| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is yqhQ [H]
Identifier: 153937305
GI number: 153937305
Start: 167378
End: 168295
Strand: Direct
Name: yqhQ [H]
Synonym: CLC_0185
Alternate gene names: 153937305
Gene position: 167378-168295 (Clockwise)
Preceding gene: 153936545
Following gene: 153935975
Centisome position: 4.45
GC content: 27.45
Gene sequence:
>918_bases GTGGGGAAAAGTACTAACGTTGGGGGACAAGCAGTTTTAGAAGGGGTAATGATGAGAGGGAAAAATGGTATAGCAACGGC AGTTAGAAAAACAAATGGGGAAGTGATTGTAAATAAAGAAAGCTATACACCTTACACTAAAAAAAGTTTTTTCTTTTCTC TACCAATAATAAGAGGCTTTGTATCTCTTATTGAATCTTTAGTAATAGGCATACAAACTTTAAATTATTCTGCATCATTT TTTGAAGAACAGGTTGAAGAGTCTAAATTTGATAAATGGTTTAATAGAACTTTTAAGGATAAAGCAGATAATATTTTAAT TGGAATAACATTACTCATATCTTTTATTATATCTGCAGTAGTATTTTTTATTTTTCCAACCTTTATAGCTAATTTTTTTA AAAAAATATATATACAAAATACCTTATTATTAAATATAATAGAAGGAATAATAAGAATAGCTATATTTTTATTATATATT TTATTAATAAGCAATATGGAAGATATAAAAAGGGTATTTCAGTACCATGGGGCAGAACATAAGACTATATTTTGTTATGA AAATCATATGGATCTAATACCTGAAAATGCTATAAAATTTACAAGATTTCATCCAAGATGTGGAACGAATTTTTTGTTTT TAGTTATGATTGTAAGCATACTTTTATTTTCGCTTACAGGATGGAATAATATATGGCAAAGAATTTTATATAGAATAATA TTATTACCTGTAGTTTCAGGGGTAACCTATGAAATTATAAAATGGTTAGGTAAAAGCAATAGTAATTTTGCAAAAATTAT AGCATATCCAGGGCTTATGTTACAAAAACTAACAACTAAAGAACCTGACTTAAGGCAATTGGAAGTAGCTATAATGGCTT TAAAAGCAGCAGAAGGAATTGAAAGTTCAATGGAGTGA
Upstream 100 bases:
>100_bases AAGAAATCTGACCCAGTAGTATTAATAGGGGCACAAGAGTCTTATGAAGCTAGATGTAGGAAGTGTCATCGTGTTCCAAG ATAAGTAATGAGGTGATTAA
Downstream 100 bases:
>100_bases TGTTAATTTGATATTAAAAGATTTACTAATAGAAGGATATGGTGTTTTAAAAAAAGCATCTATAGGTAGCTATCAAATAG ATGCTCAACTTTTATTAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MGKSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASF FEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYI LLISNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII LLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGIESSME
Sequences:
>Translated_305_residues MGKSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASF FEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYI LLISNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII LLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGIESSME >Mature_304_residues GKSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASFF EEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYIL LISNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRIIL LPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGIESSME
Specific function: Unknown
COG id: COG3872
COG function: function code R; Predicted metal-dependent enzyme
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010787 - ProDom: PD131510 [H]
Pfam domain/function: PF07136 DUF1385 [H]
EC number: NA
Molecular weight: Translated: 34889; Mature: 34758
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGF CCCCCCCCHHHHHHHHHHCCCCCHHHHHEECCCCEEEECCCCCCCCHHHHHHHHHHHHHH VSLIESLVIGIQTLNYSASFFEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH VFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYILLISNMEDIKRVFQYHGAEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC KTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII CEEEEECCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGI HHHHHCCHHHHHHHHHCCCCCCCEEHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ESSME HHCCC >Mature Secondary Structure GKSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGF CCCCCCCHHHHHHHHHHCCCCCHHHHHEECCCCEEEECCCCCCCCHHHHHHHHHHHHHH VSLIESLVIGIQTLNYSASFFEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH VFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYILLISNMEDIKRVFQYHGAEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC KTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII CEEEEECCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGI HHHHHCCHHHHHHHHHCCCCCCCEEHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ESSME HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]