| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is plsB [H]
Identifier: 153946857
GI number: 153946857
Start: 4249907
End: 4252384
Strand: Direct
Name: plsB [H]
Synonym: YpsIP31758_3772
Alternate gene names: 153946857
Gene position: 4249907-4252384 (Clockwise)
Preceding gene: 153947273
Following gene: 153949827
Centisome position: 89.98
GC content: 49.96
Gene sequence:
>2478_bases ATGTCAGGTTGGCGTAAAATATATTATAAGTTACTGAATTTACCACTCAAATTGTTGGTAAAAAGCAAGGTTATCCCTGC AGATCCGGTCTCTGAGCTAGGGCTAGACCCTTCTCGTCCTATTCTGTACGTTTTACCTTACAATTCTAAGGCTGATTTGC TGACGTTACGGGCACAGTGCTTGGCGCAAGATCTGCCCGATCCATTGATTCCATTGGAAATCGATGGCGTGCAATTGCCC AGCCATGTGTTTATCGAGAACGGGCCAAGAGTCTTTCGCTACTATGTTCCTAAACAAGAATCGGTGAAGCTATTCCACGA TTATCTGGATTTACATCGTAATAATCCGGCGCTAGATATTCAGATGTTACCCGTTTCCGTGATGTTTGGCCGTTCCCCTG GGCGCGAAGGCCACGGTACGCCACATCTGCGGGTACTTAACGGTGTACAGAAATTCTTTGCTGTATTGTGGTTGGGGCGC GACAGTTTTGTGCGTTTTTCTACCACCGTATCGCTACGCCGAATGGCCAGTGAGCACGGTACCGATAAAACTATCGCCCA TAAACTGGCACGTGTGGCGCGGATGCACTTCTCTCGTCAACGTTTGGCCGCGGTAGGTCCGAGTTTACCTGCCCGTCAGG ATCTGTTTAAAAAACTCTTGGCCTCTAAGGCTATCGAGAAAGCTGTCGCTGACGAGGCGCGGTCGAAAAAAATCTCCCAT GAAAAAGCACAGCAAAACGCCATCACTCTGATGGAAGAGATTGCGGCTAATTTCTCCTATGAAGCCGTGCGGTTGTCTGA TCGGGTACTTAGCTGGACGTGGAACCGTTTGTATCAGGGGATTAACGTTCATAATGCAGAGCGGGTCCGGCAATTGGCAC AAGATGGCCATGAGATCGTCTATGTACCTTGTCATCGCAGCCATATGGATTACCTGCTGCTCTCCTATGTGCTCTACCAT CAGGGGCTGGTCCCACCGCATATCGCCGCAGGGATTAACCTCAACTTCTGGCCTGCCGGGCCAATCTTCCGCCGTTTAGG CGCATTCTTTATCCGCCGTACCTTTAAAGGCAATAAACTCTACTCAACGGTGTTCCGCGAATATCTGGGTGAGCTATTTA CTCGTGGCTATTCCGTTGAATACTTTGTTGAAGGGGGGCGTTCGCGGACTGGCCGCCTGTTGGAGCCGAAAACCGGCACC TTGTCGATGACGATTCAGGCCATGTTACGTGGTGGCACCCGCCCTATCACGTTGGTGCCGATTTACATCGGCTACGAGCA TGTTATGGAAGTGGGGACTTACGCCAAAGAGTTGCGCGGTGCGATAAAAGAAAAAGAGAACCTGTTACAGATGCTACGTG GCTTACGTAAGTTGCGTAATCTCGGCCAGGGCTATGTGAACTTTGGCGAACCCCTGCCATTGACGACCTACCTTAATACC CATGTGCCACAGTGGCGGGATGCCATCGATCCCATTGAAGCACAGCGCCCAAGTTGGCTAACACCGGCAGTGAATGATTT GGCTAATCAGATTATGGTCCGAATCAACAATGCGGCAGCAGCAAATGCCATGAATCTCTGTTCAACGGCGTTACTCGCCT CACGTCAGCGTTCACTAACCCGTGAGCAGCTACTTGAGCAACTTGATTGCTATCTGCAATTAATGCGCAATGCACCCTAT GCAAAAGATACTACCGTGCCGGATAAAACACCGGAAGAGTTGCTTAATCACGCCTTGAATATGAATAAGTTTGAGGTGGA GAAAGACACCATCGGTGACATCATCATCCTGCCACGGGAACAGGCCGTGCTGATGACCTATTATCGCAATAATATTCAGC ACTTACTGATATTGCCATCGCTGATTGCCAGTATGGTCATGTACCACCGCCGGATTACCCGGACGGAGTTACTGCACAAA ATCAGCATGATCTATCCAATGCTAAAAGCTGAACTGTTCCTGCATTACAGCAAAGAGCAGCTACCAGAGACTCTGGATAC ATTGATCGATGAGCTGGCTCGTCAGCAGTTAATTTGTGATAAAGGCAGCGAATTGGTCCTGAATCCGGCACGCATTCGCC CACTGCAATTGCTGGCCGCAGGTGTGCGGGAAACGCTACAACGCTACGCGATCACACTTTCACTCCTCAGCGCTACCCCC AGTATCAACCGTGGGGCATTGGAGAAAGAGAGCCGCATTATGGCGCAGCGCTTGTCGGTTCTGCATGGTATTAATGCGCC GGAATTCTTTGATAAAGCGGTCTTCTCAACGCTGGTTGCGACCTTGCGTGAAGAAGGCTATATCAGTGATAGCGGTGATG CCATTCAGGAACATACGCTGGAAGTTTACAATATGCTGAGTGCGTTGATGACCCCAGAAGTAAAGCTGACTATCGAAAGT GTCAGTATGCCAGCGGAGACCAGCAATCAGCCAGAAGCTCCAGAGACACCAGAGCCTGAGGGTAAAACGGAATCCTAA
Upstream 100 bases:
>100_bases TCGTGATTTTTGCCATTTTCTGTTGTCTCATCTCCACAGATCTCAAAACCAGTTTCTGGTATCCTTGCGACGAATTGCTA ACAAGAGGCTCCAAGTCGTT
Downstream 100 bases:
>100_bases TGTCTTAGCGTACTCAATGCTTAACAGCCCCCTGCCTAGCAGGGGGTTTTCTGAATACCATAACAATGGCCGGACTCATT ATCCGGCCATTTTTTACCAT
Product: glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: GPAT [H]
Number of amino acids: Translated: 825; Mature: 824
Protein sequence:
>825_residues MSGWRKIYYKLLNLPLKLLVKSKVIPADPVSELGLDPSRPILYVLPYNSKADLLTLRAQCLAQDLPDPLIPLEIDGVQLP SHVFIENGPRVFRYYVPKQESVKLFHDYLDLHRNNPALDIQMLPVSVMFGRSPGREGHGTPHLRVLNGVQKFFAVLWLGR DSFVRFSTTVSLRRMASEHGTDKTIAHKLARVARMHFSRQRLAAVGPSLPARQDLFKKLLASKAIEKAVADEARSKKISH EKAQQNAITLMEEIAANFSYEAVRLSDRVLSWTWNRLYQGINVHNAERVRQLAQDGHEIVYVPCHRSHMDYLLLSYVLYH QGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFTRGYSVEYFVEGGRSRTGRLLEPKTGT LSMTIQAMLRGGTRPITLVPIYIGYEHVMEVGTYAKELRGAIKEKENLLQMLRGLRKLRNLGQGYVNFGEPLPLTTYLNT HVPQWRDAIDPIEAQRPSWLTPAVNDLANQIMVRINNAAAANAMNLCSTALLASRQRSLTREQLLEQLDCYLQLMRNAPY AKDTTVPDKTPEELLNHALNMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIQHLLILPSLIASMVMYHRRITRTELLHK ISMIYPMLKAELFLHYSKEQLPETLDTLIDELARQQLICDKGSELVLNPARIRPLQLLAAGVRETLQRYAITLSLLSATP SINRGALEKESRIMAQRLSVLHGINAPEFFDKAVFSTLVATLREEGYISDSGDAIQEHTLEVYNMLSALMTPEVKLTIES VSMPAETSNQPEAPETPEPEGKTES
Sequences:
>Translated_825_residues MSGWRKIYYKLLNLPLKLLVKSKVIPADPVSELGLDPSRPILYVLPYNSKADLLTLRAQCLAQDLPDPLIPLEIDGVQLP SHVFIENGPRVFRYYVPKQESVKLFHDYLDLHRNNPALDIQMLPVSVMFGRSPGREGHGTPHLRVLNGVQKFFAVLWLGR DSFVRFSTTVSLRRMASEHGTDKTIAHKLARVARMHFSRQRLAAVGPSLPARQDLFKKLLASKAIEKAVADEARSKKISH EKAQQNAITLMEEIAANFSYEAVRLSDRVLSWTWNRLYQGINVHNAERVRQLAQDGHEIVYVPCHRSHMDYLLLSYVLYH QGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFTRGYSVEYFVEGGRSRTGRLLEPKTGT LSMTIQAMLRGGTRPITLVPIYIGYEHVMEVGTYAKELRGAIKEKENLLQMLRGLRKLRNLGQGYVNFGEPLPLTTYLNT HVPQWRDAIDPIEAQRPSWLTPAVNDLANQIMVRINNAAAANAMNLCSTALLASRQRSLTREQLLEQLDCYLQLMRNAPY AKDTTVPDKTPEELLNHALNMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIQHLLILPSLIASMVMYHRRITRTELLHK ISMIYPMLKAELFLHYSKEQLPETLDTLIDELARQQLICDKGSELVLNPARIRPLQLLAAGVRETLQRYAITLSLLSATP SINRGALEKESRIMAQRLSVLHGINAPEFFDKAVFSTLVATLREEGYISDSGDAIQEHTLEVYNMLSALMTPEVKLTIES VSMPAETSNQPEAPETPEPEGKTES >Mature_824_residues SGWRKIYYKLLNLPLKLLVKSKVIPADPVSELGLDPSRPILYVLPYNSKADLLTLRAQCLAQDLPDPLIPLEIDGVQLPS HVFIENGPRVFRYYVPKQESVKLFHDYLDLHRNNPALDIQMLPVSVMFGRSPGREGHGTPHLRVLNGVQKFFAVLWLGRD SFVRFSTTVSLRRMASEHGTDKTIAHKLARVARMHFSRQRLAAVGPSLPARQDLFKKLLASKAIEKAVADEARSKKISHE KAQQNAITLMEEIAANFSYEAVRLSDRVLSWTWNRLYQGINVHNAERVRQLAQDGHEIVYVPCHRSHMDYLLLSYVLYHQ GLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFTRGYSVEYFVEGGRSRTGRLLEPKTGTL SMTIQAMLRGGTRPITLVPIYIGYEHVMEVGTYAKELRGAIKEKENLLQMLRGLRKLRNLGQGYVNFGEPLPLTTYLNTH VPQWRDAIDPIEAQRPSWLTPAVNDLANQIMVRINNAAAANAMNLCSTALLASRQRSLTREQLLEQLDCYLQLMRNAPYA KDTTVPDKTPEELLNHALNMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIQHLLILPSLIASMVMYHRRITRTELLHKI SMIYPMLKAELFLHYSKEQLPETLDTLIDELARQQLICDKGSELVLNPARIRPLQLLAAGVRETLQRYAITLSLLSATPS INRGALEKESRIMAQRLSVLHGINAPEFFDKAVFSTLVATLREEGYISDSGDAIQEHTLEVYNMLSALMTPEVKLTIESV SMPAETSNQPEAPETPEPEGKTES
Specific function: De novo phospholipid biosynthesis; first step. [C]
COG id: COG2937
COG function: function code I; Glycerol-3-phosphate O-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPAT/DAPAT family [H]
Homologues:
Organism=Homo sapiens, GI7657134, Length=442, Percent_Identity=28.5067873303167, Blast_Score=154, Evalue=4e-37, Organism=Homo sapiens, GI190358539, Length=466, Percent_Identity=24.4635193133047, Blast_Score=132, Evalue=1e-30, Organism=Escherichia coli, GI87082362, Length=803, Percent_Identity=80.1992528019925, Blast_Score=1323, Evalue=0.0, Organism=Caenorhabditis elegans, GI71988723, Length=276, Percent_Identity=32.9710144927536, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI25147672, Length=295, Percent_Identity=30.5084745762712, Blast_Score=144, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71988728, Length=192, Percent_Identity=38.0208333333333, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI17864692, Length=340, Percent_Identity=27.9411764705882, Blast_Score=145, Evalue=1e-34, Organism=Drosophila melanogaster, GI24650754, Length=406, Percent_Identity=26.8472906403941, Blast_Score=135, Evalue=1e-31, Organism=Drosophila melanogaster, GI21357731, Length=405, Percent_Identity=26.9135802469136, Blast_Score=135, Evalue=2e-31, Organism=Drosophila melanogaster, GI24650752, Length=502, Percent_Identity=25.0996015936255, Blast_Score=135, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR022284 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.15 [H]
Molecular weight: Translated: 93623; Mature: 93492
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGWRKIYYKLLNLPLKLLVKSKVIPADPVSELGLDPSRPILYVLPYNSKADLLTLRAQC CCHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEECCCCCCHHHHHHHHH LAQDLPDPLIPLEIDGVQLPSHVFIENGPRVFRYYVPKQESVKLFHDYLDLHRNNPALDI HHHHCCCCCCEEEECCEECCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEE QMLPVSVMFGRSPGREGHGTPHLRVLNGVQKFFAVLWLGRDSFVRFSTTVSLRRMASEHG EEECEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCC TDKTIAHKLARVARMHFSRQRLAAVGPSLPARQDLFKKLLASKAIEKAVADEARSKKISH CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKAQQNAITLMEEIAANFSYEAVRLSDRVLSWTWNRLYQGINVHNAERVRQLAQDGHEIV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEE YVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKL EECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH YSTVFREYLGELFTRGYSVEYFVEGGRSRTGRLLEPKTGTLSMTIQAMLRGGTRPITLVP HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCCHHHHHHHHHCCCCCCEEEEE IYIGYEHVMEVGTYAKELRGAIKEKENLLQMLRGLRKLRNLGQGYVNFGEPLPLTTYLNT EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHCC HVPQWRDAIDPIEAQRPSWLTPAVNDLANQIMVRINNAAAANAMNLCSTALLASRQRSLT CCCCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH REQLLEQLDCYLQLMRNAPYAKDTTVPDKTPEELLNHALNMNKFEVEKDTIGDIIILPRE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEEEECCC QAVLMTYYRNNIQHLLILPSLIASMVMYHRRITRTELLHKISMIYPMLKAELFLHYSKEQ CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LPETLDTLIDELARQQLICDKGSELVLNPARIRPLQLLAAGVRETLQRYAITLSLLSATP HHHHHHHHHHHHHHHHHHHCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC SINRGALEKESRIMAQRLSVLHGINAPEFFDKAVFSTLVATLREEGYISDSGDAIQEHTL CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH EVYNMLSALMTPEVKLTIESVSMPAETSNQPEAPETPEPEGKTES HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGWRKIYYKLLNLPLKLLVKSKVIPADPVSELGLDPSRPILYVLPYNSKADLLTLRAQC CHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEECCCCCCHHHHHHHHH LAQDLPDPLIPLEIDGVQLPSHVFIENGPRVFRYYVPKQESVKLFHDYLDLHRNNPALDI HHHHCCCCCCEEEECCEECCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEE QMLPVSVMFGRSPGREGHGTPHLRVLNGVQKFFAVLWLGRDSFVRFSTTVSLRRMASEHG EEECEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCC TDKTIAHKLARVARMHFSRQRLAAVGPSLPARQDLFKKLLASKAIEKAVADEARSKKISH CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKAQQNAITLMEEIAANFSYEAVRLSDRVLSWTWNRLYQGINVHNAERVRQLAQDGHEIV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEE YVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKL EECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH YSTVFREYLGELFTRGYSVEYFVEGGRSRTGRLLEPKTGTLSMTIQAMLRGGTRPITLVP HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCCHHHHHHHHHCCCCCCEEEEE IYIGYEHVMEVGTYAKELRGAIKEKENLLQMLRGLRKLRNLGQGYVNFGEPLPLTTYLNT EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHCC HVPQWRDAIDPIEAQRPSWLTPAVNDLANQIMVRINNAAAANAMNLCSTALLASRQRSLT CCCCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH REQLLEQLDCYLQLMRNAPYAKDTTVPDKTPEELLNHALNMNKFEVEKDTIGDIIILPRE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEEEECCC QAVLMTYYRNNIQHLLILPSLIASMVMYHRRITRTELLHKISMIYPMLKAELFLHYSKEQ CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LPETLDTLIDELARQQLICDKGSELVLNPARIRPLQLLAAGVRETLQRYAITLSLLSATP HHHHHHHHHHHHHHHHHHHCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC SINRGALEKESRIMAQRLSVLHGINAPEFFDKAVFSTLVATLREEGYISDSGDAIQEHTL CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH EVYNMLSALMTPEVKLTIESVSMPAETSNQPEAPETPEPEGKTES HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA