| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is 153937369
Identifier: 153937369
GI number: 153937369
Start: 1011088
End: 1011789
Strand: Direct
Name: 153937369
Synonym: CLC_0987
Alternate gene names: NA
Gene position: 1011088-1011789 (Clockwise)
Preceding gene: 153934480
Following gene: 153935938
Centisome position: 26.89
GC content: 26.92
Gene sequence:
>702_bases TTGGATAAATTCATACAAAATATAAAGACAGCTAAGGATATAAAAAATTCAATTTATTATAAACTTAGGCATGAATTTTT ATATCATTCAAATAAAATAGAGGGAAGTACATTTACTACAGAATCCCTTGCATTATTACTTGATAAGAATATTGTTGAAG GTAAGCATACATTAGATGATGTTCAGGAAACTGTGAATTCATCCTACGTGTTTGATTATATTATAGATACCATTGACGAA GAGGTTGATATGAGATATATAAAATATTTACATAGTATGTTAAAGCATAATACAACAGATTATGAAAGAGGATTTTCAGG AGTATTTAAGAAAATACCTAACACTATTTTAGGTACAGATGTGCAATTGGCTCAACCTTATGAAGTCGAGTATAAATTAG AAGAACTTATATCATGGTACTACCAAAATAAAATTGTAGATTTAGATATAATAGCAGAATTCCATTTTAGATTTGAAATG ATTCATCCATTTCAAGATGGTAATGGTAGAATAGGTAGATTTCTAATGCTAAAACAATTGTTAGAGAATAATCTACCTTT ATTTATAATATCTTGGGATACAGAGGATTTATATAGAAAAGCACTAGCAAAATGCTCAACAGGAAGTTATGCACCTTTAG TTGAATATTTAAAATCTCTTAATGATTTTAAAGAAGTAAATAAAGCTTTATGGGATTTTTAA
Upstream 100 bases:
>100_bases TATGATAAGCAGACTCATTCATGAAAGAGGAAGTATTTATAGAAAATGAGGTAATGTAGAGGGATATATTAAAAACAATA AATACGAGGAGTGGATTTAA
Downstream 100 bases:
>100_bases ATTTAATAAAATTGGAGGAAAATAAAATTATGTTAGATTTATTAAAACAAAGAAGAAGCATAAGAAAATTTCAACAAAAG CCAATAGAAGAGGAAAAAGT
Product: Fic family protein
Products: NA
Alternate protein names: Fic Family Protein; Fic Protein; Truncated Fic Protein Family Protein; Filamentation Induced By CAMP Protein Fic-Like Protein; Fic Family Protein xin-Antitoxin System; Filamentation Induced By CAMP Family Protein; Fic-Domain-Containing Protein; Fic Protein Involved In; Filamentation Induced By Camp Protein Fic; Fic Family xin-Antitoxin System Toxin Component; Filamentation Induced By CAMP Protein; Fic/DOC Family Protein
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MDKFIQNIKTAKDIKNSIYYKLRHEFLYHSNKIEGSTFTTESLALLLDKNIVEGKHTLDDVQETVNSSYVFDYIIDTIDE EVDMRYIKYLHSMLKHNTTDYERGFSGVFKKIPNTILGTDVQLAQPYEVEYKLEELISWYYQNKIVDLDIIAEFHFRFEM IHPFQDGNGRIGRFLMLKQLLENNLPLFIISWDTEDLYRKALAKCSTGSYAPLVEYLKSLNDFKEVNKALWDF
Sequences:
>Translated_233_residues MDKFIQNIKTAKDIKNSIYYKLRHEFLYHSNKIEGSTFTTESLALLLDKNIVEGKHTLDDVQETVNSSYVFDYIIDTIDE EVDMRYIKYLHSMLKHNTTDYERGFSGVFKKIPNTILGTDVQLAQPYEVEYKLEELISWYYQNKIVDLDIIAEFHFRFEM IHPFQDGNGRIGRFLMLKQLLENNLPLFIISWDTEDLYRKALAKCSTGSYAPLVEYLKSLNDFKEVNKALWDF >Mature_233_residues MDKFIQNIKTAKDIKNSIYYKLRHEFLYHSNKIEGSTFTTESLALLLDKNIVEGKHTLDDVQETVNSSYVFDYIIDTIDE EVDMRYIKYLHSMLKHNTTDYERGFSGVFKKIPNTILGTDVQLAQPYEVEYKLEELISWYYQNKIVDLDIIAEFHFRFEM IHPFQDGNGRIGRFLMLKQLLENNLPLFIISWDTEDLYRKALAKCSTGSYAPLVEYLKSLNDFKEVNKALWDF
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27547; Mature: 27547
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKFIQNIKTAKDIKNSIYYKLRHEFLYHSNKIEGSTFTTESLALLLDKNIVEGKHTLDD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH VQETVNSSYVFDYIIDTIDEEVDMRYIKYLHSMLKHNTTDYERGFSGVFKKIPNTILGTD HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCC VQLAQPYEVEYKLEELISWYYQNKIVDLDIIAEFHFRFEMIHPFQDGNGRIGRFLMLKQL CCCCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHH LENNLPLFIISWDTEDLYRKALAKCSTGSYAPLVEYLKSLNDFKEVNKALWDF HHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDKFIQNIKTAKDIKNSIYYKLRHEFLYHSNKIEGSTFTTESLALLLDKNIVEGKHTLDD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH VQETVNSSYVFDYIIDTIDEEVDMRYIKYLHSMLKHNTTDYERGFSGVFKKIPNTILGTD HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCC VQLAQPYEVEYKLEELISWYYQNKIVDLDIIAEFHFRFEMIHPFQDGNGRIGRFLMLKQL CCCCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHH LENNLPLFIISWDTEDLYRKALAKCSTGSYAPLVEYLKSLNDFKEVNKALWDF HHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA