNFYLAKNAHELEISIERALVVDDEVGRNIPKS >Mature_518_residues MQKKTMITFILEKYEFFIKNRQGAILLSFMALIPVFIGLIFLSFEFSHFIQKRAKLSDAIEQASLALSTENNYRNDRASN NRNNYLVTSYAQSYLPSERFSQPRVVNTYNEILGYTEYNASLQMNYQLALLNSYLKQTPSPTWDVNENGAARKYLSSIAE PIDVVFVTDFSGSMNLPFGDIELNNRITKLDELKAIFVKLNNRIFSNDGINTIGFVPFSWGTKRISANGQVSSTYCHFPY SPKKIDGNGHYLQRYTASNLKNIPGLDNLSGIDNLAYGQLDEDKHHAILSEIEKKHRDNEIPTKTRDQAKNFLDKAYKVN QISTITKIVEEHIDYKETINSIDRNGETIDIPMDDILDPFFCLKETNAKSLNFDPNSKGDINEILNMKAEGGTLASSGIL VGNKMLTESQNNNKLMIILSDGDDNTQKMSSPHDQKAGIINITQKLITEGMCQKIKDNGIKMVFIGIGYVPDNNIIDWEK DCVGTGNFYLAKNAHELEISIERALVVDDEVGRNIPKS
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58525; Mature: 58525
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKTMITFILEKYEFFIKNRQGAILLSFMALIPVFIGLIFLSFEFSHFIQKRAKLSDAI CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQASLALSTENNYRNDRASNNRNNYLVTSYAQSYLPSERFSQPRVVNTYNEILGYTEYNA HHHHEEEECCCCCCCCCCCCCCCCEEEEHHHHHHCCHHHCCCCCEEHHHHHHHCEEECCC SLQMNYQLALLNSYLKQTPSPTWDVNENGAARKYLSSIAEPIDVVFVTDFSGSMNLPFGD EEEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC IELNNRITKLDELKAIFVKLNNRIFSNDGINTIGFVPFSWGTKRISANGQVSSTYCHFPY EEECCCHHHHHHHHHHHHHHCCEEECCCCCCEEEEEEECCCCEEEECCCCCCCEEEECCC SPKKIDGNGHYLQRYTASNLKNIPGLDNLSGIDNLAYGQLDEDKHHAILSEIEKKHRDNE CCCEECCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC IPTKTRDQAKNFLDKAYKVNQISTITKIVEEHIDYKETINSIDRNGETIDIPMDDILDPF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCHHHHCCHH FCLKETNAKSLNFDPNSKGDINEILNMKAEGGTLASSGILVGNKMLTESQNNNKLMIILS HHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCEEECCHHEECCCCCCEEEEEEE DGDDNTQKMSSPHDQKAGIINITQKLITEGMCQKIKDNGIKMVFIGIGYVPDNNIIDWEK CCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCC DCVGTGNFYLAKNAHELEISIERALVVDDEVGRNIPKS CCCCCCCEEEECCCEEEEEEEEEEEEEEHHHCCCCCCC >Mature Secondary Structure MQKKTMITFILEKYEFFIKNRQGAILLSFMALIPVFIGLIFLSFEFSHFIQKRAKLSDAI CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQASLALSTENNYRNDRASNNRNNYLVTSYAQSYLPSERFSQPRVVNTYNEILGYTEYNA HHHHEEEECCCCCCCCCCCCCCCCEEEEHHHHHHCCHHHCCCCCEEHHHHHHHCEEECCC SLQMNYQLALLNSYLKQTPSPTWDVNENGAARKYLSSIAEPIDVVFVTDFSGSMNLPFGD EEEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC IELNNRITKLDELKAIFVKLNNRIFSNDGINTIGFVPFSWGTKRISANGQVSSTYCHFPY EEECCCHHHHHHHHHHHHHHCCEEECCCCCCEEEEEEECCCCEEEECCCCCCCEEEECCC SPKKIDGNGHYLQRYTASNLKNIPGLDNLSGIDNLAYGQLDEDKHHAILSEIEKKHRDNE CCCEECCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC IPTKTRDQAKNFLDKAYKVNQISTITKIVEEHIDYKETINSIDRNGETIDIPMDDILDPF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCHHHHCCHH FCLKETNAKSLNFDPNSKGDINEILNMKAEGGTLASSGILVGNKMLTESQNNNKLMIILS HHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCEEECCHHEECCCCCCEEEEEEE DGDDNTQKMSSPHDQKAGIINITQKLITEGMCQKIKDNGIKMVFIGIGYVPDNNIIDWEK CCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCC DCVGTGNFYLAKNAHELEISIERALVVDDEVGRNIPKS CCCCCCCEEEECCCEEEEEEEEEEEEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA