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The map label for this gene is yfeT [C]

Identifier: 153937473

GI number: 153937473

Start: 1435885

End: 1436424

Strand: Direct

Name: yfeT [C]

Synonym: CLC_1380

Alternate gene names: 153937473

Gene position: 1435885-1436424 (Clockwise)

Preceding gene: 153935978

Following gene: 153936738

Centisome position: 38.18

GC content: 29.44

Gene sequence:

>540_bases
ATGATTGACACCATAAATGATACTAAGGAATTAGTAGATGATGAAAAATTGTTAGAAGCTGTTAAAGCAATAAAAAATGC
GGAAACAATTTACCTATATGGTGTTGGAGCATCTGCTATGGTGGCTATGGATTTTCAATATAAATTGCTTAGAATAAATA
AAAAGGTAATGTTCCAACAGGATTCACATCTGCAGTTAGCAGTATCAGTGCATATTACAAATAGAGATGTTGCTGTAGCT
ATTTCATATAGTGGAAATACAAGAGAAGTAAATTTAGCAGTAGAGGAAGCGAAAAAAAATGGTGCTACCACTATAGCTAT
AACTAAATGTGGAAAAAGCATTTTAAGCAATATTGCGGATATAAATTTAAATATACCCAGTATAGAAAAAGATTTGAGAA
TAGGGGCAATTTCTTCTAGAACATCTCAATTATTTGTAACTGATAGTTTGTTTTTAGGAATTGCAAAGGAAAATTTGGAT
AAAACAGAAAAGAATTTAATTAATACAAGAAATTTAGTAGAAGTTTTAAAAAGAGAATAG

Upstream 100 bases:

>100_bases
ACTTGTTGCAGAAGAATATACTAAAGAAAGTACAGAGCTTGATTATATAATAAATTATAATGATAGTATAGATTCAATTA
TTAATAAACTTGGAAATAAA

Downstream 100 bases:

>100_bases
ATTATAAAACTTTTTATTTTAAACTGAAAAGTTAATCTAGATGGTGAAGCAATGAGTATAAAAATTCATTGCTTTTATTT
TATTTAAACATAAGAACGAA

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MIDTINDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNRDVAVA
ISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAISSRTSQLFVTDSLFLGIAKENLD
KTEKNLINTRNLVEVLKRE

Sequences:

>Translated_179_residues
MIDTINDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNRDVAVA
ISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAISSRTSQLFVTDSLFLGIAKENLD
KTEKNLINTRNLVEVLKRE
>Mature_179_residues
MIDTINDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNRDVAVA
ISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAISSRTSQLFVTDSLFLGIAKENLD
KTEKNLINTRNLVEVLKRE

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=173, Percent_Identity=36.9942196531792, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI87082369, Length=173, Percent_Identity=30.635838150289, Blast_Score=89, Evalue=1e-19,
Organism=Escherichia coli, GI87082130, Length=163, Percent_Identity=32.5153374233129, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788159, Length=175, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 19826; Mature: 19826

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTINDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQ
CCCCCCCHHHHHCHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCEEEEEEECHHEEEEC
DSHLQLAVSVHITNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIAD
CCCEEEEEEEEEECCCEEEEEEECCCCEEEEEEEEEHHCCCCEEEEEEHHHHHHHHHHHC
INLNIPSIEKDLRIGAISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVLKRE
CCCCCCCCCCCEEEEEECCCCCEEEEEHHHEEEEHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDTINDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQ
CCCCCCCHHHHHCHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCEEEEEEECHHEEEEC
DSHLQLAVSVHITNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIAD
CCCEEEEEEEEEECCCEEEEEEECCCCEEEEEEEEEHHCCCCEEEEEEHHHHHHHHHHHC
INLNIPSIEKDLRIGAISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVLKRE
CCCCCCCCCCCEEEEEECCCCCEEEEEHHHEEEEHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]