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The map label for this gene is yloA [H]

Identifier: 153937687

GI number: 153937687

Start: 1961871

End: 1963601

Strand: Direct

Name: yloA [H]

Synonym: CLC_1857

Alternate gene names: 153937687

Gene position: 1961871-1963601 (Clockwise)

Preceding gene: 153935276

Following gene: 153935153

Centisome position: 52.17

GC content: 26.0

Gene sequence:

>1731_bases
ATGGCTTTAGATGGGATTTTTTTATTTAGTATGATAAATGAAATGAAAACCAAAATATTGAACGGTAGAGTAGATAAAGT
AACTCAGCCAGAAAAGGATGAAATAGTTTTATCCATAAAAAATAATAGAAAAACTTACAAACTTTTAATTAGTTCTAGCG
CTGTATACCCTAAAATACATTTTACGGATATTCCTAAGAAAAATCCTATGCAGCCCCCTATGTTTTGTATGGTTCTTAGA
AAATACTTAAATTCTTCCAAAATAATAAATATAAGACAATTGGATACGGATAGAATAGTCTTAATAGACTTTGAAAGTGC
TGATGAAATGGGATTTAACAGTATATATACGTTAATTATAGAAATTATGGGGAGACATAGTAATATAACCTTAGTAAGAG
AAAGGGATAATCTAATAATGGATAGCATAAAACATGTTACTCCTGAAATAAATAGTGTAAGGAATCTTTATCCTTCCATA
GAATATATATATCCACCAGCCTCTTTAAAACTAAATCCTTTTAATTTTTCACTAAAAGATTTTAAAGATTATATAAAGGA
TAATAACGTGAAACTTAATAAAACTATGTTTTCCAATATATTTACAGGAGTAGCAATGCCCTTTTCCAAGGAAATTCTTT
ACAGATTGGAAAAAGAAAATAATCTAGAAATTACTTTAGAAAACATGGATGAAATATATGTTGTTACAAAAAATATATTT
GATTCTATAAAAAATAAAGAATTCTGTTTTAATTGTTATTTAGAAAAGGACACTGTAAAAGATTTTTATTGTGTAAACCT
TCATAGTTTGTATAATTTTAAAAATATAGATTATGAAAATCCTTCTCTTCTTATAGAATCTTTTTATTTTGAAAAGGATA
AATCAGATAGATTAAATTCTAAAAGCTCCGATCTTCAAAAACTAATAAATGTAAACATTGAAAGATGCGAAAAGAAAATC
AAAATATTAGAAGGAAATCTAAAGGATTGCAATGAAAGAGAAAAATTTCAGATATGCGGAGAAATTTTAACCGCGAACAT
ATATGCTCTTAAGAAGGGTATGGATAAAGTAAATCTTTTGAACTATTATACTAATGAATATATGGATATAAAATTGGATC
CTAACAAAAACCCTTCTGATAACATACAAAAATACTTTAAAAAATATAATAAGCTAAAAAAGACTGAAGTTGCAGCTAAA
GAACAAATAGAACTTACTTGTGATGAGTTAAAATATCTAAATTCTGTTTTAACTAGTATAAAAAATGCAGATAGTTATGA
TGATATAGAAGAAATTAAAAGAGAGCTTATTGAAACAGGTTACATTAAATTTAAAAAGAAAAATAATAAGAAATTTAAAA
ATACAAAACCATTGCACTTTATTTCTTCAGATGGCATAGATATTTATGTGGGAAAAAACAATATACAAAATGATTATCTA
ACATTAAAATTTGCTAGTAATCATGACATTTGGATGCATACAAAAAATATACCTGGATCACATATAATAGTTAAAAATTT
CCAAGGAAATGTTCCTGAAAAAACTTTAGAAGAAGCTGCCACCTTAGCAGCCTTTTATAGTAAATCTAAAGATTCTACAA
AAGTTCCTGTAGACTACACAGAGGTTAAAAATGTTCACAAACCTAATGGGGCAAAACCAGGTATGGTAATATATTACACA
AACAAAACCATATTTATAGATCCAAAAGAACCTAATTTAAAACAAATTTAG

Upstream 100 bases:

>100_bases
TAAAAATTTAAAATGGTATACTAATATAAGTTTAATAGCCTTTGATATTAGCATACTTTGCTATATACATTATATTATAC
CATTTTAAGGAGGAATATTT

Downstream 100 bases:

>100_bases
AACAGATTAAAAAGTAATATCTAAATAGAACTAATTAACTAAATATATTTGTAAAGGAAGTACTAAATATGACTAATATA
AAATTATATATACAATATGA

Product: fibronectin-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MALDGIFLFSMINEMKTKILNGRVDKVTQPEKDEIVLSIKNNRKTYKLLISSSAVYPKIHFTDIPKKNPMQPPMFCMVLR
KYLNSSKIINIRQLDTDRIVLIDFESADEMGFNSIYTLIIEIMGRHSNITLVRERDNLIMDSIKHVTPEINSVRNLYPSI
EYIYPPASLKLNPFNFSLKDFKDYIKDNNVKLNKTMFSNIFTGVAMPFSKEILYRLEKENNLEITLENMDEIYVVTKNIF
DSIKNKEFCFNCYLEKDTVKDFYCVNLHSLYNFKNIDYENPSLLIESFYFEKDKSDRLNSKSSDLQKLINVNIERCEKKI
KILEGNLKDCNEREKFQICGEILTANIYALKKGMDKVNLLNYYTNEYMDIKLDPNKNPSDNIQKYFKKYNKLKKTEVAAK
EQIELTCDELKYLNSVLTSIKNADSYDDIEEIKRELIETGYIKFKKKNNKKFKNTKPLHFISSDGIDIYVGKNNIQNDYL
TLKFASNHDIWMHTKNIPGSHIIVKNFQGNVPEKTLEEAATLAAFYSKSKDSTKVPVDYTEVKNVHKPNGAKPGMVIYYT
NKTIFIDPKEPNLKQI

Sequences:

>Translated_576_residues
MALDGIFLFSMINEMKTKILNGRVDKVTQPEKDEIVLSIKNNRKTYKLLISSSAVYPKIHFTDIPKKNPMQPPMFCMVLR
KYLNSSKIINIRQLDTDRIVLIDFESADEMGFNSIYTLIIEIMGRHSNITLVRERDNLIMDSIKHVTPEINSVRNLYPSI
EYIYPPASLKLNPFNFSLKDFKDYIKDNNVKLNKTMFSNIFTGVAMPFSKEILYRLEKENNLEITLENMDEIYVVTKNIF
DSIKNKEFCFNCYLEKDTVKDFYCVNLHSLYNFKNIDYENPSLLIESFYFEKDKSDRLNSKSSDLQKLINVNIERCEKKI
KILEGNLKDCNEREKFQICGEILTANIYALKKGMDKVNLLNYYTNEYMDIKLDPNKNPSDNIQKYFKKYNKLKKTEVAAK
EQIELTCDELKYLNSVLTSIKNADSYDDIEEIKRELIETGYIKFKKKNNKKFKNTKPLHFISSDGIDIYVGKNNIQNDYL
TLKFASNHDIWMHTKNIPGSHIIVKNFQGNVPEKTLEEAATLAAFYSKSKDSTKVPVDYTEVKNVHKPNGAKPGMVIYYT
NKTIFIDPKEPNLKQI
>Mature_575_residues
ALDGIFLFSMINEMKTKILNGRVDKVTQPEKDEIVLSIKNNRKTYKLLISSSAVYPKIHFTDIPKKNPMQPPMFCMVLRK
YLNSSKIINIRQLDTDRIVLIDFESADEMGFNSIYTLIIEIMGRHSNITLVRERDNLIMDSIKHVTPEINSVRNLYPSIE
YIYPPASLKLNPFNFSLKDFKDYIKDNNVKLNKTMFSNIFTGVAMPFSKEILYRLEKENNLEITLENMDEIYVVTKNIFD
SIKNKEFCFNCYLEKDTVKDFYCVNLHSLYNFKNIDYENPSLLIESFYFEKDKSDRLNSKSSDLQKLINVNIERCEKKIK
ILEGNLKDCNEREKFQICGEILTANIYALKKGMDKVNLLNYYTNEYMDIKLDPNKNPSDNIQKYFKKYNKLKKTEVAAKE
QIELTCDELKYLNSVLTSIKNADSYDDIEEIKRELIETGYIKFKKKNNKKFKNTKPLHFISSDGIDIYVGKNNIQNDYLT
LKFASNHDIWMHTKNIPGSHIIVKNFQGNVPEKTLEEAATLAAFYSKSKDSTKVPVDYTEVKNVHKPNGAKPGMVIYYTN
KTIFIDPKEPNLKQI

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI32565397, Length=559, Percent_Identity=23.9713774597496, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 67221; Mature: 67090

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDGIFLFSMINEMKTKILNGRVDKVTQPEKDEIVLSIKNNRKTYKLLISSSAVYPKIH
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCEEE
FTDIPKKNPMQPPMFCMVLRKYLNSSKIINIRQLDTDRIVLIDFESADEMGFNSIYTLII
EECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHH
EIMGRHSNITLVRERDNLIMDSIKHVTPEINSVRNLYPSIEYIYPPASLKLNPFNFSLKD
HHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCEEECCCCCCHHH
FKDYIKDNNVKLNKTMFSNIFTGVAMPFSKEILYRLEKENNLEITLENMDEIYVVTKNIF
HHHHHCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHH
DSIKNKEFCFNCYLEKDTVKDFYCVNLHSLYNFKNIDYENPSLLIESFYFEKDKSDRLNS
HHHCCCCEEEEEEEECCCCCCEEEEEHHHHHCCCCCCCCCHHHEEEHHHCCCCCCCCCCC
KSSDLQKLINVNIERCEKKIKILEGNLKDCNEREKFQICGEILTANIYALKKGMDKVNLL
CHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
NYYTNEYMDIKLDPNKNPSDNIQKYFKKYNKLKKTEVAAKEQIELTCDELKYLNSVLTSI
HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHH
KNADSYDDIEEIKRELIETGYIKFKKKNNKKFKNTKPLHFISSDGIDIYVGKNNIQNDYL
CCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCEE
TLKFASNHDIWMHTKNIPGSHIIVKNFQGNVPEKTLEEAATLAAFYSKSKDSTKVPVDYT
EEEEECCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
EVKNVHKPNGAKPGMVIYYTNKTIFIDPKEPNLKQI
HHHCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCC
>Mature Secondary Structure 
ALDGIFLFSMINEMKTKILNGRVDKVTQPEKDEIVLSIKNNRKTYKLLISSSAVYPKIH
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCEEE
FTDIPKKNPMQPPMFCMVLRKYLNSSKIINIRQLDTDRIVLIDFESADEMGFNSIYTLII
EECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHH
EIMGRHSNITLVRERDNLIMDSIKHVTPEINSVRNLYPSIEYIYPPASLKLNPFNFSLKD
HHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCEEECCCCCCHHH
FKDYIKDNNVKLNKTMFSNIFTGVAMPFSKEILYRLEKENNLEITLENMDEIYVVTKNIF
HHHHHCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHH
DSIKNKEFCFNCYLEKDTVKDFYCVNLHSLYNFKNIDYENPSLLIESFYFEKDKSDRLNS
HHHCCCCEEEEEEEECCCCCCEEEEEHHHHHCCCCCCCCCHHHEEEHHHCCCCCCCCCCC
KSSDLQKLINVNIERCEKKIKILEGNLKDCNEREKFQICGEILTANIYALKKGMDKVNLL
CHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
NYYTNEYMDIKLDPNKNPSDNIQKYFKKYNKLKKTEVAAKEQIELTCDELKYLNSVLTSI
HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHH
KNADSYDDIEEIKRELIETGYIKFKKKNNKKFKNTKPLHFISSDGIDIYVGKNNIQNDYL
CCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCEE
TLKFASNHDIWMHTKNIPGSHIIVKNFQGNVPEKTLEEAATLAAFYSKSKDSTKVPVDYT
EEEEECCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
EVKNVHKPNGAKPGMVIYYTNKTIFIDPKEPNLKQI
HHHCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]