Click here to switch to the map view.

The map label for this gene is 153937874

Identifier: 153937874

GI number: 153937874

Start: 2537766

End: 2538014

Strand: Direct

Name: 153937874

Synonym: CLC_2422

Alternate gene names: NA

Gene position: 2537766-2538014 (Clockwise)

Preceding gene: 153937603

Following gene: 153934826

Centisome position: 67.48

GC content: 27.71

Gene sequence:

>249_bases
TTGCTCCTCTCTCTGTCCATAAGTATAGCTTATAAGGAATCTAAACTGAAACCTTATGAGAAATCAAAAGAAATAAGAAT
TAATAAAAACATAACTACCTATGAGTTATCTGAATTAATAGGAATTCCTCAATCGACCATAAGCAAGATAGAAAATAGCA
AAAGGAAAATCAAAATTGAATCTTTACAAAAATTGGCCAATACTTTTCATGTATCTATAAATGTTTTTTTGATAATGAGA
ATACTGTGA

Upstream 100 bases:

>100_bases
TGTATACAACCTTTGCAGTAACTATTCATTCCAATTATTAATGATCTTTCTTAAAGTTGTTTCCATGATTTACTCGTATC
TAATATTTTACAATTTCGGT

Downstream 100 bases:

>100_bases
TAGAAGAAGAAAATATTAAATTAAATAAAAATATGAAGCTGAATATATATCTGTTTAACTTTTAGAACTACGTTATGAAA
TGTTAGGTAATTTACATTAA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MLLSLSISIAYKESKLKPYEKSKEIRINKNITTYELSELIGIPQSTISKIENSKRKIKIESLQKLANTFHVSINVFLIMR
IL

Sequences:

>Translated_82_residues
MLLSLSISIAYKESKLKPYEKSKEIRINKNITTYELSELIGIPQSTISKIENSKRKIKIESLQKLANTFHVSINVFLIMR
IL
>Mature_82_residues
MLLSLSISIAYKESKLKPYEKSKEIRINKNITTYELSELIGIPQSTISKIENSKRKIKIESLQKLANTFHVSINVFLIMR
IL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9480; Mature: 9480

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSLSISIAYKESKLKPYEKSKEIRINKNITTYELSELIGIPQSTISKIENSKRKIKIE
CEEEEEEEEEEECCCCCCCCCCCEEEECCCCCCEEHHHHHCCCHHHHHHHHCCHHEEEHH
SLQKLANTFHVSINVFLIMRIL
HHHHHHHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MLLSLSISIAYKESKLKPYEKSKEIRINKNITTYELSELIGIPQSTISKIENSKRKIKIE
CEEEEEEEEEEECCCCCCCCCCCEEEECCCCCCEEHHHHHCCCHHHHHHHHCCHHEEEHH
SLQKLANTFHVSINVFLIMRIL
HHHHHHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA