Click here to switch to the map view.

The map label for this gene is 153937761

Identifier: 153937761

GI number: 153937761

Start: 949885

End: 950664

Strand: Reverse

Name: 153937761

Synonym: CLC_0928

Alternate gene names: NA

Gene position: 950664-949885 (Counterclockwise)

Preceding gene: 153936227

Following gene: 153934729

Centisome position: 25.28

GC content: 33.08

Gene sequence:

>780_bases
ATGGAGAGGTTATTTATTATGCAGGCAAAATATGATAAATTTCAGGAGTATGTGTTGGAAATTGGGCGACGCATGGTAAT
GTGTGGAGCTGAGGTCCGTCGTGTAGAAGATACAATTATACGTATCTGTAATGCATATGACATTAAAGTCTGTAATGTAT
ACGCCATTACAACTTTGATTATTATGACAATGAAAGATAGTGAAGGAAGACATTATACACAGTCAGTTAGAATTAATTCT
ACAGCAACGGATTTAGGTCAGTTAGAAGCATTAAATGCTATGGCTAGAGAAATATGCAGTAAAGTTCCCCCCATTTCTGA
AATAGGTTCTGCATTGGATAATAATAAGTTGCGTAAAGAGAGTAATATTAAAAAGTGTATAGGATATATGCTAGCCGCCA
GTGGATTTGCCGTATTTTTTGGAGGAACCTTCCTAGACGGTTTGGTAGCTGCAGTTATTGCAATTGCAATATTTGGAATG
GATCATTTTTTTCAAATTCGTAAATTAAATCGTGTAATATATACAGTAATTGCCTGTTTTTTATCAGGCTGCCTTGCTCA
ATTATGTGGCCATTTTGGACTTTGTATGAATGTGGATAAAGTTATGATTGGAGATATAATGATATTTATACCAGCATTAA
TTTTAATAAATGGTGTAAAAGAAATATTCTATCAAGATATAATGCCTGGATTATATAGACTAATTGAAGCATTTATGATT
GCTCTTTCAATTGCAATAGGATTTGTAGGTTCAATGATGTTATTAGGAGGTATACTTTAA

Upstream 100 bases:

>100_bases
AGTATAAAATAAAAAATAATTATATAATTATATATGTCTAAATTTGTTTCACAATTAACATTTATATTAAGAAATATGTA
TATGAAAAAAACAATTTTTA

Downstream 100 bases:

>100_bases
TGTTGAAAAATATAATACAAGTGCTAATGGCAGGAGTTGGCACCCTGGGATTTACACTATTTTTTTCTGTAGCCAAAAAA
CATGTGGCCGCAGCAACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MERLFIMQAKYDKFQEYVLEIGRRMVMCGAEVRRVEDTIIRICNAYDIKVCNVYAITTLIIMTMKDSEGRHYTQSVRINS
TATDLGQLEALNAMAREICSKVPPISEIGSALDNNKLRKESNIKKCIGYMLAASGFAVFFGGTFLDGLVAAVIAIAIFGM
DHFFQIRKLNRVIYTVIACFLSGCLAQLCGHFGLCMNVDKVMIGDIMIFIPALILINGVKEIFYQDIMPGLYRLIEAFMI
ALSIAIGFVGSMMLLGGIL

Sequences:

>Translated_259_residues
MERLFIMQAKYDKFQEYVLEIGRRMVMCGAEVRRVEDTIIRICNAYDIKVCNVYAITTLIIMTMKDSEGRHYTQSVRINS
TATDLGQLEALNAMAREICSKVPPISEIGSALDNNKLRKESNIKKCIGYMLAASGFAVFFGGTFLDGLVAAVIAIAIFGM
DHFFQIRKLNRVIYTVIACFLSGCLAQLCGHFGLCMNVDKVMIGDIMIFIPALILINGVKEIFYQDIMPGLYRLIEAFMI
ALSIAIGFVGSMMLLGGIL
>Mature_259_residues
MERLFIMQAKYDKFQEYVLEIGRRMVMCGAEVRRVEDTIIRICNAYDIKVCNVYAITTLIIMTMKDSEGRHYTQSVRINS
TATDLGQLEALNAMAREICSKVPPISEIGSALDNNKLRKESNIKKCIGYMLAASGFAVFFGGTFLDGLVAAVIAIAIFGM
DHFFQIRKLNRVIYTVIACFLSGCLAQLCGHFGLCMNVDKVMIGDIMIFIPALILINGVKEIFYQDIMPGLYRLIEAFMI
ALSIAIGFVGSMMLLGGIL

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28822; Mature: 28822

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA