Click here to switch to the map view.

The map label for this gene is 153937636

Identifier: 153937636

GI number: 153937636

Start: 105547

End: 106788

Strand: Direct

Name: 153937636

Synonym: CLC_0129

Alternate gene names: NA

Gene position: 105547-106788 (Clockwise)

Preceding gene: 153937047

Following gene: 153936835

Centisome position: 2.81

GC content: 26.73

Gene sequence:

>1242_bases
GTGGCACAAAAAAAGAATTATAGTAGATACTTTATAATATTAGAAGAAGATGAAAAAGGATACTCTTTAGGTGTTGATAA
ATCTGCATCAGGATATGTAAAATTAGAAAATAAAAATGGCAAGTGTAAAATATCTTATTATGTTCAAAATATAAAAAAGC
AATCTTCACCTTACCACATGGTTTTAATATGCAATAAAAAAGGAACCAAAGATATAATAAAAATAGGAGAAATGAACATA
GATGAATATGGAAGAGCAGACATATGTTATGAATATCCAGTAGACAACATAGGAAATAGTGAAATAAATGCAGATAAAAT
ATCAGGAGCAGCAATAGTAAAATTTATAGATTCAAATATAATATCTGTTATGAGTGGATTCTCAACAACGGACATACCAA
CATGGAAATCATTTAGTATTATAGAAAGTAAGGAAATAAAGAAAGAAGAAATAAAAGAAGAAAAGGTTAATAAAACAATA
TTTGATAAATATGAGGAATCGATAGAAGAAATAAAAATTAAAGATAGTAATAGCGCCAATAAAGATAACAAAGTAAAATC
AGTACAAGAAAATAAAGAACAAGAACATAAAGAAAAAAATTTAGATAATAAAAACAAAGAAAAAGGTGAAAATATAGAAA
AGCCTAACGAAAAGCCTAATGAGAAGGCTAACGAAAAGCCTAACGAGAAGCCTAATGAAAAGGCTAACGAAAAGCCTAAC
GAGAAGCCTAATGAAAAGGCTAACGAAAAGCCTAATGAAAAAAATTTAGGAAAAACAAAGAAATCTATAGAAGAAAATGA
AGATAAAAAAAGAAATAAGCAAAACATACCTATTGGATTAGAAGGTAAGTATTTTAGATCTTTAGTAGAAGACTTAGACA
GTATAGATAATATAACTGATGAAATAAAAAATTGTATTTGGTACAAAATAGATGCTAAAGACGAAGATGATATGAGAAAT
ACCTGTAATTATGATAAATTTATGGTTTTATATAATCCTATGTTAGGATATTATCCTTATATAAAAAAACATGGACATTA
CATTTTAGGTTATAAGTGTGATATTTCAGGTAATATGAAATATTTAGTATACGGAATCCCTGGAAACAAGACTAGAGAGG
AGCAACCATTTAAAGGCAAATCAGGATTTGTCACTTGGATTGAAAACAAAGAAAATAATTTAGGATACTGGCTAATGTTT
TATGACTATAAAACTAATAATATATTAATACCTGTTAAATAG

Upstream 100 bases:

>100_bases
TTGTATATATGATATATTATAATTTAAATAATTAAGTTCACTTTTTGTAAGATAACTCATATATTATATTGAATAATTAT
ATTTGGGGGTACAATAAAAA

Downstream 100 bases:

>100_bases
GGGCATGTTAATACATGTCTCTGTTTTTTATGTTGTTTATTATGATATTAATATTTTAAGAAGTAATAATAAAATTATTT
TTAAAGCATATATATGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MAQKKNYSRYFIILEEDEKGYSLGVDKSASGYVKLENKNGKCKISYYVQNIKKQSSPYHMVLICNKKGTKDIIKIGEMNI
DEYGRADICYEYPVDNIGNSEINADKISGAAIVKFIDSNIISVMSGFSTTDIPTWKSFSIIESKEIKKEEIKEEKVNKTI
FDKYEESIEEIKIKDSNSANKDNKVKSVQENKEQEHKEKNLDNKNKEKGENIEKPNEKPNEKANEKPNEKPNEKANEKPN
EKPNEKANEKPNEKNLGKTKKSIEENEDKKRNKQNIPIGLEGKYFRSLVEDLDSIDNITDEIKNCIWYKIDAKDEDDMRN
TCNYDKFMVLYNPMLGYYPYIKKHGHYILGYKCDISGNMKYLVYGIPGNKTREEQPFKGKSGFVTWIENKENNLGYWLMF
YDYKTNNILIPVK

Sequences:

>Translated_413_residues
MAQKKNYSRYFIILEEDEKGYSLGVDKSASGYVKLENKNGKCKISYYVQNIKKQSSPYHMVLICNKKGTKDIIKIGEMNI
DEYGRADICYEYPVDNIGNSEINADKISGAAIVKFIDSNIISVMSGFSTTDIPTWKSFSIIESKEIKKEEIKEEKVNKTI
FDKYEESIEEIKIKDSNSANKDNKVKSVQENKEQEHKEKNLDNKNKEKGENIEKPNEKPNEKANEKPNEKPNEKANEKPN
EKPNEKANEKPNEKNLGKTKKSIEENEDKKRNKQNIPIGLEGKYFRSLVEDLDSIDNITDEIKNCIWYKIDAKDEDDMRN
TCNYDKFMVLYNPMLGYYPYIKKHGHYILGYKCDISGNMKYLVYGIPGNKTREEQPFKGKSGFVTWIENKENNLGYWLMF
YDYKTNNILIPVK
>Mature_412_residues
AQKKNYSRYFIILEEDEKGYSLGVDKSASGYVKLENKNGKCKISYYVQNIKKQSSPYHMVLICNKKGTKDIIKIGEMNID
EYGRADICYEYPVDNIGNSEINADKISGAAIVKFIDSNIISVMSGFSTTDIPTWKSFSIIESKEIKKEEIKEEKVNKTIF
DKYEESIEEIKIKDSNSANKDNKVKSVQENKEQEHKEKNLDNKNKEKGENIEKPNEKPNEKANEKPNEKPNEKANEKPNE
KPNEKANEKPNEKNLGKTKKSIEENEDKKRNKQNIPIGLEGKYFRSLVEDLDSIDNITDEIKNCIWYKIDAKDEDDMRNT
CNYDKFMVLYNPMLGYYPYIKKHGHYILGYKCDISGNMKYLVYGIPGNKTREEQPFKGKSGFVTWIENKENNLGYWLMFY
DYKTNNILIPVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48023; Mature: 47892

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQKKNYSRYFIILEEDEKGYSLGVDKSASGYVKLENKNGKCKISYYVQNIKKQSSPYHM
CCCCCCCCEEEEEEEECCCCCEECCCCCCCCEEEEECCCCCEEEEHHHHHHHHCCCCEEE
VLICNKKGTKDIIKIGEMNIDEYGRADICYEYPVDNIGNSEINADKISGAAIVKFIDSNI
EEEECCCCCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCHHEEHHHHHHH
ISVMSGFSTTDIPTWKSFSIIESKEIKKEEIKEEKVNKTIFDKYEESIEEIKIKDSNSAN
HHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
KDNKVKSVQENKEQEHKEKNLDNKNKEKGENIEKPNEKPNEKANEKPNEKPNEKANEKPN
CCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EKPNEKANEKPNEKNLGKTKKSIEENEDKKRNKQNIPIGLEGKYFRSLVEDLDSIDNITD
CCCCCHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EIKNCIWYKIDAKDEDDMRNTCNYDKFMVLYNPMLGYYPYIKKHGHYILGYKCDISGNMK
HHHCEEEEEECCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCEEEEEEEECCCCEE
YLVYGIPGNKTREEQPFKGKSGFVTWIENKENNLGYWLMFYDYKTNNILIPVK
EEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCEEEEEC
>Mature Secondary Structure 
AQKKNYSRYFIILEEDEKGYSLGVDKSASGYVKLENKNGKCKISYYVQNIKKQSSPYHM
CCCCCCCEEEEEEEECCCCCEECCCCCCCCEEEEECCCCCEEEEHHHHHHHHCCCCEEE
VLICNKKGTKDIIKIGEMNIDEYGRADICYEYPVDNIGNSEINADKISGAAIVKFIDSNI
EEEECCCCCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCHHEEHHHHHHH
ISVMSGFSTTDIPTWKSFSIIESKEIKKEEIKEEKVNKTIFDKYEESIEEIKIKDSNSAN
HHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
KDNKVKSVQENKEQEHKEKNLDNKNKEKGENIEKPNEKPNEKANEKPNEKPNEKANEKPN
CCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EKPNEKANEKPNEKNLGKTKKSIEENEDKKRNKQNIPIGLEGKYFRSLVEDLDSIDNITD
CCCCCHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EIKNCIWYKIDAKDEDDMRNTCNYDKFMVLYNPMLGYYPYIKKHGHYILGYKCDISGNMK
HHHCEEEEEECCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCEEEEEEEECCCCEE
YLVYGIPGNKTREEQPFKGKSGFVTWIENKENNLGYWLMFYDYKTNNILIPVK
EEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA