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The map label for this gene is flgF [H]

Identifier: 153946948

GI number: 153946948

Start: 751278

End: 752009

Strand: Direct

Name: flgF [H]

Synonym: YpsIP31758_0643

Alternate gene names: 153946948

Gene position: 751278-752009 (Clockwise)

Preceding gene: 153948570

Following gene: 153947407

Centisome position: 15.91

GC content: 53.42

Gene sequence:

>732_bases
ATGGATAAGCTTCTGTATACCGCGGTTAGCGGGGCTAATCGCAGCCTGTCACAACAACAGATCCATGCCAATAATCTGGC
GAACACCAATACGCAGGGGTTCCGGGCAGATCTGGAAAAGGCCACCGCGACTCAGGTAATGGGCAGTGGCTATAACAGCC
GTGTCGCGGTACTGAGCCAAAATGCTGGGGTGGATATGACCCCTGCGAGTTTGCAAGAGACCGGCCGTGATCTGGATATT
GCCGTTAAAAATCAGGGGCTGATCGCAGTACTCAGTGGTGGCCGTGAAGTCTATACCCGCAATGGTCAGATGGAGGTTAG
CGCCGACGGTGATTTAACTATCAATGGTTTACCGGTATTGGGAGATGGCGGCCCGATCGTGCTCCCTCCTTACTCGGCAT
TATCGATAGCCGATGATGGCACGATAGCGATCATCCCGCAGGCGGGGGGCATTAAAACCCCAGAGGAGATTGAACGCATC
AAACTGGTGGATATTCCTGCCAATCAACTCAGAAAAAATAACCGCGGTTTACTGGTCAGTAACCGTGGCCCGGCGGCCCG
TGATGAAGCGGTGCAAGTGGTGAATAAACACCTGGAAAGCAGCAACGTTTCTGCCATTAGCGAAATGATCGCCAGTATCT
CCCTCAGCCGCCAGTTTGAGGCGCAAATCAAAATGATGAAAGTCGCAGAGGATCTGGCGCAAGCGGGCAACCGGATGATC
CGGGGCAGTTAA

Upstream 100 bases:

>100_bases
AACTGGTAGGGCTGATGACCGCCCAGCGTAACTATCAGGCCAGCACCAAAATCATCAGCACCAATGACAGCATGATGAAT
GCGCTGTTCCAGGTGCTGTA

Downstream 100 bases:

>100_bases
TGGCGATGGTGCGGTGAGGCCTCAATCTGCGCCACTTGCTCAATATGGAAATTAAGGAATAACAGTTATGAATTCTGCTT
TATGGGTCAGTAAAACCGGT

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MDKLLYTAVSGANRSLSQQQIHANNLANTNTQGFRADLEKATATQVMGSGYNSRVAVLSQNAGVDMTPASLQETGRDLDI
AVKNQGLIAVLSGGREVYTRNGQMEVSADGDLTINGLPVLGDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERI
KLVDIPANQLRKNNRGLLVSNRGPAARDEAVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMI
RGS

Sequences:

>Translated_243_residues
MDKLLYTAVSGANRSLSQQQIHANNLANTNTQGFRADLEKATATQVMGSGYNSRVAVLSQNAGVDMTPASLQETGRDLDI
AVKNQGLIAVLSGGREVYTRNGQMEVSADGDLTINGLPVLGDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERI
KLVDIPANQLRKNNRGLLVSNRGPAARDEAVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMI
RGS
>Mature_243_residues
MDKLLYTAVSGANRSLSQQQIHANNLANTNTQGFRADLEKATATQVMGSGYNSRVAVLSQNAGVDMTPASLQETGRDLDI
AVKNQGLIAVLSGGREVYTRNGQMEVSADGDLTINGLPVLGDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERI
KLVDIPANQLRKNNRGLLVSNRGPAARDEAVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMI
RGS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=248, Percent_Identity=36.6935483870968, Blast_Score=156, Evalue=1e-39,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25750; Mature: 25750

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLLYTAVSGANRSLSQQQIHANNLANTNTQGFRADLEKATATQVMGSGYNSRVAVLSQ
CCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEC
NAGVDMTPASLQETGRDLDIAVKNQGLIAVLSGGREVYTRNGQMEVSADGDLTINGLPVL
CCCCCCCCHHHHHCCCCEEEEEECCCEEEEEECCEEEEEECCEEEEECCCCEEECCEEEE
GDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERIKLVDIPANQLRKNNRGLLVS
CCCCCEEECCCCEEEECCCCEEEEEECCCCCCCHHHHCEEEEEECCHHHHHCCCCCEEEE
NRGPAARDEAVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMI
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
RGS
CCC
>Mature Secondary Structure
MDKLLYTAVSGANRSLSQQQIHANNLANTNTQGFRADLEKATATQVMGSGYNSRVAVLSQ
CCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEC
NAGVDMTPASLQETGRDLDIAVKNQGLIAVLSGGREVYTRNGQMEVSADGDLTINGLPVL
CCCCCCCCHHHHHCCCCEEEEEECCCEEEEEECCEEEEEECCEEEEECCCCEEECCEEEE
GDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERIKLVDIPANQLRKNNRGLLVS
CCCCCEEECCCCEEEECCCCEEEEEECCCCCCCHHHHCEEEEEECCHHHHHCCCCCEEEE
NRGPAARDEAVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMI
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
RGS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]