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The map label for this gene is 153937712

Identifier: 153937712

GI number: 153937712

Start: 3274761

End: 3275858

Strand: Direct

Name: 153937712

Synonym: CLC_3104

Alternate gene names: NA

Gene position: 3274761-3275858 (Clockwise)

Preceding gene: 153935015

Following gene: 153935642

Centisome position: 87.08

GC content: 28.96

Gene sequence:

>1098_bases
TTGAAAGTTACGTTTCCACACCTAGGTAATAGCTGCTACGCAGCTAAAGCAATTTTTGATACTTTAGGAATTGAATATAT
AATTCCCAAAGCTAGTAATAAAAAAGCTTTGGAAATAGGTTCTCTTTATTCTCCAGATGAAATATGTCTTCCCTTTAAAC
TAATGATTGGAAACTATGTTCAAAGTATAGAAGCAGGTGCTGATACTATTGTAATAGCAGGTAGTTGTGGCCCTTGTAGG
TTCGGAGAATATTGTGAGCTTCAAATGAACACATTAAAAAAATTAGGCTATGATTTGGATTTTATAGTAATAGATTCTCC
TAAAGATATAGGTAAAGATGAATTTTTAACAAGAATAAACAAAATAGCAATTCACAGTAACGTAAGTTCTACGAAAAAAT
TTTCTTCATTAATATATGGTTTAAAAATAATAAACTTAATGGATTCTTTAGATAAAAAGGCAAAAATAAAAGCTGGCTAT
GAAATAAATAATGGAGACTCAAAAAAAATTCTTTGGGATTGTAAAAATCAGATTTTAAATTGTAAAACTGCCAGAGAAAT
GATTAGCTTAGTAAAACATTATCATAAAAAATTAAAAGAAGTACCCATTGATAAATCAAAAAATCCATTAAAAATAGCTA
TAATAGGAGAAATTTATACTATAATTGAACCTTTTTCAAATCTTTATATTGAAGATAAATTAATGGATTATGGTGTTTGT
ACTTCTAAAGTTTTATATCCTAGTTGGTGGGTGAAAAATACCGCTTTATCCCCTCTTAAATTAGATTGTCTTTCATTAAA
AAAAGCTTCTAAAAAATATTTATCATTAGGTATAGGTGGTTATGGAAGAGAATGTATTGGTGAAGCTGTTCTTGCTAAAA
AAAATGGATTTCATGGAGCTATTCAAATTTTTCCTTTAGGATGTATGCCAGAAATTGTTTCTAAATCCATACTCCCTACT
ATATCCAAAAATGAAAACTTCCCTATTATGTCCCTTGTGGTAGATGAAATGACAGGAGAAGCAGGATATTCAACTCGTAT
AGAAGCCTTTATAGATTTATTAGAAAGGAGAGAAGACAATGTATTATATGGGAGTTGA

Upstream 100 bases:

>100_bases
CTATATTAATTCTAAAGATAGATGAACAAACAGGCGAAGCAGGATTTCACACTAGAATTGAGGCCTTTACAGATATGTTA
GAAAGGAAGTGTATTTAATT

Downstream 100 bases:

>100_bases
TATAGGTTCTGTAAGTACAGATATTGTAATTATTGATGAAAATTCAAATGTTATTGATTCTTTGTATTTAAGAACCAAAG
GAAATCCTATAAAAACTATA

Product: putative R-2-hydroxyglutaryl-CoA dehydratase subunit

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKVTFPHLGNSCYAAKAIFDTLGIEYIIPKASNKKALEIGSLYSPDEICLPFKLMIGNYVQSIEAGADTIVIAGSCGPCR
FGEYCELQMNTLKKLGYDLDFIVIDSPKDIGKDEFLTRINKIAIHSNVSSTKKFSSLIYGLKIINLMDSLDKKAKIKAGY
EINNGDSKKILWDCKNQILNCKTAREMISLVKHYHKKLKEVPIDKSKNPLKIAIIGEIYTIIEPFSNLYIEDKLMDYGVC
TSKVLYPSWWVKNTALSPLKLDCLSLKKASKKYLSLGIGGYGRECIGEAVLAKKNGFHGAIQIFPLGCMPEIVSKSILPT
ISKNENFPIMSLVVDEMTGEAGYSTRIEAFIDLLERREDNVLYGS

Sequences:

>Translated_365_residues
MKVTFPHLGNSCYAAKAIFDTLGIEYIIPKASNKKALEIGSLYSPDEICLPFKLMIGNYVQSIEAGADTIVIAGSCGPCR
FGEYCELQMNTLKKLGYDLDFIVIDSPKDIGKDEFLTRINKIAIHSNVSSTKKFSSLIYGLKIINLMDSLDKKAKIKAGY
EINNGDSKKILWDCKNQILNCKTAREMISLVKHYHKKLKEVPIDKSKNPLKIAIIGEIYTIIEPFSNLYIEDKLMDYGVC
TSKVLYPSWWVKNTALSPLKLDCLSLKKASKKYLSLGIGGYGRECIGEAVLAKKNGFHGAIQIFPLGCMPEIVSKSILPT
ISKNENFPIMSLVVDEMTGEAGYSTRIEAFIDLLERREDNVLYGS
>Mature_365_residues
MKVTFPHLGNSCYAAKAIFDTLGIEYIIPKASNKKALEIGSLYSPDEICLPFKLMIGNYVQSIEAGADTIVIAGSCGPCR
FGEYCELQMNTLKKLGYDLDFIVIDSPKDIGKDEFLTRINKIAIHSNVSSTKKFSSLIYGLKIINLMDSLDKKAKIKAGY
EINNGDSKKILWDCKNQILNCKTAREMISLVKHYHKKLKEVPIDKSKNPLKIAIIGEIYTIIEPFSNLYIEDKLMDYGVC
TSKVLYPSWWVKNTALSPLKLDCLSLKKASKKYLSLGIGGYGRECIGEAVLAKKNGFHGAIQIFPLGCMPEIVSKSILPT
ISKNENFPIMSLVVDEMTGEAGYSTRIEAFIDLLERREDNVLYGS

Specific function: Unknown

COG id: COG3581

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40688; Mature: 40688

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTFPHLGNSCYAAKAIFDTLGIEYIIPKASNKKALEIGSLYSPDEICLPFKLMIGNYV
CEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
QSIEAGADTIVIAGSCGPCRFGEYCELQMNTLKKLGYDLDFIVIDSPKDIGKDEFLTRIN
HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHH
KIAIHSNVSSTKKFSSLIYGLKIINLMDSLDKKAKIKAGYEINNGDSKKILWDCKNQILN
HHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEECCCCCCEEEHHHHHHHHC
CKTAREMISLVKHYHKKLKEVPIDKSKNPLKIAIIGEIYTIIEPFSNLYIEDKLMDYGVC
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCEEHHHHHHCCCC
TSKVLYPSWWVKNTALSPLKLDCLSLKKASKKYLSLGIGGYGRECIGEAVLAKKNGFHGA
CCCEECCCCEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCE
IQIFPLGCMPEIVSKSILPTISKNENFPIMSLVVDEMTGEAGYSTRIEAFIDLLERREDN
EEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
VLYGS
CCCCC
>Mature Secondary Structure
MKVTFPHLGNSCYAAKAIFDTLGIEYIIPKASNKKALEIGSLYSPDEICLPFKLMIGNYV
CEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
QSIEAGADTIVIAGSCGPCRFGEYCELQMNTLKKLGYDLDFIVIDSPKDIGKDEFLTRIN
HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHH
KIAIHSNVSSTKKFSSLIYGLKIINLMDSLDKKAKIKAGYEINNGDSKKILWDCKNQILN
HHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEECCCCCCEEEHHHHHHHHC
CKTAREMISLVKHYHKKLKEVPIDKSKNPLKIAIIGEIYTIIEPFSNLYIEDKLMDYGVC
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCEEHHHHHHCCCC
TSKVLYPSWWVKNTALSPLKLDCLSLKKASKKYLSLGIGGYGRECIGEAVLAKKNGFHGA
CCCEECCCCEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCE
IQIFPLGCMPEIVSKSILPTISKNENFPIMSLVVDEMTGEAGYSTRIEAFIDLLERREDN
EEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
VLYGS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA